Strain Fitness in Pantoea sp. MT58 around IAI47_08495

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,797,893	-		IAI47_08490	0.32	-0.3
1,797,917	-		IAI47_08490	0.35	+0.3
1,797,917	-		IAI47_08490	0.35	+0.5
1,797,921	+		IAI47_08490	0.35	+0.1
1,797,922	-		IAI47_08490	0.35	-0.4
1,797,940	-		IAI47_08490	0.37	+0.1
1,797,948	+		IAI47_08490	0.38	+0.5
1,797,948	+		IAI47_08490	0.38	-0.2
1,797,949	-		IAI47_08490	0.38	+0.3
1,797,958	+		IAI47_08490	0.39	+1.1
1,797,958	+		IAI47_08490	0.39	-0.5
1,797,958	+		IAI47_08490	0.39	-0.4
1,797,958	+		IAI47_08490	0.39	-0.3
1,797,958	+		IAI47_08490	0.39	+1.6
1,797,959	-		IAI47_08490	0.39	-1.6
1,797,959	-		IAI47_08490	0.39	-0.6
1,797,959	-		IAI47_08490	0.39	-0.9
1,797,959	-		IAI47_08490	0.39	+1.9
1,797,959	-		IAI47_08490	0.39	-0.5
1,797,975	+		IAI47_08490	0.41	+0.5
1,797,975	+		IAI47_08490	0.41	+1.2
1,797,979	+		IAI47_08490	0.42	-0.4
1,797,979	+		IAI47_08490	0.42	-1.2
1,797,980	-		IAI47_08490	0.42	+2.3
1,797,980	-		IAI47_08490	0.42	-0.4
1,797,980	-		IAI47_08490	0.42	+0.4
1,798,032	+		IAI47_08490	0.48	+0.3
1,798,070	-		IAI47_08490	0.52	-1.3
1,798,211	+		IAI47_08490	0.68	+0.3
1,798,211	+		IAI47_08490	0.68	-0.1
1,798,211	+		IAI47_08490	0.68	-0.2
1,798,211	+		IAI47_08490	0.68	+0.5
1,798,211	+		IAI47_08490	0.68	-1.5
1,798,460	+				-0.8
1,798,460	+				-0.7
1,798,461	-				+0.2
1,798,461	-				+0.0
1,798,485	+				-1.6
1,798,491	+				+0.6
1,798,492	-				-0.8
1,798,492	-				-0.7
1,798,492	-				-0.5
1,798,505	+				+3.1
1,798,505	+				+0.2
1,798,506	-				+0.3
1,798,527	+				+1.3
1,798,527	+				-0.8
1,798,527	+				-0.6
1,798,527	+				+0.8
1,798,527	+				+1.8
1,798,528	-				-1.0
1,798,559	+				+0.2
1,798,559	+				+0.6
1,798,559	+				-0.6
1,798,559	+				-1.1
1,798,559	+				-0.8
1,798,559	+				+0.2
1,798,559	+				-0.6
1,798,559	+				+0.3
1,798,559	+				+1.8
1,798,559	+				-0.8
1,798,559	+				+0.4
1,798,560	-				-0.3
1,798,560	-				+0.0
1,798,560	-				-0.6
1,798,560	-				-0.5
1,798,560	-				+0.1
1,798,560	-				-0.3
1,798,560	-				-2.4
1,798,560	-				-0.3
1,798,561	+				+1.0
1,798,621	+				-1.7
1,798,701	+				-0.8
1,798,701	+				+1.1
1,798,701	+				+1.3
1,798,701	+				-0.5
1,798,702	-				-0.1
1,798,702	-				+1.5
1,798,702	-				+0.8
1,798,702	-				-1.4
1,798,702	-				+1.2
1,798,702	-				-0.8
1,798,721	+				+0.4
1,798,721	+				+0.3
1,798,721	+				-0.0
1,798,721	+				+1.1
1,798,721	+				+0.9
1,798,722	-				+0.4
1,798,722	-				+0.0
1,798,722	-				-0.5
