Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04624 and MPMX20_04625 are separated by 90 nucleotides MPMX20_04625 and MPMX20_04626 are separated by 374 nucleotides MPMX20_04626 and MPMX20_04627 are separated by 100 nucleotides
MPMX20_04624: MPMX20_04624 - Regulatory protein AsnC, at 4,844,300 to 4,844,758
_04624
MPMX20_04625: MPMX20_04625 - Protein MioC, at 4,844,849 to 4,845,298
_04625
MPMX20_04626: MPMX20_04626 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, at 4,845,673 to 4,847,562
_04626
MPMX20_04627: MPMX20_04627 - Ribosomal RNA small subunit methyltransferase G, at 4,847,663 to 4,848,286
_04627
Position (kb)
4845
4846
4847
4848 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4844.856 kb on + strand at 4844.856 kb on + strand at 4844.864 kb on - strand at 4844.864 kb on - strand at 4844.879 kb on + strand at 4844.887 kb on - strand at 4844.887 kb on - strand at 4844.887 kb on - strand at 4844.887 kb on - strand at 4844.887 kb on - strand at 4844.931 kb on - strand, within MPMX20_04625 at 4844.931 kb on - strand, within MPMX20_04625 at 4844.931 kb on - strand, within MPMX20_04625 at 4844.969 kb on - strand, within MPMX20_04625 at 4845.009 kb on + strand, within MPMX20_04625 at 4845.086 kb on - strand, within MPMX20_04625 at 4845.112 kb on + strand, within MPMX20_04625 at 4845.123 kb on + strand, within MPMX20_04625 at 4845.123 kb on + strand, within MPMX20_04625 at 4845.186 kb on + strand, within MPMX20_04625 at 4845.207 kb on - strand, within MPMX20_04625 at 4845.580 kb on + strand at 4845.581 kb on + strand at 4845.589 kb on - strand at 4845.624 kb on + strand at 4845.661 kb on + strand at 4846.179 kb on + strand, within MPMX20_04626 at 4846.179 kb on + strand, within MPMX20_04626 at 4846.221 kb on + strand, within MPMX20_04626 at 4846.223 kb on + strand, within MPMX20_04626 at 4846.413 kb on - strand, within MPMX20_04626 at 4846.457 kb on + strand, within MPMX20_04626 at 4846.483 kb on + strand, within MPMX20_04626 at 4846.557 kb on - strand, within MPMX20_04626 at 4846.654 kb on + strand, within MPMX20_04626 at 4846.654 kb on + strand, within MPMX20_04626 at 4846.660 kb on + strand, within MPMX20_04626 at 4846.767 kb on + strand, within MPMX20_04626 at 4846.803 kb on + strand, within MPMX20_04626 at 4846.869 kb on + strand, within MPMX20_04626 at 4847.043 kb on + strand, within MPMX20_04626 at 4847.060 kb on + strand, within MPMX20_04626 at 4847.101 kb on + strand, within MPMX20_04626 at 4847.216 kb on + strand, within MPMX20_04626 at 4847.327 kb on - strand, within MPMX20_04626 at 4847.407 kb on - strand at 4847.453 kb on + strand at 4847.458 kb on + strand at 4847.503 kb on - strand at 4847.750 kb on + strand, within MPMX20_04627 at 4847.787 kb on - strand, within MPMX20_04627 at 4847.789 kb on + strand, within MPMX20_04627 at 4847.817 kb on + strand, within MPMX20_04627 at 4847.885 kb on + strand, within MPMX20_04627 at 4847.885 kb on + strand, within MPMX20_04627 at 4847.885 kb on + strand, within MPMX20_04627 at 4847.886 kb on + strand, within MPMX20_04627 at 4847.886 kb on + strand, within MPMX20_04627 at 4847.886 kb on + strand, within MPMX20_04627 at 4847.893 kb on - strand, within MPMX20_04627 at 4847.894 kb on - strand, within MPMX20_04627 at 4847.894 kb on - strand, within MPMX20_04627 