Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01603

Experiment: Gelatin (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01602 and MPMX20_01603 overlap by 4 nucleotidesMPMX20_01603 and MPMX20_01604 are separated by 497 nucleotides MPMX20_01602: MPMX20_01602 - Intermembrane transport protein PqiB, at 1,693,569 to 1,695,209 _01602 MPMX20_01603: MPMX20_01603 - Intermembrane transport lipoprotein PqiC, at 1,695,206 to 1,695,772 _01603 MPMX20_01604: MPMX20_01604 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 1,696,270 to 1,696,788 _01604 Position (kb) 1695 1696Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1694.270 kb on + strand, within MPMX20_01602at 1694.322 kb on - strand, within MPMX20_01602at 1694.322 kb on - strand, within MPMX20_01602at 1694.416 kb on - strand, within MPMX20_01602at 1694.416 kb on - strand, within MPMX20_01602at 1694.461 kb on + strand, within MPMX20_01602at 1694.461 kb on + strand, within MPMX20_01602at 1694.469 kb on - strand, within MPMX20_01602at 1694.469 kb on - strand, within MPMX20_01602at 1694.489 kb on - strand, within MPMX20_01602at 1694.494 kb on + strand, within MPMX20_01602at 1694.504 kb on + strand, within MPMX20_01602at 1694.507 kb on - strand, within MPMX20_01602at 1694.541 kb on + strand, within MPMX20_01602at 1694.600 kb on - strand, within MPMX20_01602at 1694.625 kb on + strand, within MPMX20_01602at 1694.668 kb on - strand, within MPMX20_01602at 1694.707 kb on - strand, within MPMX20_01602at 1695.019 kb on - strand, within MPMX20_01602at 1695.030 kb on + strand, within MPMX20_01602at 1695.096 kb on - strandat 1695.196 kb on - strandat 1695.255 kb on + strandat 1695.263 kb on - strand, within MPMX20_01603at 1695.263 kb on - strand, within MPMX20_01603at 1695.263 kb on - strand, within MPMX20_01603at 1695.297 kb on - strand, within MPMX20_01603at 1695.343 kb on + strand, within MPMX20_01603at 1695.348 kb on + strand, within MPMX20_01603at 1695.351 kb on - strand, within MPMX20_01603at 1695.351 kb on - strand, within MPMX20_01603at 1695.356 kb on - strand, within MPMX20_01603at 1695.508 kb on + strand, within MPMX20_01603at 1695.622 kb on - strand, within MPMX20_01603at 1695.629 kb on + strand, within MPMX20_01603at 1695.707 kb on - strand, within MPMX20_01603at 1695.713 kb on + strand, within MPMX20_01603at 1695.713 kb on + strand, within MPMX20_01603at 1695.883 kb on + strandat 1695.891 kb on - strandat 1695.950 kb on - strandat 1695.977 kb on - strandat 1695.982 kb on - strandat 1696.185 kb on + strandat 1696.186 kb on + strandat 1696.186 kb on + strandat 1696.194 kb on - strandat 1696.230 kb on - strandat 1696.294 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Gelatin (N)
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1,694,270 + MPMX20_01602 0.43 +0.0
1,694,322 - MPMX20_01602 0.46 -0.6
1,694,322 - MPMX20_01602 0.46 -0.6
1,694,416 - MPMX20_01602 0.52 -0.3
1,694,416 - MPMX20_01602 0.52 +2.2
1,694,461 + MPMX20_01602 0.54 -2.8
1,694,461 + MPMX20_01602 0.54 -2.7
1,694,469 - MPMX20_01602 0.55 -3.8
1,694,469 - MPMX20_01602 0.55 -2.4
1,694,489 - MPMX20_01602 0.56 -1.8
1,694,494 + MPMX20_01602 0.56 -1.3
1,694,504 + MPMX20_01602 0.57 +0.4
1,694,507 - MPMX20_01602 0.57 +1.2
1,694,541 + MPMX20_01602 0.59 -1.0
1,694,600 - MPMX20_01602 0.63 +0.3
1,694,625 + MPMX20_01602 0.64 +0.0
1,694,668 - MPMX20_01602 0.67 -0.6
1,694,707 - MPMX20_01602 0.69 +1.0
1,695,019 - MPMX20_01602 0.88 +0.7
1,695,030 + MPMX20_01602 0.89 +2.0
1,695,096 - +0.3
1,695,196 - -1.8
1,695,255 + +0.9
1,695,263 - MPMX20_01603 0.10 +0.4
1,695,263 - MPMX20_01603 0.10 +2.4
1,695,263 - MPMX20_01603 0.10 +2.1
1,695,297 - MPMX20_01603 0.16 +0.4
1,695,343 + MPMX20_01603 0.24 +0.5
1,695,348 + MPMX20_01603 0.25 +1.2
1,695,351 - MPMX20_01603 0.26 +0.1
1,695,351 - MPMX20_01603 0.26 -1.1
1,695,356 - MPMX20_01603 0.26 +1.0
1,695,508 + MPMX20_01603 0.53 -0.9
1,695,622 - MPMX20_01603 0.73 -0.5
1,695,629 + MPMX20_01603 0.75 -1.4
1,695,707 - MPMX20_01603 0.88 -1.1
1,695,713 + MPMX20_01603 0.89 -1.1
1,695,713 + MPMX20_01603 0.89 -2.1
1,695,883 + -0.4
1,695,891 - +0.4
1,695,950 - +0.3
1,695,977 - +0.1
1,695,982 - +0.8
1,696,185 + -0.2
1,696,186 + -0.3
1,696,186 + +0.9
1,696,194 - +1.0
1,696,230 - -1.7
1,696,294 - +0.0

Or see this region's nucleotide sequence