Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02027

Experiment: Parabanic Acid (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02025 and MPMX20_02026 are separated by 54 nucleotidesMPMX20_02026 and MPMX20_02027 are separated by 92 nucleotidesMPMX20_02027 and MPMX20_02028 overlap by 4 nucleotidesMPMX20_02028 and MPMX20_02029 are separated by 39 nucleotides MPMX20_02025: MPMX20_02025 - hypothetical protein, at 2,117,738 to 2,118,106 _02025 MPMX20_02026: MPMX20_02026 - Transcriptional regulatory protein RstA, at 2,118,161 to 2,118,913 _02026 MPMX20_02027: MPMX20_02027 - Inner membrane protein YdgC, at 2,119,006 to 2,119,341 _02027 MPMX20_02028: MPMX20_02028 - Dihydromonapterin reductase, at 2,119,338 to 2,120,060 _02028 MPMX20_02029: MPMX20_02029 - Putative arginine/ornithine antiporter, at 2,120,100 to 2,121,482 _02029 Position (kb) 2119 2120Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 2118.072 kb on - strandat 2118.072 kb on - strandat 2118.121 kb on - strandat 2118.121 kb on - strandat 2118.123 kb on + strandat 2118.138 kb on - strandat 2118.138 kb on - strandat 2118.163 kb on + strandat 2118.168 kb on + strandat 2118.172 kb on - strandat 2118.210 kb on + strandat 2118.210 kb on + strandat 2118.218 kb on - strandat 2118.234 kb on - strandat 2118.242 kb on - strand, within MPMX20_02026at 2118.242 kb on - strand, within MPMX20_02026at 2118.242 kb on - strand, within MPMX20_02026at 2118.282 kb on - strand, within MPMX20_02026at 2118.282 kb on - strand, within MPMX20_02026at 2118.377 kb on - strand, within MPMX20_02026at 2118.426 kb on + strand, within MPMX20_02026at 2118.483 kb on + strand, within MPMX20_02026at 2118.607 kb on - strand, within MPMX20_02026at 2118.660 kb on - strand, within MPMX20_02026at 2118.660 kb on - strand, within MPMX20_02026at 2118.672 kb on - strand, within MPMX20_02026at 2118.710 kb on - strand, within MPMX20_02026at 2118.715 kb on + strand, within MPMX20_02026at 2118.723 kb on - strand, within MPMX20_02026at 2118.763 kb on + strand, within MPMX20_02026at 2118.768 kb on - strand, within MPMX20_02026at 2118.785 kb on - strand, within MPMX20_02026at 2118.795 kb on - strand, within MPMX20_02026at 2118.797 kb on - strand, within MPMX20_02026at 2118.815 kb on - strand, within MPMX20_02026at 2118.830 kb on + strand, within MPMX20_02026at 2118.905 kb on + strandat 2118.905 kb on + strandat 2118.905 kb on + strandat 2118.913 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.920 kb on + strandat 2118.921 kb on + strandat 2118.921 kb on + strandat 2118.921 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.928 kb on - strandat 2118.939 kb on - strandat 2118.978 kb on - strandat 2119.004 kb on + strandat 2119.049 kb on - strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.050 kb on + strand, within MPMX20_02027at 2119.058 kb on - strand, within MPMX20_02027at 2119.058 kb on - strand, within MPMX20_02027at 2119.058 kb on - strand, within MPMX20_02027at 2119.061 kb on - strand, within MPMX20_02027at 2119.065 kb on + strand, within MPMX20_02027at 2119.098 kb on + strand, within MPMX20_02027at 2119.098 kb on + strand, within MPMX20_02027at 2119.106 kb on - strand, within MPMX20_02027at 2119.106 kb on - strand, within MPMX20_02027at 2119.106 kb on - strand, within MPMX20_02027at 2119.107 kb on + strand, within MPMX20_02027at 2119.107 kb on + strand, within MPMX20_02027at 2119.115 kb on - strand, within MPMX20_02027at 2119.116 kb on - strand, within MPMX20_02027at 