Experiment: NAG (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04315 and MPMX20_04316 are separated by 177 nucleotides MPMX20_04316 and MPMX20_04317 are separated by 50 nucleotides MPMX20_04317 and MPMX20_04318 are separated by 3 nucleotides MPMX20_04318 and MPMX20_04319 are separated by 126 nucleotides
MPMX20_04315: MPMX20_04315 - Aspartate-semialdehyde dehydrogenase, at 4,509,576 to 4,510,679
_04315
MPMX20_04316: MPMX20_04316 - hypothetical protein, at 4,510,857 to 4,511,450
_04316
MPMX20_04317: MPMX20_04317 - Low-affinity gluconate transporter, at 4,511,501 to 4,512,841
_04317
MPMX20_04318: MPMX20_04318 - Thermoresistant gluconokinase, at 4,512,845 to 4,513,372
_04318
MPMX20_04319: MPMX20_04319 - HTH-type transcriptional regulator GntR, at 4,513,499 to 4,514,494
_04319
Position (kb)
4511
4512
4513 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4510.705 kb on + strand at 4510.747 kb on - strand at 4510.838 kb on - strand at 4510.838 kb on - strand at 4510.873 kb on - strand at 4510.913 kb on - strand at 4510.940 kb on + strand, within MPMX20_04316 at 4510.953 kb on + strand, within MPMX20_04316 at 4510.961 kb on - strand, within MPMX20_04316 at 4510.988 kb on + strand, within MPMX20_04316 at 4511.055 kb on - strand, within MPMX20_04316 at 4511.062 kb on + strand, within MPMX20_04316 at 4511.086 kb on + strand, within MPMX20_04316 at 4511.232 kb on - strand, within MPMX20_04316 at 4511.323 kb on - strand, within MPMX20_04316 at 4511.329 kb on - strand, within MPMX20_04316 at 4511.406 kb on + strand at 4511.421 kb on + strand at 4511.438 kb on + strand at 4511.438 kb on + strand at 4511.504 kb on + strand at 4511.525 kb on + strand at 4511.623 kb on + strand at 4511.656 kb on + strand, within MPMX20_04317 at 4511.664 kb on - strand, within MPMX20_04317 at 4511.686 kb on - strand, within MPMX20_04317 at 4511.701 kb on - strand, within MPMX20_04317 at 4511.743 kb on - strand, within MPMX20_04317 at 4511.743 kb on - strand, within MPMX20_04317 at 4511.743 kb on - strand, within MPMX20_04317 at 4511.774 kb on + strand, within MPMX20_04317 at 4511.774 kb on + strand, within MPMX20_04317 at 4511.782 kb on - strand, within MPMX20_04317 at 4511.782 kb on - strand, within MPMX20_04317 at 4511.782 kb on - strand, within MPMX20_04317 at 4511.782 kb on - strand, within MPMX20_04317 at 4511.801 kb on - strand, within MPMX20_04317 at 4511.825 kb on + strand, within MPMX20_04317 at 4511.825 kb on + strand, within MPMX20_04317 at 4511.830 kb on + strand, within MPMX20_04317 at 4511.830 kb on + strand, within MPMX20_04317 at 4511.838 kb on - strand, within MPMX20_04317 at 4511.838 kb on - strand, within MPMX20_04317 at 4511.838 kb on - strand, within MPMX20_04317 at 4511.838 kb on - strand, within MPMX20_04317 at 4511.840 kb on + strand, within MPMX20_04317 at 4511.847 kb on + strand, within MPMX20_04317 at 4511.848 kb on - strand, within MPMX20_04317 at 4511.858 kb on + strand, within MPMX20_04317 at 4511.944 kb on + strand, within MPMX20_04317 at 4512.013 kb on + strand, within MPMX20_04317 at 4512.076 kb on + strand, within MPMX20_04317 at 4512.084 kb on - strand, within MPMX20_04317 at 4512.084 kb on - strand, within MPMX20_04317 at 4512.156 kb on - strand, within MPMX20_04317 at 4512.256 kb on - strand, within MPMX20_04317 at 4512.282 kb on - strand, within MPMX20_04317 at 4512.293 kb on - strand, within MPMX20_04317 at 4512.352 kb on + strand, within MPMX20_04317 at 4512.357 kb on + strand, within MPMX20_04317 at 4512.467 kb on - strand, within MPMX20_04317 at 4512.517 kb on - strand, within MPMX20_04317 at 4512.545 kb on + strand, within MPMX20_04317 at 4512.724 kb on - strand at 4512.750 kb on - strand at 4512.791 kb on - strand at 4512.807 kb on - strand at 4512.883 kb on - strand at 4512.947 kb on + strand, within MPMX20_04318 at 4512.954 kb on + strand, within MPMX20_04318 at 4512.974 kb on + strand, within MPMX20_04318 at 4513.014 kb on - strand, within MPMX20_04318 at 4513.016 kb on + strand, within MPMX20_04318 at 4513.024 kb on - strand, within