Strain Fitness in Pantoea sp. MT58 around IAI47_06255

Experiment: Ying_all64 rep A; time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 1
1,270,947	+		IAI47_06245	0.80	+0.7
1,271,030	-				-0.3
1,271,047	+				-1.3
1,271,104	+				+1.1
1,271,104	+				-0.4
1,271,104	+				+0.4
1,271,109	+				+0.4
1,271,122	+				-0.9
1,271,123	-				-0.3
1,271,123	-				-1.8
1,271,123	-				+0.1
1,271,165	+				-0.6
1,271,166	-				-0.9
1,271,208	+		IAI47_06250	0.11	-0.8
1,271,208	+		IAI47_06250	0.11	-0.8
1,271,208	+		IAI47_06250	0.11	-1.2
1,271,209	-		IAI47_06250	0.11	-0.4
1,271,214	-		IAI47_06250	0.12	-0.7
1,271,214	-		IAI47_06250	0.12	-0.4
1,271,223	+		IAI47_06250	0.13	-0.4
1,271,223	+		IAI47_06250	0.13	-1.0
1,271,223	+		IAI47_06250	0.13	-0.8
1,271,224	-		IAI47_06250	0.13	-0.1
1,271,228	+		IAI47_06250	0.14	+0.7
1,271,229	-		IAI47_06250	0.14	+0.3
1,271,333	+		IAI47_06250	0.30	-0.1
1,271,333	+		IAI47_06250	0.30	+0.9
1,271,334	-		IAI47_06250	0.30	+0.0
1,271,354	+		IAI47_06250	0.33	-0.3
1,271,354	+		IAI47_06250	0.33	+0.8
1,271,354	+		IAI47_06250	0.33	+0.7
1,271,354	+		IAI47_06250	0.33	+0.5
1,271,354	+		IAI47_06250	0.33	-1.0
1,271,354	+		IAI47_06250	0.33	+1.0
1,271,354	+		IAI47_06250	0.33	-0.6
1,271,354	+		IAI47_06250	0.33	-0.5
1,271,355	-		IAI47_06250	0.33	-1.6
1,271,355	-		IAI47_06250	0.33	+0.1
1,271,355	-		IAI47_06250	0.33	+1.3
1,271,355	-		IAI47_06250	0.33	+0.2
1,271,355	-		IAI47_06250	0.33	+1.1
1,271,355	-		IAI47_06250	0.33	+0.2
1,271,355	-		IAI47_06250	0.33	-0.5
1,271,355	-		IAI47_06250	0.33	-0.4
1,271,368	+		IAI47_06250	0.35	+0.2
1,271,403	+		IAI47_06250	0.40	-1.0
1,271,403	+		IAI47_06250	0.40	+3.0
1,271,403	+		IAI47_06250	0.40	-0.8
1,271,403	+		IAI47_06250	0.40	-0.4
1,271,403	+		IAI47_06250	0.40	+0.1
1,271,496	+		IAI47_06250	0.54	-0.0
1,271,522	+		IAI47_06250	0.58	-0.9
1,271,523	-		IAI47_06250	0.58	-0.2
1,271,585	+		IAI47_06250	0.68	-0.4
1,271,585	+		IAI47_06250	0.68	+0.3
1,271,585	+		IAI47_06250	0.68	+1.4
1,271,585	+		IAI47_06250	0.68	-0.3
1,271,585	+		IAI47_06250	0.68	+0.4
1,271,585	+		IAI47_06250	0.68	-0.2
1,271,585	+		IAI47_06250	0.68	+0.5
1,271,585	+		IAI47_06250	0.68	-0.3
1,271,586	-		IAI47_06250	0.68	-0.1
1,271,586	-		IAI47_06250	0.68	+0.1
1,271,586	-		IAI47_06250	0.68	+0.9
1,271,586	-		IAI47_06250	0.68	+0.2
1,271,586	-		IAI47_06250	0.68	+0.7
1,271,586	-		IAI47_06250	0.68	-0.6
1,271,586	-		IAI47_06250	0.68	-0.3
1,271,586	-		IAI47_06250	0.68	-0.3
1,271,586	-		IAI47_06250	0.68	+0.7
1,271,586	-		IAI47_06250	0.68	-0.3
1,271,586	-		IAI47_06250	0.68	+0.9
1,271,586	-		IAI47_06250	0.68	+0.7
1,271,586	-		IAI47_06250	0.68	+0.4
1,271,632	+		IAI47_06250	0.75	+2.3
1,271,633	-		IAI47_06250	0.75	-0.6
1,271,652	+		IAI47_06250	0.78	+0.4
1,271,661	+		IAI47_06250	0.79	+1.0
1,271,720	+		IAI47_06250	0.88	-0.5
1,271,777	+				+1.2
1,271,777	+				+1.5
1,271,797	-				+2.1
1,271,814	+				-0.1
1,271,855	+				-0.9
1,271,855	+				-0.2
1,271,869	+				-1.3
1,271,869	+				-0.0
1,271,869	+				-1.5
1,272,865	+				-0.9
1,272,865	+				-1.5
1,272,865	+				-0.2
1,272,891	+				-0.7
1,272,891	+				+0.2
1,272,891	+				-0.7
1,272,891	+				-0.3
1,272,904	+				+0.8
1,272,904	+				-1.1
1,272,906	+				-1.0
1,272,929	+				+0.0
1,272,929	+				-0.5
1,272,929	+				+2.2
1,272,931	+				-1.6
1,272,931	+				+0.8
1,272,931	+				+0.5
1,272,931	+				+0.2
1,272,931	+				-1.0
1,272,931	+				+0.0
1,272,931	+				-1.0
1,272,931	+				-0.1
1,272,935	+				-1.3
1,272,935	+				-0.2
1,272,935	+				+0.3
1,272,951	+				+1.4
1,272,951	+				-0.7
1,272,951	+				-0.5