Experiment: Gelatin (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01602 and MPMX20_01603 overlap by 4 nucleotides MPMX20_01603 and MPMX20_01604 are separated by 497 nucleotides
MPMX20_01602: MPMX20_01602 - Intermembrane transport protein PqiB, at 1,693,569 to 1,695,209
_01602
MPMX20_01603: MPMX20_01603 - Intermembrane transport lipoprotein PqiC, at 1,695,206 to 1,695,772
_01603
MPMX20_01604: MPMX20_01604 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 1,696,270 to 1,696,788
_01604
Position (kb)
1695
1696 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1694.270 kb on + strand, within MPMX20_01602 at 1694.322 kb on - strand, within MPMX20_01602 at 1694.322 kb on - strand, within MPMX20_01602 at 1694.416 kb on - strand, within MPMX20_01602 at 1694.416 kb on - strand, within MPMX20_01602 at 1694.461 kb on + strand, within MPMX20_01602 at 1694.461 kb on + strand, within MPMX20_01602 at 1694.469 kb on - strand, within MPMX20_01602 at 1694.469 kb on - strand, within MPMX20_01602 at 1694.489 kb on - strand, within MPMX20_01602 at 1694.494 kb on + strand, within MPMX20_01602 at 1694.504 kb on + strand, within MPMX20_01602 at 1694.507 kb on - strand, within MPMX20_01602 at 1694.541 kb on + strand, within MPMX20_01602 at 1694.600 kb on - strand, within MPMX20_01602 at 1694.625 kb on + strand, within MPMX20_01602 at 1694.668 kb on - strand, within MPMX20_01602 at 1694.707 kb on - strand, within MPMX20_01602 at 1695.019 kb on - strand, within MPMX20_01602 at 1695.030 kb on + strand, within MPMX20_01602 at 1695.096 kb on - strand at 1695.196 kb on - strand at 1695.255 kb on + strand at 1695.263 kb on - strand, within MPMX20_01603 at 1695.263 kb on - strand, within MPMX20_01603 at 1695.263 kb on - strand, within MPMX20_01603 at 1695.297 kb on - strand, within MPMX20_01603 at 1695.343 kb on + strand, within MPMX20_01603 at 1695.348 kb on + strand, within MPMX20_01603 at 1695.351 kb on - strand, within MPMX20_01603 at 1695.351 kb on - strand, within MPMX20_01603 at 1695.356 kb on - strand, within MPMX20_01603 at 1695.508 kb on + strand, within MPMX20_01603 at 1695.622 kb on - strand, within MPMX20_01603 at 1695.629 kb on + strand, within MPMX20_01603 at 1695.707 kb on - strand, within MPMX20_01603 at 1695.713 kb on + strand, within MPMX20_01603 at 1695.713 kb on + strand, within MPMX20_01603 at 1695.883 kb on + strand at 1695.891 kb on - strand at 1695.950 kb on - strand at 1695.977 kb on - strand at 1695.982 kb on - strand at 1696.185 kb on + strand at 1696.186 kb on + strand at 1696.186 kb on + strand at 1696.194 kb on - strand at 1696.230 kb on - strand at 1696.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gelatin (N) remove 1,694,270 + MPMX20_01602 0.43 +0.0 1,694,322 - MPMX20_01602 0.46 -0.6 1,694,322 - MPMX20_01602 0.46 -0.6 1,694,416 - MPMX20_01602 0.52 -0.3 1,694,416 - MPMX20_01602 0.52 +2.2 1,694,461 + MPMX20_01602 0.54 -2.8 1,694,461 + MPMX20_01602 0.54 -2.7 1,694,469 - MPMX20_01602 0.55 -3.8 1,694,469 - MPMX20_01602 0.55 -2.4 1,694,489 - MPMX20_01602 0.56 -1.8 1,694,494 + MPMX20_01602 0.56 -1.3 1,694,504 + MPMX20_01602 0.57 +0.4 1,694,507 - MPMX20_01602 0.57 +1.2 1,694,541 + MPMX20_01602 0.59 -1.0 1,694,600 - MPMX20_01602 0.63 +0.3 1,694,625 + MPMX20_01602 0.64 +0.0 1,694,668 - MPMX20_01602 0.67 -0.6 1,694,707 - MPMX20_01602 0.69 +1.0 1,695,019 - MPMX20_01602 0.88 +0.7 1,695,030 + MPMX20_01602 0.89 +2.0 1,695,096 - +0.3 1,695,196 - -1.8 1,695,255 + +0.9 1,695,263 - MPMX20_01603 0.10 +0.4 1,695,263 - MPMX20_01603 0.10 +2.4 1,695,263 - MPMX20_01603 0.10 +2.1 1,695,297 - MPMX20_01603 0.16 +0.4 1,695,343 + MPMX20_01603 0.24 +0.5 1,695,348 + MPMX20_01603 0.25 +1.2 1,695,351 - MPMX20_01603 0.26 +0.1 1,695,351 - MPMX20_01603 0.26 -1.1 1,695,356 - MPMX20_01603 0.26 +1.0 1,695,508 + MPMX20_01603 0.53 -0.9 1,695,622 - MPMX20_01603 0.73 -0.5 1,695,629 + MPMX20_01603 0.75 -1.4 1,695,707 - MPMX20_01603 0.88 -1.1 1,695,713 + MPMX20_01603 0.89 -1.1 1,695,713 + MPMX20_01603 0.89 -2.1 1,695,883 + -0.4 1,695,891 - +0.4 1,695,950 - +0.3 1,695,977 - +0.1 1,695,982 - +0.8 1,696,185 + -0.2 1,696,186 + -0.3 1,696,186 + +0.9 1,696,194 - +1.0 1,696,230 - -1.7 1,696,294 - +0.0
Or see this region's nucleotide sequence