2119.122 kb on - strand, within MPMX20_02027at 2119.142 kb on - strand, within MPMX20_02027at 2119.150 kb on - strand, within MPMX20_02027at 2119.157 kb on + strand, within MPMX20_02027at 2119.177 kb on + strand, within MPMX20_02027at 2119.178 kb on - strand, within MPMX20_02027at 2119.255 kb on - strand, within MPMX20_02027at 2119.262 kb on + strand, within MPMX20_02027at 2119.262 kb on + strand, within MPMX20_02027at 2119.262 kb on + strand, within MPMX20_02027at 2119.268 kb on - strand, within MPMX20_02027at 2119.270 kb on - strand, within MPMX20_02027at 2119.270 kb on - strand, within MPMX20_02027at 2119.277 kb on + strand, within MPMX20_02027at 2119.289 kb on + strand, within MPMX20_02027at 2119.297 kb on - strand, within MPMX20_02027at 2119.297 kb on - strand, within MPMX20_02027at 2119.301 kb on + strand, within MPMX20_02027at 2119.309 kb on - strandat 2119.309 kb on - strandat 2119.331 kb on + strandat 2119.371 kb on + strandat 2119.372 kb on - strandat 2119.379 kb on - strandat 2119.481 kb on + strand, within MPMX20_02028at 2119.528 kb on + strand, within MPMX20_02028at 2119.553 kb on + strand, within MPMX20_02028at 2119.561 kb on - strand, within MPMX20_02028at 2119.624 kb on + strand, within MPMX20_02028at 2119.684 kb on - strand, within MPMX20_02028at 2119.703 kb on + strand, within MPMX20_02028at 2119.703 kb on + strand, within MPMX20_02028at 2119.703 kb on + strand, within MPMX20_02028at 2119.710 kb on + strand, within MPMX20_02028at 2119.711 kb on - strand, within MPMX20_02028at 2119.711 kb on - strand, within MPMX20_02028at 2119.711 kb on - strand, within MPMX20_02028at 2119.718 kb on - strand, within MPMX20_02028at 2119.755 kb on - strand, within MPMX20_02028at 2119.765 kb on - strand, within MPMX20_02028at 2119.801 kb on - strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.826 kb on + strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.834 kb on - strand, within MPMX20_02028at 2119.860 kb on + strand, within MPMX20_02028at 2119.997 kb on + strandat 2120.016 kb on + strandat 2120.041 kb on - strandat 2120.120 kb on - strandat 2120.137 kb on + strandat 2120.145 kb on - strandat 2120.171 kb on + strandat 2120.219 kb on - strandat 2120.225 kb on - strandat 2120.233 kb on + strandat 2120.267 kb on - strand, within MPMX20_02029at 2120.269 kb on - strand, within MPMX20_02029

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Per-strain Table

Position Strand Gene LocusTag Fraction Parabanic Acid (N)
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2,118,072 - -0.8
2,118,072 - +0.1
2,118,121 - +0.4
2,118,121 - -0.2
2,118,123 + -0.8
2,118,138 - -3.1
2,118,138 - -0.3
2,118,163 + -0.4
2,118,168 + +0.6
2,118,172 - -1.7
2,118,210 + +0.5
2,118,210 + -0.5
2,118,218 - -0.5
2,118,234 - +0.1
2,118,242 - MPMX20_02026 0.11 +0.4
2,118,242 - MPMX20_02026 0.11 -0.2
2,118,242 - MPMX20_02026 0.11 +0.0
2,118,282 - MPMX20_02026 0.16 -1.4
2,118,282 - MPMX20_02026 0.16 +0.5
2,118,377 - MPMX20_02026 0.29 -0.3
2,118,426 + MPMX20_02026 0.35 +1.0
2,118,483 + MPMX20_02026 0.43 -3.2
2,118,607 - MPMX20_02026 0.59 -1.2
2,118,660 - MPMX20_02026 0.66 +0.9
2,118,660 - MPMX20_02026 0.66 -0.7
2,118,672 - MPMX20_02026 0.68 -1.2
2,118,710 - MPMX20_02026 0.73 -0.8
2,118,715 + MPMX20_02026 0.74 -1.7
2,118,723 - MPMX20_02026 0.75 -0.7
2,118,763 + MPMX20_02026 0.80 +0.7
2,118,768 - MPMX20_02026 0.81 +1.9
2,118,785 - MPMX20_02026 0.83 -0.6
2,118,795 - MPMX20_02026 0.84 -2.2
2,118,797 - MPMX20_02026 0.84 +0.1
