Experiment: Gelatin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04275 and MPMX20_04276 are separated by 41 nucleotides MPMX20_04276 and MPMX20_04277 are separated by 67 nucleotides MPMX20_04277 and MPMX20_04278 are separated by 92 nucleotides
MPMX20_04275: MPMX20_04275 - Ribulose-phosphate 3-epimerase, at 4,457,686 to 4,458,363
_04275
MPMX20_04276: MPMX20_04276 - DNA adenine methylase, at 4,458,405 to 4,459,217
_04276
MPMX20_04277: MPMX20_04277 - Cell division protein DamX, at 4,459,285 to 4,460,595
_04277
MPMX20_04278: MPMX20_04278 - 3-dehydroquinate synthase, at 4,460,688 to 4,461,776
_04278
Position (kb)
4459
4460
4461 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4458.301 kb on + strand at 4458.309 kb on - strand at 4458.411 kb on - strand at 4458.411 kb on - strand at 4458.411 kb on - strand at 4458.502 kb on + strand, within MPMX20_04276 at 4458.521 kb on + strand, within MPMX20_04276 at 4458.529 kb on - strand, within MPMX20_04276 at 4458.600 kb on - strand, within MPMX20_04276 at 4458.619 kb on - strand, within MPMX20_04276 at 4458.627 kb on + strand, within MPMX20_04276 at 4458.654 kb on + strand, within MPMX20_04276 at 4458.682 kb on - strand, within MPMX20_04276 at 4458.719 kb on + strand, within MPMX20_04276 at 4458.775 kb on + strand, within MPMX20_04276 at 4458.820 kb on + strand, within MPMX20_04276 at 4458.839 kb on + strand, within MPMX20_04276 at 4458.849 kb on + strand, within MPMX20_04276 at 4458.872 kb on + strand, within MPMX20_04276 at 4458.883 kb on + strand, within MPMX20_04276 at 4458.891 kb on - strand, within MPMX20_04276 at 4458.970 kb on + strand, within MPMX20_04276 at 4458.970 kb on + strand, within MPMX20_04276 at 4458.970 kb on + strand, within MPMX20_04276 at 4458.970 kb on + strand, within MPMX20_04276 at 4458.978 kb on - strand, within MPMX20_04276 at 4458.978 kb on - strand, within MPMX20_04276 at 4458.988 kb on - strand, within MPMX20_04276 at 4458.999 kb on - strand, within MPMX20_04276 at 4459.026 kb on + strand, within MPMX20_04276 at 4459.028 kb on + strand, within MPMX20_04276 at 4459.033 kb on + strand, within MPMX20_04276 at 4459.036 kb on - strand, within MPMX20_04276 at 4459.036 kb on - strand, within MPMX20_04276 at 4459.058 kb on - strand, within MPMX20_04276 at 4459.221 kb on + strand at 4459.237 kb on - strand at 4459.237 kb on - strand at 4459.298 kb on + strand at 4459.306 kb on - strand at 4459.365 kb on - strand at 4459.408 kb on - strand at 4459.415 kb on + strand at 4459.415 kb on + strand at 4459.423 kb on - strand, within MPMX20_04277 at 4459.484 kb on + strand, within MPMX20_04277 at 4459.511 kb on + strand, within MPMX20_04277 at 4459.521 kb on - strand, within MPMX20_04277 at 4459.932 kb on + strand, within MPMX20_04277 at 4459.940 kb on - strand, within MPMX20_04277 at 4459.962 kb on - strand, within MPMX20_04277 at 4460.020 kb on + strand, within MPMX20_04277 at 4460.020 kb on + strand, within MPMX20_04277 at 4460.045 kb on + strand, within MPMX20_04277 at 4460.051 kb on - strand, within MPMX20_04277 at 4460.053 kb on - strand, within MPMX20_04277 at 4460.115 kb on - strand, within MPMX20_04277 at 4460.121 kb on + strand, within MPMX20_04277 at 4460.132 kb on + strand, within MPMX20_04277 at 4460.159 kb on - strand, within MPMX20_04277 at 4460.164 kb on - strand, within MPMX20_04277 at 4460.171 kb on + strand, within MPMX20_04277 at 4460.365 kb on + strand, within MPMX20_04277 at 4460.379 kb on - strand, within MPMX20_04277 at 4460.453 kb on + strand, within MPMX20_04277 at 4460.483 kb on - strand at 4460.628 kb on - strand at 4460.667 kb on - strand at 4460.677 kb on - strand at 4460.693 kb on + strand at 4460.881 kb on + strand, within MPMX20_04278 at 4460.889 kb on - strand, within