Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00630

Experiment: Carnitine Hydrochloride (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00629 and MPMX20_00630 are separated by 10 nucleotidesMPMX20_00630 and MPMX20_00631 are separated by 39 nucleotides MPMX20_00629: MPMX20_00629 - P-loop guanosine triphosphatase YjiA, at 653,747 to 654,700 _00629 MPMX20_00630: MPMX20_00630 - hypothetical protein, at 654,711 to 654,971 _00630 MPMX20_00631: MPMX20_00631 - Pyruvate/proton symporter BtsT, at 655,011 to 657,164 _00631 Position (kb) 654 655Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 653.713 kb on + strandat 653.713 kb on + strandat 653.713 kb on + strandat 653.713 kb on + strandat 653.713 kb on + strandat 653.715 kb on + strandat 653.721 kb on - strandat 653.721 kb on - strandat 653.721 kb on - strandat 653.721 kb on - strandat 653.721 kb on - strandat 653.721 kb on - strandat 653.731 kb on - strandat 653.735 kb on + strandat 653.738 kb on - strandat 653.766 kb on - strandat 653.794 kb on + strandat 653.845 kb on + strand, within MPMX20_00629at 653.849 kb on + strand, within MPMX20_00629at 653.849 kb on + strand, within MPMX20_00629at 653.857 kb on - strand, within MPMX20_00629at 653.862 kb on + strand, within MPMX20_00629at 653.864 kb on + strand, within MPMX20_00629at 653.870 kb on - strand, within MPMX20_00629at 653.888 kb on - strand, within MPMX20_00629at 654.003 kb on + strand, within MPMX20_00629at 654.003 kb on + strand, within MPMX20_00629at 654.059 kb on - strand, within MPMX20_00629at 654.070 kb on + strand, within MPMX20_00629at 654.078 kb on - strand, within MPMX20_00629at 654.080 kb on + strand, within MPMX20_00629at 654.094 kb on + strand, within MPMX20_00629at 654.094 kb on + strand, within MPMX20_00629at 654.102 kb on - strand, within MPMX20_00629at 654.102 kb on - strand, within MPMX20_00629at 654.108 kb on + strand, within MPMX20_00629at 654.132 kb on + strand, within MPMX20_00629at 654.265 kb on + strand, within MPMX20_00629at 654.305 kb on - strand, within MPMX20_00629at 654.314 kb on - strand, within MPMX20_00629at 654.314 kb on - strand, within MPMX20_00629at 654.314 kb on - strand, within MPMX20_00629at 654.509 kb on - strand, within MPMX20_00629at 654.525 kb on + strand, within MPMX20_00629at 654.533 kb on - strand, within MPMX20_00629at 654.669 kb on + strandat 654.679 kb on + strandat 654.687 kb on - strandat 654.715 kb on - strandat 654.822 kb on - strand, within MPMX20_00630at 654.832 kb on - strand, within MPMX20_00630at 654.837 kb on + strand, within MPMX20_00630at 654.912 kb on + strand, within MPMX20_00630at 654.912 kb on + strand, within MPMX20_00630at 654.971 kb on + strandat 654.971 kb on + strandat 654.971 kb on + strandat 654.971 kb on + strandat 654.971 kb on + strandat 654.971 kb on + strandat 654.971 kb on + strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.979 kb on - strandat 654.983 kb on + strandat 654.991 kb on - strandat 654.991 kb on - strandat 655.034 kb on - strandat 655.105 kb on - strandat 655.124 kb on + strandat 655.134 kb on + strandat 655.158 kb on + strandat 655.195 kb on - strandat 655.212 kb on + strandat 655.219 kb on + strandat 655.222 kb on - strandat 655.227 kb on - strand, within MPMX20_00631at 655.229 kb on - strand, within MPMX20_00631at 655.234 kb on - strand, within MPMX20_00631at 655.262 kb on + strand, within MPMX20_00631at 655.270 kb on - strand, within MPMX20_00631at 655.270 kb on - strand, within MPMX20_00631at 655.270 kb on - strand, within MPMX20_00631at 655.308 kb on - strand, within MPMX20_00631at 655.310 kb on + strand, within MPMX20_00631at 655.333 kb on + strand, within MPMX20_00631at 655.352 kb on + strand, within MPMX20_00631at 655.360 kb on - strand, within MPMX20_00631at 655.360 kb on - strand, within MPMX20_00631at 655.366 kb on - strand, within MPMX20_00631at 655.393 kb on + strand, within MPMX20_00631at 655.411 kb on - strand, within MPMX20_00631at 655.411 kb on - strand, within MPMX20_00631at 655.502 kb on + strand, within MPMX20_00631at 655.502 kb on - strand, within MPMX20_00631at 655.504 kb on + strand, within MPMX20_00631at 655.524 kb on + strand, within MPMX20_00631at 655.537 kb on - strand, within MPMX20_00631at 655.597 kb on + strand, within MPMX20_00631at 655.628 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.782 kb on + strand, within MPMX20_00631at 655.787 kb on + strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.790 kb on - strand, within MPMX20_00631at 655.824 kb on - strand, within MPMX20_00631at 655.842 kb on - strand, within MPMX20_00631at 655.849 kb on + strand, within MPMX20_00631at 655.850 kb on + strand, within MPMX20_00631at 655.855 kb on + strand, within MPMX20_00631at 655.888 kb on + strand, within MPMX20_00631at 655.913 kb on - strand, within MPMX20_00631at 655.920 kb on + strand, within MPMX20_00631at 655.956 kb on + strand, within MPMX20_00631at 655.959 kb on - strand, within MPMX20_00631at 655.959 kb on - strand, within MPMX20_00631at 655.964 kb on - strand, within MPMX20_00631

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Per-strain Table

Position Strand Gene LocusTag Fraction Carnitine Hydrochloride (N)
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653,713 + -1.0
653,713 + -1.0
653,713 + +1.1
653,713 + +0.4
653,713 + +0.2
653,715 + -2.8
653,721 - +1.8
653,721 - -1.1
653,721 - +1.5
653,721 - -3.3
653,721 - -3.6
653,721 - -1.4
653,731 - +0.7
653,735 + +0.5
653,738 - -1.4
653,766 - -0.5
653,794 + -1.0
653,845 + MPMX20_00629 0.10 -3.0
653,849 + MPMX20_00629 0.11 +0.1
653,849 + MPMX20_00629 0.11 -0.3
653,857 - MPMX20_00629 0.12 -1.0
653,862 + MPMX20_00629 0.12 +0.1
653,864 + MPMX20_00629 0.12 +0.4
653,870 - MPMX20_00629 0.13 -1.1
653,888 - MPMX20_00629 0.15 +0.4
654,003 + MPMX20_00629 0.27 +0.8
654,003 + MPMX20_00629 0.27 -2.6
654,059 - MPMX20_00629 0.33 +1.0
654,070 + MPMX20_00629 0.34 -0.1
654,078 - MPMX20_00629 0.35 -0.7
654,080 + MPMX20_00629 0.35 -0.9
