Strain Fitness in Pantoea sp. MT58 around IAI47_14010

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,961,635	+				-1.8
2,961,635	+				-0.2
2,962,258	+				-0.8
2,962,259	-				+0.2
2,962,259	-				-0.2
2,962,259	-				-0.2
2,962,281	+				-1.5
2,962,281	+				+0.1
2,962,281	+				-1.5
2,962,281	+				-0.1
2,962,281	+				-0.2
2,962,281	+				-1.7
2,962,281	+				+0.8
2,962,281	+				-0.2
2,962,281	+				-0.5
2,962,281	+				-1.0
2,962,281	+				+0.6
2,962,281	+				-0.6
2,962,281	+				-0.6
2,962,281	+				-1.5
2,962,281	+				-0.2
2,962,281	+				+0.8
2,962,281	+				-0.2
2,962,281	+				+0.2
2,962,281	+				+0.5
2,962,282	-				+1.2
2,962,282	-				+0.1
2,962,282	-				+1.1
2,962,282	-				+0.1
2,962,282	-				+1.1
2,962,282	-				-0.6
2,962,282	-				-0.2
2,962,282	-				+2.4
2,962,282	-				-1.1
2,962,282	-				+2.8
2,962,282	-				-0.0
2,962,282	-				+0.5
2,962,282	-				+0.4
2,962,282	-				+1.3
2,962,282	-				+0.8
2,962,282	-				+0.6
2,962,282	-				+1.4
2,962,282	-				-1.2
2,962,282	-				+0.5
2,962,283	+				+0.2
2,962,283	+				+0.8
2,962,323	-				+0.9
2,962,337	-				+0.8
2,962,339	+				-0.5
2,962,339	+				-0.5
2,962,340	-				+0.2
2,962,370	+				-0.1
2,962,370	+				+1.1
2,962,370	+				+1.0
2,962,370	+				+0.2
2,962,370	+				+1.0
2,962,370	+				+1.2
2,962,412	+		IAI47_14015	0.16	+0.1
2,962,412	+		IAI47_14015	0.16	+1.0
2,962,412	+		IAI47_14015	0.16	-0.0
2,962,412	+		IAI47_14015	0.16	+0.7
2,962,412	+		IAI47_14015	0.16	-0.3
2,962,412	+		IAI47_14015	0.16	-1.2
2,962,412	+		IAI47_14015	0.16	-0.2
2,962,430	+		IAI47_14015	0.21	+1.2
2,962,430	+		IAI47_14015	0.21	-0.3
2,962,430	+		IAI47_14015	0.21	+1.4
2,962,430	+		IAI47_14015	0.21	-1.4
2,962,430	+		IAI47_14015	0.21	-1.5
2,962,467	+		IAI47_14015	0.33	+0.2
2,962,467	+		IAI47_14015	0.33	-0.3
2,962,467	+		IAI47_14015	0.33	+1.5
2,962,487	+		IAI47_14015	0.39	+1.2
2,962,543	+		IAI47_14015	0.57	-0.2
2,962,574	+		IAI47_14015	0.67	+0.6
2,962,574	+		IAI47_14015	0.67	+0.9
2,962,574	+		IAI47_14015	0.67	-0.3
2,962,653	+				+0.9
2,962,653	+				+0.3
2,962,653	+				-0.8
2,962,653	+				-1.8
2,962,653	+				+0.2
2,962,653	+				+3.6
2,962,653	+				+0.7
2,962,653	+				+0.1
2,962,742	+		IAI47_14020	0.13	+0.2
2,962,742	+		IAI47_14020	0.13	-0.6
2,962,749	+		IAI47_14020	0.14	-0.8
2,962,749	+		IAI47_14020	0.14	-0.0
2,962,772	+		IAI47_14020	0.19	+0.2
2,962,772	+		IAI47_14020	0.19	-0.7
2,962,772	+		IAI47_14020	0.19	+0.3
2,962,814	+		IAI47_14020	0.28	+0.8
2,962,826	+		IAI47_14020	0.30	-1.7
2,962,883	+		IAI47_14020	0.42	+0.1
2,962,904	+		IAI47_14020	0.47	-0.6
2,963,021	+		IAI47_14020	0.72	-1.1
2,963,120	+				+0.4
2,963,120	+				+0.5
2,963,120	+				+0.8
2,963,139	+				-0.1
2,963,139	+				-1.2
2,963,182	+				-0.3
2,963,182	+				+0.4
2,963,182	+				-0.1