MPMX20_04318 at 4513.024 kb on - strand, within MPMX20_04318 at 4513.082 kb on - strand, within MPMX20_04318 at 4513.158 kb on + strand, within MPMX20_04318 at 4513.296 kb on - strand, within MPMX20_04318 at 4513.306 kb on - strand, within MPMX20_04318 at 4513.316 kb on - strand, within MPMX20_04318 at 4513.316 kb on - strand, within MPMX20_04318 at 4513.375 kb on - strand at 4513.448 kb on + strand at 4513.448 kb on + strand at 4513.456 kb on - strand at 4513.475 kb on - strand at 4513.626 kb on - strand, within MPMX20_04319 at 4513.662 kb on - strand, within MPMX20_04319 at 4513.724 kb on + strand, within MPMX20_04319 at 4513.756 kb on - strand, within MPMX20_04319 at 4513.775 kb on - strand, within MPMX20_04319 at 4513.830 kb on + strand, within MPMX20_04319 at 4513.830 kb on + strand, within MPMX20_04319 at 4513.838 kb on - strand, within MPMX20_04319 at 4513.838 kb on - strand, within MPMX20_04319 at 4513.838 kb on - strand, within MPMX20_04319
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (N) remove 4,510,705 + -0.2 4,510,747 - -1.4 4,510,838 - +0.0 4,510,838 - -0.6 4,510,873 - -1.5 4,510,913 - -3.7 4,510,940 + MPMX20_04316 0.14 -1.4 4,510,953 + MPMX20_04316 0.16 -2.2 4,510,961 - MPMX20_04316 0.18 -0.4 4,510,988 + MPMX20_04316 0.22 -0.8 4,511,055 - MPMX20_04316 0.33 +0.2 4,511,062 + MPMX20_04316 0.35 -0.8 4,511,086 + MPMX20_04316 0.39 -0.1 4,511,232 - MPMX20_04316 0.63 +0.8 4,511,323 - MPMX20_04316 0.78 -1.5 4,511,329 - MPMX20_04316 0.79 -0.2 4,511,406 + -1.4 4,511,421 + -1.1 4,511,438 + +0.9 4,511,438 + +0.0 4,511,504 + +0.2 4,511,525 + +1.9 4,511,623 + +2.9 4,511,656 + MPMX20_04317 0.12 -2.2 4,511,664 - MPMX20_04317 0.12 -1.0 4,511,686 - MPMX20_04317 0.14 -1.4 4,511,701 - MPMX20_04317 0.15 -1.2 4,511,743 - MPMX20_04317 0.18 -1.2 4,511,743 - MPMX20_04317 0.18 +0.1 4,511,743 - MPMX20_04317 0.18 +2.4 4,511,774 + MPMX20_04317 0.20 -0.0 4,511,774 + MPMX20_04317 0.20 +0.4 4,511,782 - MPMX20_04317 0.21 -0.8 4,511,782 - MPMX20_04317 0.21 -0.9 4,511,782 - MPMX20_04317 0.21 +1.1 4,511,782 - MPMX20_04317 0.21 +0.0 4,511,801 - MPMX20_04317 0.22 -0.0 4,511,825 + MPMX20_04317 0.24 -0.2 4,511,825 + MPMX20_04317 0.24 +1.8 4,511,830 + MPMX20_04317 0.25 -2.1 4,511,830 + MPMX20_04317 0.25 -0.9 4,511,838 - MPMX20_04317 0.25 -0.0 4,511,838 - MPMX20_04317 0.25 +0.6 4,511,838 - MPMX20_04317 0.25 -0.4 4,511,838 - MPMX20_04317 0.25 -2.4 4,511,840 + MPMX20_04317 0.25 +0.6 4,511,847 + MPMX20_04317 0.26 -0.4 4,511,848 - MPMX20_04317 0.26 -0.9 4,511,858 + MPMX20_04317 0.27 +0.4 4,511,944 + MPMX20_04317 0.33 -0.7 4,512,013 + MPMX20_04317 0.38 -1.4 4,512,076 + MPMX20_04317 0.43 -0.2 4,512,084 - MPMX20_04317 0.43 -1.0 4,512,084 - MPMX20_04317 0.43 -0.4 4,512,156 - MPMX20_04317 0.49 -0.6 4,512,256 - MPMX20_04317 0.56 -0.6 4,512,282 - MPMX20_04317 0.58 -0.7 4,512,293 - MPMX20_04317 0.59 -1.5 4,512,352 + MPMX20_04317 0.63 +0.3 4,512,357 + MPMX20_04317 0.64 +0.6 4,512,467 - MPMX20_04317 0.72 -0.5 4,512,517 - MPMX20_04317 0.76 +1.0 4,512,545 + MPMX20_04317 0.78 -1.6 4,512,724 - -0.4 4,512,750 - -0.8 4,512,791 - -0.8 4,512,807 - +2.1 4,512,883 - +0.8 4,512,947 + MPMX20_04318 0.19 +0.3 4,512,954 + MPMX20_04318 0.21 -0.2 4,512,974 + MPMX20_04318 0.24 +1.1 4,513,014 - MPMX20_04318 0.32 -0.6 4,513,016 + MPMX20_04318 0.32 +1.0 4,513,024 - MPMX20_04318 0.34 -1.7 4,513,024 - MPMX20_04318 0.34 +0.0 4,513,082 - MPMX20_04318 0.45 -1.6 4,513,158 + MPMX20_04318 0.59 +1.0 4,513,296 - MPMX20_04318 0.85 -2.3 4,513,306 - MPMX20_04318 0.87 +0.5 4,513,316 - MPMX20_04318 0.89 +0.7 4,513,316 - MPMX20_04318 0.89 +0.0 4,513,375 - +0.3 4,513,448 + +1.4 4,513,448 + +0.7 4,513,456 - -0.9 4,513,475 - +0.9 4,513,626 - MPMX20_04319 0.13 -3.3 4,513,662 - MPMX20_04319 0.16 -2.5 4,513,724 + MPMX20_04319 0.23 -3.2 4,513,756 - MPMX20_04319 0.26 -0.2 4,513,775 - MPMX20_04319 0.28 -0.4 4,513,830 + MPMX20_04319 0.33 -3.2 4,513,830 + MPMX20_04319 0.33 -2.4 4,513,838 - MPMX20_04319 0.34 -2.6 4,513,838 - MPMX20_04319 0.34 -3.2 4,513,838 - MPMX20_04319 0.34 -2.9
Or see this region's nucleotide sequence