Strain Fitness in Pantoea sp. MT58 around IAI47_14755

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
3,112,084	+		IAI47_14745	0.57	+0.1
3,112,085	-		IAI47_14745	0.57	-1.4
3,112,085	-		IAI47_14745	0.57	-0.3
3,112,085	-		IAI47_14745	0.57	-0.2
3,112,232	+		IAI47_14745	0.72	+0.5
3,112,232	+		IAI47_14745	0.72	-0.2
3,112,233	-		IAI47_14745	0.72	-0.6
3,112,233	-		IAI47_14745	0.72	-0.3
3,112,246	+		IAI47_14745	0.74	+1.4
3,112,246	+		IAI47_14745	0.74	+1.3
3,112,246	+		IAI47_14745	0.74	+1.2
3,112,247	-		IAI47_14745	0.74	+0.8
3,112,247	-		IAI47_14745	0.74	-0.4
3,112,247	-		IAI47_14745	0.74	-1.3
3,112,247	-		IAI47_14745	0.74	-0.6
3,112,247	-		IAI47_14745	0.74	-1.8
3,112,247	-		IAI47_14745	0.74	+1.4
3,112,308	+		IAI47_14745	0.80	+0.4
3,112,309	-		IAI47_14745	0.80	+0.4
3,112,309	-		IAI47_14745	0.80	-0.5
3,112,309	-		IAI47_14745	0.80	+1.1
3,112,378	-		IAI47_14745	0.87	-2.0
3,112,452	+				+1.4
3,112,452	+				-0.5
3,112,453	-				+0.5
3,112,471	+				+1.4
3,112,471	+				-0.8
3,112,472	-				-2.4
3,112,472	-				+0.4
3,112,472	-				+2.8
3,112,472	-				+0.1
3,112,490	+				-0.7
3,112,491	-				+0.0
3,112,491	-				+0.1
3,112,538	+				+0.8
3,112,538	+				-0.6
3,112,539	-				+0.0
3,112,539	-				+0.4
3,112,539	-				-0.1
3,112,549	+				-0.2
3,112,549	+				+0.8
3,112,550	-				-0.8
3,112,550	-				-0.2
3,112,550	-				+0.4
3,112,561	+				-0.7
3,112,588	+				-1.0
3,112,589	-				+3.6
3,112,589	-				+0.8
3,112,589	-				-0.2
3,112,619	+		IAI47_14750	0.12	-2.4
3,112,619	+		IAI47_14750	0.12	-1.0
3,112,620	-		IAI47_14750	0.12	+0.3
3,112,620	-		IAI47_14750	0.12	+0.8
3,112,620	-		IAI47_14750	0.12	-0.1
3,112,620	-		IAI47_14750	0.12	-0.2
3,112,620	-		IAI47_14750	0.12	-0.6
3,112,620	-		IAI47_14750	0.12	-0.1
3,112,634	+		IAI47_14750	0.15	+1.3
3,112,634	+		IAI47_14750	0.15	-0.7
3,112,635	-		IAI47_14750	0.15	+0.8
3,112,635	-		IAI47_14750	0.15	-0.6
3,112,694	+		IAI47_14750	0.27	-0.9
3,112,694	+		IAI47_14750	0.27	-1.1
3,112,695	-		IAI47_14750	0.27	+0.4
3,112,695	-		IAI47_14750	0.27	-0.6
3,112,695	-		IAI47_14750	0.27	-0.5
3,112,703	+		IAI47_14750	0.29	+1.6
3,112,704	-		IAI47_14750	0.29	-0.1
3,112,766	+		IAI47_14750	0.42	-1.0
3,112,766	+		IAI47_14750	0.42	-0.6
3,112,767	-		IAI47_14750	0.42	-1.2
3,112,767	-		IAI47_14750	0.42	-0.6
3,112,781	+		IAI47_14750	0.45	-1.2
3,112,799	+		IAI47_14750	0.48	-0.2
3,112,800	-		IAI47_14750	0.48	-0.1
3,112,800	-		IAI47_14750	0.48	+0.8
3,112,800	-		IAI47_14750	0.48	+0.4
3,112,800	-		IAI47_14750	0.48	+1.0
3,112,800	-		IAI47_14750	0.48	-1.1
3,112,800	-		IAI47_14750	0.48	-1.4
3,112,815	+		IAI47_14750	0.52	-1.3
3,112,823	+		IAI47_14750	0.53	-0.5
3,112,849	+		IAI47_14750	0.58	+0.5
3,112,849	+		IAI47_14750	0.58	-0.4
3,112,849	+		IAI47_14750	0.58	-0.3
3,112,865	+		IAI47_14750	0.62	-0.5
3,112,888	+		IAI47_14750	0.66	-0.3
3,112,889	-		IAI47_14750	0.66	-1.2
3,112,949	+		IAI47_14750	0.79	-0.7
3,112,950	-		IAI47_14750	0.79	+0.4
3,112,971	+		IAI47_14750	0.83	-1.2
3,112,972	-		IAI47_14750	0.83	-0.8
3,113,045	+				-1.0
3,113,046	-				-0.9
3,113,046	-				+1.4
3,113,049	+				+0.6
3,113,049	+				+0.1
3,113,049	+				-0.4
3,113,050	-				-0.2
3,114,022	-				-1.2
3,114,079	-				-1.6