MPMX20_04278 at 4460.889 kb on - strand, within MPMX20_04278 at 4460.889 kb on - strand, within MPMX20_04278 at 4460.899 kb on - strand, within MPMX20_04278 at 4460.944 kb on - strand, within MPMX20_04278 at 4461.038 kb on + strand, within MPMX20_04278 at 4461.153 kb on + strand, within MPMX20_04278 at 4461.171 kb on - strand, within MPMX20_04278 at 4461.281 kb on - strand, within MPMX20_04278 at 4461.281 kb on - strand, within MPMX20_04278 at 4461.482 kb on + strand, within MPMX20_04278 at 4461.482 kb on + strand, within MPMX20_04278 at 4461.490 kb on - strand, within MPMX20_04278 at 4461.529 kb on + strand, within MPMX20_04278 at 4461.546 kb on + strand, within MPMX20_04278 at 4461.547 kb on + strand, within MPMX20_04278 at 4461.547 kb on + strand, within MPMX20_04278 at 4461.582 kb on + strand, within MPMX20_04278
Per-strain Table
Position Strand Gene LocusTag Fraction Gelatin (N) remove 4,458,301 + -1.3 4,458,309 - +0.7 4,458,411 - -1.3 4,458,411 - -3.0 4,458,411 - +0.3 4,458,502 + MPMX20_04276 0.12 -1.2 4,458,521 + MPMX20_04276 0.14 +1.7 4,458,529 - MPMX20_04276 0.15 +1.1 4,458,600 - MPMX20_04276 0.24 -0.6 4,458,619 - MPMX20_04276 0.26 -2.7 4,458,627 + MPMX20_04276 0.27 +1.1 4,458,654 + MPMX20_04276 0.31 -1.7 4,458,682 - MPMX20_04276 0.34 -0.9 4,458,719 + MPMX20_04276 0.39 +1.3 4,458,775 + MPMX20_04276 0.46 +0.7 4,458,820 + MPMX20_04276 0.51 -0.9 4,458,839 + MPMX20_04276 0.53 -1.1 4,458,849 + MPMX20_04276 0.55 -1.2 4,458,872 + MPMX20_04276 0.57 -0.9 4,458,883 + MPMX20_04276 0.59 -0.1 4,458,891 - MPMX20_04276 0.60 -0.6 4,458,970 + MPMX20_04276 0.69 +0.5 4,458,970 + MPMX20_04276 0.69 +0.1 4,458,970 + MPMX20_04276 0.69 -1.3 4,458,970 + MPMX20_04276 0.69 +2.4 4,458,978 - MPMX20_04276 0.70 -3.0 4,458,978 - MPMX20_04276 0.70 -1.5 4,458,988 - MPMX20_04276 0.72 +1.6 4,458,999 - MPMX20_04276 0.73 -1.1 4,459,026 + MPMX20_04276 0.76 -1.9 4,459,028 + MPMX20_04276 0.77 -2.2 4,459,033 + MPMX20_04276 0.77 -1.6 4,459,036 - MPMX20_04276 0.78 -2.6 4,459,036 - MPMX20_04276 0.78 -1.6 4,459,058 - MPMX20_04276 0.80 -0.1 4,459,221 + +0.4 4,459,237 - -2.7 4,459,237 - -0.4 4,459,298 + -1.1 4,459,306 - -0.9 4,459,365 - +2.2 4,459,408 - -2.3 4,459,415 + +3.7 4,459,415 + +0.1 4,459,423 - MPMX20_04277 0.11 -1.8 4,459,484 + MPMX20_04277 0.15 +0.7 4,459,511 + MPMX20_04277 0.17 -0.9 4,459,521 - MPMX20_04277 0.18 -3.2 4,459,932 + MPMX20_04277 0.49 +0.4 4,459,940 - MPMX20_04277 0.50 -1.5 4,459,962 - MPMX20_04277 0.52 -3.0 4,460,020 + MPMX20_04277 0.56 +1.3 4,460,020 + MPMX20_04277 0.56 +0.8 4,460,045 + MPMX20_04277 0.58 -0.3 4,460,051 - MPMX20_04277 0.58 +0.5 4,460,053 - MPMX20_04277 0.59 -0.2 4,460,115 - MPMX20_04277 0.63 -0.1 4,460,121 + MPMX20_04277 0.64 -1.4 4,460,132 + MPMX20_04277 0.65 +0.1 4,460,159 - MPMX20_04277 0.67 -0.5 4,460,164 - MPMX20_04277 0.67 -0.3 4,460,171 + MPMX20_04277 0.68 -2.2 4,460,365 + MPMX20_04277 0.82 -1.5 4,460,379 - MPMX20_04277 0.83 -1.0 4,460,453 + MPMX20_04277 0.89 -0.7 4,460,483 - -0.5 4,460,628 - +2.1 4,460,667 - +0.0 4,460,677 - -1.4 4,460,693 + -0.3 4,460,881 + MPMX20_04278 0.18 -0.5 4,460,889 - MPMX20_04278 0.18 -1.5 4,460,889 - MPMX20_04278 0.18 +0.1 4,460,889 - MPMX20_04278 0.18 +0.1 4,460,899 - MPMX20_04278 0.19 -2.0 4,460,944 - MPMX20_04278 0.24 -1.4 4,461,038 + MPMX20_04278 0.32 +1.3 4,461,153 + MPMX20_04278 0.43 -2.3 4,461,171 - MPMX20_04278 0.44 -0.9 4,461,281 - MPMX20_04278 0.54 -3.7 4,461,281 - MPMX20_04278 0.54 +0.2 4,461,482 + MPMX20_04278 0.73 +0.4 4,461,482 + MPMX20_04278 0.73 -1.5 4,461,490 - MPMX20_04278 0.74 -0.5 4,461,529 + MPMX20_04278 0.77 +0.1 4,461,546 + MPMX20_04278 0.79 -0.3 4,461,547 + MPMX20_04278 0.79 -1.5 4,461,547 + MPMX20_04278 0.79 +1.5 4,461,582 + MPMX20_04278 0.82 -1.2
Or see this region's nucleotide sequence