Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02956

Experiment: Adenosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02955 and MPMX20_02956 overlap by 29 nucleotidesMPMX20_02956 and MPMX20_02957 overlap by 20 nucleotides MPMX20_02955: MPMX20_02955 - putative inner membrane transporter YedA, at 3,081,340 to 3,082,254 _02955 MPMX20_02956: MPMX20_02956 - Very short patch repair protein, at 3,082,226 to 3,082,717 _02956 MPMX20_02957: MPMX20_02957 - DNA-cytosine methyltransferase, at 3,082,698 to 3,084,113 _02957 Position (kb) 3082 3083Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3081.266 kb on + strandat 3081.266 kb on + strandat 3081.274 kb on - strandat 3081.274 kb on - strandat 3081.343 kb on - strandat 3081.343 kb on - strandat 3081.395 kb on - strandat 3081.435 kb on + strand, within MPMX20_02955at 3081.515 kb on + strand, within MPMX20_02955at 3081.548 kb on + strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.551 kb on - strand, within MPMX20_02955at 3081.598 kb on - strand, within MPMX20_02955at 3081.598 kb on - strand, within MPMX20_02955at 3081.667 kb on + strand, within MPMX20_02955at 3081.716 kb on + strand, within MPMX20_02955at 3081.717 kb on + strand, within MPMX20_02955at 3081.736 kb on - strand, within MPMX20_02955at 3081.743 kb on + strand, within MPMX20_02955at 3081.753 kb on + strand, within MPMX20_02955at 3081.772 kb on - strand, within MPMX20_02955at 3081.838 kb on + strand, within MPMX20_02955at 3081.905 kb on + strand, within MPMX20_02955at 3081.936 kb on - strand, within MPMX20_02955at 3081.956 kb on + strand, within MPMX20_02955at 3081.989 kb on + strand, within MPMX20_02955at 3082.002 kb on - strand, within MPMX20_02955at 3082.093 kb on - strand, within MPMX20_02955at 3082.168 kb on - strandat 3082.183 kb on - strandat 3082.258 kb on + strandat 3082.345 kb on + strand, within MPMX20_02956at 3082.345 kb on + strand, within MPMX20_02956at 3082.353 kb on - strand, within MPMX20_02956at 3082.370 kb on + strand, within MPMX20_02956at 3082.378 kb on - strand, within MPMX20_02956at 3082.378 kb on - strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.389 kb on + strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.397 kb on - strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.417 kb on + strand, within MPMX20_02956at 3082.430 kb on - strand, within MPMX20_02956at 3082.442 kb on - strand, within MPMX20_02956at 3082.523 kb on + strand, within MPMX20_02956at 3082.546 kb on + strand, within MPMX20_02956at 3082.592 kb on - strand, within MPMX20_02956at 3082.625 kb on - strand, within MPMX20_02956at 3082.686 kb on - strandat 3082.721 kb on - strandat 3082.737 kb on - strandat 3082.749 kb on - strandat 3082.827 kb on + strandat 3082.828 kb on + strandat 3082.828 kb on + strandat 3082.835 kb on - strandat 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.858 kb on + strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.866 kb on - strand, within MPMX20_02957at 3082.873 kb on + strand, within MPMX20_02957at 3082.897 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.907 kb on + strand, within MPMX20_02957at 3082.915 kb on - strand, within MPMX20_02957at 3082.915 kb on - strand, within MPMX20_02957at 3083.005 kb on - strand, within MPMX20_02957at 3083.017 kb on - strand, within MPMX20_02957at 3083.046 kb on + strand, within MPMX20_02957at 3083.135 kb on + strand, within MPMX20_02957at 3083.135 kb on + strand, within MPMX20_02957at 3083.143 kb on - strand, within MPMX20_02957at 3083.197 kb on - strand, within MPMX20_02957at 3083.197 kb on - strand, within MPMX20_02957at 3083.207 kb on + strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.239 kb on - strand, within MPMX20_02957at 3083.242 kb on - strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957at 3083.249 kb on + strand, within MPMX20_02957at 3083.257 kb on - strand, within MPMX20_02957at 3083.257 kb on - strand, within MPMX20_02957at 3083.257 kb on - strand, within MPMX20_02957at 3083.341 kb on + strand, within MPMX20_02957at 3083.341 kb on + strand, within MPMX20_02957at 3083.349 kb on - strand, within MPMX20_02957at 3083.349 kb on - strand, within MPMX20_02957at 3083.349 kb on - strand, within MPMX20_02957at 3083.349 kb on - strand, within MPMX20_02957at 3083.351 kb on - strand, within MPMX20_02957at 3083.378 kb on + strand, within MPMX20_02957at 3083.442 kb on - strand, within MPMX20_02957at 3083.616 kb on + strand, within MPMX20_02957at 3083.624 kb on - strand, within MPMX20_02957at 3083.681 kb on + strand, within MPMX20_02957at 3083.681 kb on + strand, within MPMX20_02957

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Per-strain Table

Position Strand Gene LocusTag Fraction Adenosine (N)
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3,081,266 + -2.3
3,081,266 + +0.0
3,081,274 - -0.0
3,081,274 - -1.7
3,081,343 - -1.4
3,081,343 - -1.5
3,081,395 - -1.4
3,081,435 + MPMX20_02955 0.10 +0.6
3,081,515 + MPMX20_02955 0.19 -0.8
3,081,548 + MPMX20_02955 0.23 +0.1
3,081,551 - MPMX20_02955 0.23 +1.2
3,081,551 - MPMX20_02955 0.23 -1.3
3,081,551 - MPMX20_02955 0.23 -0.1
3,081,551 - MPMX20_02955 0.23 +1.8
3,081,598 - MPMX20_02955 0.28 -0.9
3,081,598 - MPMX20_02955 0.28 -0.5
3,081,667 + MPMX20_02955 0.36 +0.1
3,081,716 + MPMX20_02955 0.41 -0.3
3,081,717 + MPMX20_02955 0.41 +0.2
3,081,736 - MPMX20_02955 0.43 +2.2
3,081,743 + MPMX20_02955 0.44 -1.8
3,081,753 + MPMX20_02955 0.45 -1.1
3,081,772 - MPMX20_02955 0.47 -0.3
3,081,838 + MPMX20_02955 0.54 -0.6
3,081,905 + MPMX20_02955 0.62 -0.8
3,081,936 - MPMX20_02955 0.65 -0.6
3,081,956 + MPMX20_02955 0.67 +0.2
3,081,989 + MPMX20_02955 0.71 -0.1
3,082,002 - MPMX20_02955 0.72 -2.4
3,082,093 - MPMX20_02955 0.82 +0.8
3,082,168 - -0.0
3,082,183 - -1.0
3,082,258 + -0.3
3,082,345 + MPMX20_02956 0.24 -2.3