at 4847.894 kb on - strand, within MPMX20_04627 at 4847.952 kb on + strand, within MPMX20_04627 at 4848.015 kb on + strand, within MPMX20_04627 at 4848.015 kb on + strand, within MPMX20_04627 at 4848.015 kb on + strand, within MPMX20_04627 at 4848.020 kb on + strand, within MPMX20_04627 at 4848.020 kb on + strand, within MPMX20_04627 at 4848.020 kb on + strand, within MPMX20_04627 at 4848.023 kb on - strand, within MPMX20_04627 at 4848.025 kb on + strand, within MPMX20_04627 at 4848.025 kb on + strand, within MPMX20_04627 at 4848.025 kb on - strand, within MPMX20_04627 at 4848.028 kb on - strand, within MPMX20_04627 at 4848.028 kb on - strand, within MPMX20_04627 at 4848.028 kb on - strand, within MPMX20_04627 at 4848.028 kb on - strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.030 kb on + strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.033 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.038 kb on - strand, within MPMX20_04627 at 4848.053 kb on - strand, within MPMX20_04627 at 4848.068 kb on + strand, within MPMX20_04627 at 4848.068 kb on + strand, within MPMX20_04627 at 4848.068 kb on + strand, within MPMX20_04627 at 4848.076 kb on - strand, within MPMX20_04627 at 4848.076 kb on - strand, within MPMX20_04627 at 4848.118 kb on + strand, within MPMX20_04627 at 4848.119 kb on - strand, within MPMX20_04627 at 4848.119 kb on - strand, within MPMX20_04627 at 4848.126 kb on - strand, within MPMX20_04627 at 4848.221 kb on + strand, within MPMX20_04627 at 4848.238 kb on + strand at 4848.238 kb on + strand at 4848.238 kb on + strand at 4848.238 kb on + strand at 4848.244 kb on + strand at 4848.246 kb on - strand at 4848.246 kb on - strand at 4848.253 kb on - strand at 4848.253 kb on - strand at 4848.259 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.317 kb on + strand at 4848.325 kb on - strand at 4848.325 kb on - strand at 4848.325 kb on - strand at 4848.325 kb on - strand at 4848.325 kb on - strand at 4848.325 kb on - strand at 4848.366 kb on + strand at 4848.374 kb on + strand at 4848.374 kb on - strand at 4848.382 kb on - strand at 4848.406 kb on + strand at 4848.415 kb on + strand at 4848.415 kb on + strand at 4848.433 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 4,844,856 + +1.0 4,844,856 + -0.3 4,844,864 - -1.0 4,844,864 - -0.9 4,844,879 + +0.5 4,844,887 - +1.1 4,844,887 - +0.6 4,844,887 - +0.7 4,844,887 - +2.0 4,844,887 - -0.7 4,844,931 - MPMX20_04625 0.18 +1.0 4,844,931 - MPMX20_04625 0.18 -2.1 4,844,931 - MPMX20_04625 0.18 -0.2 4,844,969 - MPMX20_04625 0.27 -1.1 4,845,009 + MPMX20_04625 0.36 +1.0 4,845,086 - MPMX20_04625 0.53 +0.0 4,845,112 + MPMX20_04625 0.58 -3.4 4,845,123 + MPMX20_04625 0.61 +0.8 4,845,123 + MPMX20_04625 0.61 +1.0 4,845,186 + MPMX20_04625 0.75 +0.7 4,845,207 - MPMX20_04625 0.80 +1.4 4,845,580 + -0.7 4,845,581 + -0.9 4,845,589 - -1.7 4,845,624 + -1.4 4,845,661 + -0.1 4,846,179 + MPMX20_04626 0.27 +1.1 4,846,179 + MPMX20_04626 0.27 -1.3 4,846,221 + MPMX20_04626 0.29 +1.5 4,846,223 + MPMX20_04626 0.29 -1.7 4,846,413 - MPMX20_04626 0.39 +0.7 4,846,457 + MPMX20_04626 0.41 -1.5 4,846,483 + MPMX20_04626 0.43 +0.5 4,846,557 - MPMX20_04626 0.47 -0.5 4,846,654 + MPMX20_04626 0.52 -1.1 4,846,654 + MPMX20_04626 0.52 +0.5 4,846,660 + MPMX20_04626 0.52 -2.2 4,846,767 + MPMX20_04626 