Strain Fitness in Pantoea sp. MT58 around IAI47_10950

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
2,311,005	+		IAI47_10945	0.25	+1.0
2,311,006	-		IAI47_10945	0.25	+1.0
2,311,041	+		IAI47_10945	0.29	+0.2
2,311,049	+		IAI47_10945	0.30	+1.0
2,311,050	-		IAI47_10945	0.30	-0.9
2,311,208	+		IAI47_10945	0.46	-0.3
2,311,208	+		IAI47_10945	0.46	+0.5
2,311,208	+		IAI47_10945	0.46	-1.9
2,311,209	-		IAI47_10945	0.46	+0.2
2,311,209	-		IAI47_10945	0.46	+0.3
2,311,244	+		IAI47_10945	0.49	+1.1
2,311,245	-		IAI47_10945	0.50	+1.7
2,311,356	+		IAI47_10945	0.61	+0.3
2,311,356	+		IAI47_10945	0.61	-0.5
2,311,356	+		IAI47_10945	0.61	+1.0
2,311,517	-		IAI47_10945	0.77	-0.4
2,311,668	+				+0.3
2,311,668	+				-0.1
2,311,668	+				+1.0
2,311,669	-				-0.2
2,311,669	-				-0.1
2,311,669	-				+0.4
2,311,740	+				-0.9
2,311,740	+				-0.4
2,311,740	+				-0.1
2,311,741	-				-0.3
2,311,741	-				-0.6
2,311,741	-				-0.3
2,311,741	-				+0.9
2,311,741	-				-0.1
2,311,750	+				-1.0
2,311,750	+				+0.3
2,311,751	-				-0.5
2,311,751	-				-0.7
2,311,751	-				+0.7
2,311,776	+				+1.1
2,311,776	+				+0.4
2,311,776	+				+1.2
2,311,777	-				+0.1
2,311,838	+				+0.3
2,311,950	-		IAI47_10950	0.10	-0.1