1,798,748	+				+0.2
1,798,769	+				-0.1
1,798,769	+				+0.6
1,799,386	+		IAI47_08495	0.36	-0.6
1,800,329	-				-0.9
1,800,332	+				+0.3
1,800,332	+				-0.2
1,800,332	+				-0.3
1,800,332	+				-0.6
1,800,332	+				+0.5
1,800,332	+				+1.6
1,800,332	+				+1.0
1,800,333	-				+1.5
1,800,333	-				+2.1
1,800,333	-				-0.3
1,800,333	-				+1.5
1,800,333	-				-1.7
1,800,333	-				+1.4
1,800,343	+				+0.2
1,800,343	+				-1.2
1,800,343	+				+0.1
1,800,344	-				-0.8
1,800,344	-				-1.2
1,800,376	+				+0.0
1,800,400	-				+0.4
1,800,437	+				+0.8
1,800,461	+				+0.5
1,800,461	+				-0.8
1,800,461	+				+0.3
1,800,461	+				-0.3
1,800,461	+				-0.2
1,800,461	+				-0.1
1,800,461	+				-1.1
1,800,461	+				+0.5
1,800,462	-				-0.3
1,800,462	-				+0.1
1,800,462	-				+0.1
1,800,462	-				-0.6
1,800,462	-				+0.2
1,800,462	-				-0.3
1,800,462	-				+0.4
1,800,467	-				-0.1
1,800,479	+				+0.9
1,800,514	+				-0.4
1,800,515	-				-0.1
1,800,526	+				+1.8
1,800,527	-				+0.3
1,800,765	+		IAI47_08500	0.34	+0.8
1,800,765	+		IAI47_08500	0.34	+0.8
1,800,765	+		IAI47_08500	0.34	-0.1
1,800,765	+		IAI47_08500	0.34	+0.4
1,800,769	+		IAI47_08500	0.35	+1.1
1,800,783	+		IAI47_08500	0.37	+0.2
1,800,818	-		IAI47_08500	0.43	+1.6
1,800,906	+		IAI47_08500	0.56	-0.3
1,800,923	+		IAI47_08500	0.59	+1.3
1,800,923	+		IAI47_08500	0.59	-1.1
1,800,924	-		IAI47_08500	0.59	+0.8
1,800,924	-		IAI47_08500	0.59	-0.7
1,800,924	-		IAI47_08500	0.59	-0.8
1,801,049	+		IAI47_08500	0.79	+1.1
1,801,049	+		IAI47_08500	0.79	-0.3
1,801,049	+		IAI47_08500	0.79	-0.5
1,801,049	+		IAI47_08500	0.79	+0.3
1,801,050	-		IAI47_08500	0.79	-2.1
1,801,050	-		IAI47_08500	0.79	-0.4
1,801,050	-		IAI47_08500	0.79	-2.2
1,801,050	-		IAI47_08500	0.79	+0.3
1,801,050	-		IAI47_08500	0.79	-0.1
1,801,050	-		IAI47_08500	0.79	-0.4
1,801,050	-		IAI47_08500	0.79	+1.6
1,801,050	-		IAI47_08500	0.79	+1.2
1,801,059	-		IAI47_08500	0.80	+0.8
1,801,059	-		IAI47_08500	0.80	-1.6
1,801,181	+				-1.0
1,801,181	+				-0.3
1,801,181	+				+0.2
1,801,181	+				+0.3
1,801,181	+				-0.7
1,801,181	+				+0.2
1,801,181	+				+0.3
1,801,181	+				-0.2
1,801,182	-				+0.3
1,801,182	-				-0.2
1,801,182	-				+0.9
1,801,182	-				+0.5
1,801,182	-				+0.4
1,801,182	-				+0.4
1,801,185	+				+0.4
1,801,185	+				-0.8
1,801,185	+				-0.2
1,801,185	+				+0.8
1,801,185	+				-0.4
1,801,186	-				+0.6
1,801,186	-				+0.3
1,801,186	-				-2.6
1,801,186	-				+0.6
1,801,213	+				-1.4
1,801,214	-				+0.8
1,801,280	+				+0.6