Strain Fitness in Pantoea sp. MT58 around IAI47_10960

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,315,669	-				-1.6
2,315,669	-				-2.5
2,315,669	-				-1.1
2,315,669	-				-0.1
2,315,669	-				+0.3
2,315,768	-		IAI47_10965	0.20	+0.3
2,315,827	-				+1.0
2,315,827	-				+0.5
2,315,827	-				+1.4
2,315,827	-				-0.3
2,315,827	-				+0.4
2,315,827	-				-1.1
2,315,827	-				-1.5
2,315,827	-				-0.0
2,315,829	-				-0.4
2,315,829	-				-0.1
2,315,829	-				-0.4
2,315,837	-				-0.7
2,315,840	-				-0.5
2,315,840	-				-0.2
2,315,840	-				+1.0
2,315,878	+				+0.4
2,315,883	+				-0.9
2,315,884	-				+0.1
2,315,892	+				-2.7