0.58 -0.3 4,846,803 + MPMX20_04626 0.60 -1.2 4,846,869 + MPMX20_04626 0.63 -1.0 4,847,043 + MPMX20_04626 0.72 -0.9 4,847,060 + MPMX20_04626 0.73 -0.3 4,847,101 + MPMX20_04626 0.76 +0.5 4,847,216 + MPMX20_04626 0.82 -1.9 4,847,327 - MPMX20_04626 0.88 -0.9 4,847,407 - -2.0 4,847,453 + -2.1 4,847,458 + +2.0 4,847,503 - -0.3 4,847,750 + MPMX20_04627 0.14 -0.9 4,847,787 - MPMX20_04627 0.20 +2.0 4,847,789 + MPMX20_04627 0.20 -0.3 4,847,817 + MPMX20_04627 0.25 -1.0 4,847,885 + MPMX20_04627 0.36 +1.7 4,847,885 + MPMX20_04627 0.36 +0.2 4,847,885 + MPMX20_04627 0.36 +0.4 4,847,886 + MPMX20_04627 0.36 +1.0 4,847,886 + MPMX20_04627 0.36 -0.3 4,847,886 + MPMX20_04627 0.36 -0.3 4,847,893 - MPMX20_04627 0.37 -1.7 4,847,894 - MPMX20_04627 0.37 +0.2 4,847,894 - MPMX20_04627 0.37 -1.0 4,847,894 - MPMX20_04627 0.37 +0.3 4,847,952 + MPMX20_04627 0.46 -0.3 4,848,015 + MPMX20_04627 0.56 -1.2 4,848,015 + MPMX20_04627 0.56 -1.4 4,848,015 + MPMX20_04627 0.56 -1.4 4,848,020 + MPMX20_04627 0.57 -0.6 4,848,020 + MPMX20_04627 0.57 -1.2 4,848,020 + MPMX20_04627 0.57 -1.2 4,848,023 - MPMX20_04627 0.58 +0.0 4,848,025 + MPMX20_04627 0.58 -2.0 4,848,025 + MPMX20_04627 0.58 -1.9 4,848,025 - MPMX20_04627 0.58 +1.1 4,848,028 - MPMX20_04627 0.58 +0.1 4,848,028 - MPMX20_04627 0.58 -2.0 4,848,028 - MPMX20_04627 0.58 -1.3 4,848,028 - MPMX20_04627 0.58 +0.3 4,848,030 + MPMX20_04627 0.59 -1.9 4,848,030 + MPMX20_04627 0.59 -2.0 4,848,030 + MPMX20_04627 0.59 -0.8 4,848,030 + MPMX20_04627 0.59 +0.6 4,848,030 + MPMX20_04627 0.59 -1.1 4,848,030 + MPMX20_04627 0.59 -1.0 4,848,030 + MPMX20_04627 0.59 -2.1 4,848,030 + MPMX20_04627 0.59 -0.2 4,848,030 + MPMX20_04627 0.59 -0.6 4,848,030 + MPMX20_04627 0.59 +0.4 4,848,030 + MPMX20_04627 0.59 -0.9 4,848,030 + MPMX20_04627 0.59 -1.3 4,848,033 - MPMX20_04627 0.59 -0.4 4,848,033 - MPMX20_04627 0.59 -2.7 4,848,033 - MPMX20_04627 0.59 -0.3 4,848,033 - MPMX20_04627 0.59 +0.0 4,848,033 - MPMX20_04627 0.59 +0.2 4,848,033 - MPMX20_04627 0.59 -0.8 4,848,038 - MPMX20_04627 0.60 -1.3 4,848,038 - MPMX20_04627 0.60 -3.0 4,848,038 - MPMX20_04627 0.60 -1.9 4,848,038 - MPMX20_04627 0.60 +0.3 4,848,038 - MPMX20_04627 0.60 +0.5 4,848,038 - MPMX20_04627 0.60 +0.2 4,848,038 - MPMX20_04627 0.60 -0.0 4,848,053 - MPMX20_04627 0.62 -1.4 4,848,068 + MPMX20_04627 0.65 +0.4 4,848,068 + MPMX20_04627 0.65 -0.0 4,848,068 + MPMX20_04627 0.65 -0.2 4,848,076 - MPMX20_04627 0.66 -1.6 4,848,076 - MPMX20_04627 0.66 -1.3 4,848,118 + MPMX20_04627 0.73 +0.5 4,848,119 - MPMX20_04627 0.73 -0.3 4,848,119 - MPMX20_04627 0.73 -3.1 4,848,126 - MPMX20_04627 0.74 +0.5 4,848,221 + MPMX20_04627 0.89 -0.0 4,848,238 + -0.8 4,848,238 + -0.5 4,848,238 + -0.1 4,848,238 + -0.6 4,848,244 + -1.1 4,848,246 - +0.9 4,848,246 - +0.8 4,848,253 - -0.4 4,848,253 - +0.4 4,848,259 + -0.5 4,848,317 + -0.7 4,848,317 + -1.7 4,848,317 + -0.7 4,848,317 + -1.4 4,848,317 + +0.0 4,848,317 + +1.3 4,848,317 + +0.8 4,848,317 + -0.0 4,848,317 + -0.1 4,848,317 + +0.6 4,848,317 + -0.6 4,848,317 + -0.3 4,848,317 + -0.6 4,848,317 + +0.5 4,848,325 - -0.7 4,848,325 - +1.8 4,848,325 - +0.9 4,848,325 - -0.1 4,848,325 - -0.4 4,848,325 - -1.1 4,848,366 + -1.6 4,848,374 + -0.4 4,848,374 - +0.2 4,848,382 - -1.6 4,848,406 + -1.2 4,848,415 + -0.4 4,848,415 + -1.0 4,848,433 + -0.6
Or see this region's nucleotide sequence