654,094 + MPMX20_00629 0.36 -0.3
654,094 + MPMX20_00629 0.36 +0.1
654,102 - MPMX20_00629 0.37 +0.2
654,102 - MPMX20_00629 0.37 -0.5
654,108 + MPMX20_00629 0.38 -1.5
654,132 + MPMX20_00629 0.40 +1.8
654,265 + MPMX20_00629 0.54 -3.5
654,305 - MPMX20_00629 0.58 +1.7
654,314 - MPMX20_00629 0.59 +0.7
654,314 - MPMX20_00629 0.59 -1.8
654,314 - MPMX20_00629 0.59 -0.6
654,509 - MPMX20_00629 0.80 +0.1
654,525 + MPMX20_00629 0.82 -2.0
654,533 - MPMX20_00629 0.82 -0.1
654,669 + -0.4
654,679 + +0.3
654,687 - -2.7
654,715 - +0.8
654,822 - MPMX20_00630 0.43 -2.0
654,832 - MPMX20_00630 0.46 -0.7
654,837 + MPMX20_00630 0.48 -0.7
654,912 + MPMX20_00630 0.77 -2.5
654,912 + MPMX20_00630 0.77 -0.7
654,971 + -0.0
654,971 + -2.9
654,971 + +0.2
654,971 + +0.6
654,971 + -0.9
654,971 + -3.6
654,971 + -0.9
654,979 - +0.5
654,979 - +0.0
654,979 - -1.0
654,979 - +0.4
654,979 - -2.4
654,979 - -2.1
654,979 - +0.3
654,979 - -0.3
654,979 - -0.3
654,979 - +0.2
654,979 - -2.3
654,979 - +0.9
654,983 + -0.7
654,991 - -1.2
654,991 - +2.0
655,034 - +1.8
655,105 - -0.6
655,124 + -0.9
655,134 + -2.9
655,158 + -1.4
655,195 - -1.4
655,212 + -1.7
655,219 + -3.2
655,222 - +1.8
655,227 - MPMX20_00631 0.10 -2.7
655,229 - MPMX20_00631 0.10 +2.0
655,234 - MPMX20_00631 0.10 -0.1
655,262 + MPMX20_00631 0.12 +0.3
655,270 - MPMX20_00631 0.12 -0.6
655,270 - MPMX20_00631 0.12 +0.5
655,270 - MPMX20_00631 0.12 -1.9
655,308 - MPMX20_00631 0.14 +0.1
655,310 + MPMX20_00631 0.14 +0.2
655,333 + MPMX20_00631 0.15 +1.7
655,352 + MPMX20_00631 0.16 -0.8
655,360 - MPMX20_00631 0.16 +2.0
655,360 - MPMX20_00631 0.16 +0.7
655,366 - MPMX20_00631 0.16 -1.2
655,393 + MPMX20_00631 0.18 -0.5
655,411 - MPMX20_00631 0.19 +0.7
655,411 - MPMX20_00631 0.19 +0.6
655,502 + MPMX20_00631 0.23 -2.6
655,502 - MPMX20_00631 0.23 -0.3
655,504 + MPMX20_00631 0.23 -0.3
655,524 + MPMX20_00631 0.24 +1.6
655,537 - MPMX20_00631 0.24 -1.0
655,597 + MPMX20_00631 0.27 -0.3
655,628 + MPMX20_00631 0.29 +0.0
655,782 + MPMX20_00631 0.36 +1.6
655,782 + MPMX20_00631 0.36 -0.5
655,782 + MPMX20_00631 0.36 +0.7
655,782 + MPMX20_00631 0.36 -3.2
655,782 + MPMX20_00631 0.36 +0.1
655,782 + MPMX20_00631 0.36 -3.3
655,782 + MPMX20_00631 0.36 -2.2
655,782 + MPMX20_00631 0.36 +1.0
655,782 + MPMX20_00631 0.36 +0.1
655,782 + MPMX20_00631 0.36 +0.0
655,787 + MPMX20_00631 0.36 -0.3
655,790 - MPMX20_00631 0.36 -1.6
655,790 - MPMX20_00631 0.36 +0.4
655,790 - MPMX20_00631 0.36 -0.9
655,790 - MPMX20_00631 0.36 +0.9
655,790 - MPMX20_00631 0.36 +1.8
655,790 - MPMX20_00631 0.36 +2.5
655,824 - MPMX20_00631 0.38 +2.2
655,842 - MPMX20_00631 0.39 -2.8
655,849 + MPMX20_00631 0.39 +0.5
655,850 + MPMX20_00631 0.39 -2.4
655,855 + MPMX20_00631 0.39 -0.6
655,888 + MPMX20_00631 0.41 -0.3
655,913 - MPMX20_00631 0.42 +0.5
655,920 + MPMX20_00631 0.42 +1.9
655,956 + MPMX20_00631 0.44 +1.1
655,959 - MPMX20_00631 0.44 -1.0
655,959 - MPMX20_00631 0.44 +1.2
655,964 - MPMX20_00631 0.44 -0.4

Or see this region's nucleotide sequence