2,118,815 - MPMX20_02026 0.87 +0.6
2,118,830 + MPMX20_02026 0.89 +0.0
2,118,905 + -0.4
2,118,905 + +0.2
2,118,905 + -0.1
2,118,913 + -0.6
2,118,920 + +0.4
2,118,920 + +0.9
2,118,920 + +0.0
2,118,920 + -0.4
2,118,920 + -1.4
2,118,920 + +0.0
2,118,920 + -1.2
2,118,920 + +0.3
2,118,920 + -0.5
2,118,921 + -0.8
2,118,921 + -0.1
2,118,921 - -0.4
2,118,928 - +1.2
2,118,928 - +1.0
2,118,928 - +1.9
2,118,928 - +1.4
2,118,928 - -0.3
2,118,928 - +0.0
2,118,928 - -0.2
2,118,928 - +0.6
2,118,928 - -0.1
2,118,928 - +0.6
2,118,928 - -0.3
2,118,939 - +0.0
2,118,978 - -0.9
2,119,004 + -0.3
2,119,049 - MPMX20_02027 0.13 -2.3
2,119,050 + MPMX20_02027 0.13 -1.8
2,119,050 + MPMX20_02027 0.13 -1.7
2,119,050 + MPMX20_02027 0.13 -2.7
2,119,050 + MPMX20_02027 0.13 -1.0
2,119,050 + MPMX20_02027 0.13 -1.7
2,119,050 + MPMX20_02027 0.13 +0.0
2,119,050 + MPMX20_02027 0.13 -2.7
2,119,050 + MPMX20_02027 0.13 +0.4
2,119,050 + MPMX20_02027 0.13 +0.0
2,119,058 - MPMX20_02027 0.15 +2.0
2,119,058 - MPMX20_02027 0.15 -2.4
2,119,058 - MPMX20_02027 0.15 -1.4
2,119,061 - MPMX20_02027 0.16 -2.1
2,119,065 + MPMX20_02027 0.18 -1.8
2,119,098 + MPMX20_02027 0.27 -1.6
2,119,098 + MPMX20_02027 0.27 -0.8
2,119,106 - MPMX20_02027 0.30 -3.6
2,119,106 - MPMX20_02027 0.30 -3.2
2,119,106 - MPMX20_02027 0.30 -1.2
2,119,107 + MPMX20_02027 0.30 -4.3
2,119,107 + MPMX20_02027 0.30 -0.6
2,119,115 - MPMX20_02027 0.32 -1.0
2,119,116 - MPMX20_02027 0.33 -0.6
2,119,122 - MPMX20_02027 0.35 -1.0
2,119,142 - MPMX20_02027 0.40 -0.4
2,119,150 - MPMX20_02027 0.43 +0.0
2,119,157 + MPMX20_02027 0.45 -2.9
2,119,177 + MPMX20_02027 0.51 -0.5
2,119,178 - MPMX20_02027 0.51 -0.6
2,119,255 - MPMX20_02027 0.74 -1.7
2,119,262 + MPMX20_02027 0.76 -1.3
2,119,262 + MPMX20_02027 0.76 -2.3
2,119,262 + MPMX20_02027 0.76 -0.5
2,119,268 - MPMX20_02027 0.78 -1.5
2,119,270 - MPMX20_02027 0.79 -0.4
2,119,270 - MPMX20_02027 0.79 -0.6
2,119,277 + MPMX20_02027 0.81 -1.1
2,119,289 + MPMX20_02027 0.84 -2.0
2,119,297 - MPMX20_02027 0.87 -0.8
2,119,297 - MPMX20_02027 0.87 -3.2
2,119,301 + MPMX20_02027 0.88 -2.8
2,119,309 - -2.4
2,119,309 - -4.1
2,119,331 + -1.2
2,119,371 + +1.6
2,119,372 - -0.1
2,119,379 - +0.2
2,119,481 + MPMX20_02028 0.20 -2.1
2,119,528 + MPMX20_02028 0.26 -0.4
2,119,553 + MPMX20_02028 0.30 +0.6
2,119,561 - MPMX20_02028 0.31 -0.0
2,119,624 + MPMX20_02028 0.40 +1.6
2,119,684 - MPMX20_02028 0.48 +1.3
2,119,703 + MPMX20_02028 0.50 +0.8
2,119,703 + MPMX20_02028 0.50 +0.5
2,119,703 + MPMX20_02028 0.50 -1.6
2,119,710 + MPMX20_02028 0.51 -1.2
2,119,711 - MPMX20_02028 0.52 +0.5
2,119,711 - MPMX20_02028 0.52 -0.6
2,119,711 - MPMX20_02028 0.52 -0.1
2,119,718 - MPMX20_02028 0.53 +0.3
2,119,755 - MPMX20_02028 0.58 +0.7
2,119,765 - MPMX20_02028 0.59 -0.4
2,119,801 - MPMX20_02028 0.64 +0.7
2,119,826 + MPMX20_02028 0.67 +1.1
2,119,826 + MPMX20_02028 0.67 -1.4
2,119,826 + MPMX20_02028 0.67 -0.1
2,119,826 + MPMX20_02028 0.67 -2.3
2,119,826 + MPMX20_02028 0.67 +1.0
2,119,826 + MPMX20_02028 0.67 -0.5
2,119,834 - MPMX20_02028 0.69 +0.3
2,119,834 - MPMX20_02028 0.69 +1.3
2,119,834 - MPMX20_02028 0.69 -0.1
2,119,834 - MPMX20_02028 0.69 -1.8
2,119,834 - MPMX20_02028 0.69 +1.3
2,119,834 - MPMX20_02028 0.69 +2.3
2,119,860 + MPMX20_02028 0.72 -0.2
2,119,997 + +1.3
2,120,016 + +0.7
2,120,041 - -1.0
2,120,120 - -0.5
2,120,137 + -0.2
2,120,145 - +0.2
2,120,171 + +2.2
2,120,219 - -0.8
2,120,225 - -0.0
2,120,233 + -1.3
2,120,267 - MPMX20_02029 0.12 +0.4
2,120,269 - MPMX20_02029 0.12 +0.3

Or see this region's nucleotide sequence