3,082,345 + MPMX20_02956 0.24 -0.3
3,082,353 - MPMX20_02956 0.26 -0.3
3,082,370 + MPMX20_02956 0.29 +0.2
3,082,378 - MPMX20_02956 0.31 +0.8
3,082,378 - MPMX20_02956 0.31 +0.4
3,082,389 + MPMX20_02956 0.33 +2.6
3,082,389 + MPMX20_02956 0.33 +0.0
3,082,389 + MPMX20_02956 0.33 +2.6
3,082,397 - MPMX20_02956 0.35 -0.5
3,082,397 - MPMX20_02956 0.35 -0.3
3,082,397 - MPMX20_02956 0.35 -0.1
3,082,397 - MPMX20_02956 0.35 -0.2
3,082,417 + MPMX20_02956 0.39 -0.1
3,082,417 + MPMX20_02956 0.39 -0.6
3,082,417 + MPMX20_02956 0.39 -2.2
3,082,417 + MPMX20_02956 0.39 -0.5
3,082,430 - MPMX20_02956 0.41 -1.6
3,082,442 - MPMX20_02956 0.44 -0.3
3,082,523 + MPMX20_02956 0.60 -1.3
3,082,546 + MPMX20_02956 0.65 +1.7
3,082,592 - MPMX20_02956 0.74 +0.5
3,082,625 - MPMX20_02956 0.81 -1.1
3,082,686 - -0.6
3,082,721 - -1.0
3,082,737 - -0.0
3,082,749 - +1.7
3,082,827 + +0.2
3,082,828 + -0.9
3,082,828 + -0.1
3,082,835 - +0.5
3,082,858 + MPMX20_02957 0.11 -0.6
3,082,858 + MPMX20_02957 0.11 +0.5
3,082,858 + MPMX20_02957 0.11 -1.0
3,082,858 + MPMX20_02957 0.11 -0.9
3,082,858 + MPMX20_02957 0.11 -3.0
3,082,858 + MPMX20_02957 0.11 -3.0
3,082,858 + MPMX20_02957 0.11 +0.3
3,082,858 + MPMX20_02957 0.11 -1.2
3,082,866 - MPMX20_02957 0.12 +0.1
3,082,866 - MPMX20_02957 0.12 -1.0
3,082,866 - MPMX20_02957 0.12 +0.3
3,082,866 - MPMX20_02957 0.12 -3.3
3,082,866 - MPMX20_02957 0.12 -1.2
3,082,866 - MPMX20_02957 0.12 -2.4
3,082,866 - MPMX20_02957 0.12 +1.4
3,082,866 - MPMX20_02957 0.12 -1.2
3,082,873 + MPMX20_02957 0.12 +0.6
3,082,897 + MPMX20_02957 0.14 -0.5
3,082,907 + MPMX20_02957 0.15 -1.1
3,082,907 + MPMX20_02957 0.15 +1.1
3,082,907 + MPMX20_02957 0.15 +0.3
3,082,915 - MPMX20_02957 0.15 -1.4
3,082,915 - MPMX20_02957 0.15 -1.2
3,083,005 - MPMX20_02957 0.22 +0.5
3,083,017 - MPMX20_02957 0.23 -0.4
3,083,046 + MPMX20_02957 0.25 -0.3
3,083,135 + MPMX20_02957 0.31 -1.1
3,083,135 + MPMX20_02957 0.31 -1.5
3,083,143 - MPMX20_02957 0.31 +0.2
3,083,197 - MPMX20_02957 0.35 +0.6
3,083,197 - MPMX20_02957 0.35 +0.5
3,083,207 + MPMX20_02957 0.36 +0.9
3,083,239 - MPMX20_02957 0.38 -0.8
3,083,239 - MPMX20_02957 0.38 -0.5
3,083,239 - MPMX20_02957 0.38 -1.9
3,083,242 - MPMX20_02957 0.38 +0.3
3,083,249 + MPMX20_02957 0.39 -0.1
3,083,249 + MPMX20_02957 0.39 -0.6
3,083,249 + MPMX20_02957 0.39 -1.1
3,083,257 - MPMX20_02957 0.39 -2.3
3,083,257 - MPMX20_02957 0.39 +0.7
3,083,257 - MPMX20_02957 0.39 -0.5
3,083,341 + MPMX20_02957 0.45 +1.4
3,083,341 + MPMX20_02957 0.45 -1.4
3,083,349 - MPMX20_02957 0.46 -0.2
3,083,349 - MPMX20_02957 0.46 +0.2
3,083,349 - MPMX20_02957 0.46 -0.7
3,083,349 - MPMX20_02957 0.46 -0.4
3,083,351 - MPMX20_02957 0.46 +0.6
3,083,378 + MPMX20_02957 0.48 -2.9
3,083,442 - MPMX20_02957 0.53 +0.9
3,083,616 + MPMX20_02957 0.65 -0.9
3,083,624 - MPMX20_02957 0.65 -1.4
3,083,681 + MPMX20_02957 0.69 +0.3
3,083,681 + MPMX20_02957 0.69 -0.9

Or see this region's nucleotide sequence