Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04595 and MPMX20_04596 are separated by 185 nucleotides MPMX20_04596 and MPMX20_04597 are separated by 11 nucleotides
MPMX20_04595: MPMX20_04595 - Glutamine synthetase, at 4,809,190 to 4,810,599
_04595
MPMX20_04596: MPMX20_04596 - Sensory histidine kinase/phosphatase NtrB, at 4,810,785 to 4,811,834
_04596
MPMX20_04597: MPMX20_04597 - DNA-binding transcriptional regulator NtrC, at 4,811,846 to 4,813,258
_04597
Position (kb)
4810
4811
4812 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 4809.923 kb on + strand, within MPMX20_04595 at 4809.924 kb on - strand, within MPMX20_04595 at 4810.133 kb on - strand, within MPMX20_04595 at 4810.584 kb on + strand at 4810.592 kb on - strand at 4810.666 kb on + strand at 4810.774 kb on - strand at 4810.776 kb on - strand at 4810.776 kb on - strand at 4810.786 kb on - strand at 4810.788 kb on - strand at 4810.802 kb on + strand at 4810.802 kb on + strand at 4810.802 kb on + strand at 4810.802 kb on + strand at 4810.802 kb on + strand at 4810.820 kb on - strand at 4810.840 kb on + strand at 4810.925 kb on + strand, within MPMX20_04596 at 4810.975 kb on + strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.009 kb on - strand, within MPMX20_04596 at 4811.033 kb on + strand, within MPMX20_04596 at 4811.041 kb on - strand, within MPMX20_04596 at 4811.041 kb on - strand, within MPMX20_04596 at 4811.089 kb on + strand, within MPMX20_04596 at 4811.089 kb on + strand, within MPMX20_04596 at 4811.097 kb on - strand, within MPMX20_04596 at 4811.191 kb on - strand, within MPMX20_04596 at 4811.231 kb on - strand, within MPMX20_04596 at 4811.261 kb on + strand, within MPMX20_04596 at 4811.261 kb on + strand, within MPMX20_04596 at 4811.280 kb on + strand, within MPMX20_04596 at 4811.280 kb on + strand, within MPMX20_04596 at 4811.280 kb on + strand, within MPMX20_04596 at 4811.282 kb on + strand, within MPMX20_04596 at 4811.285 kb on + strand, within MPMX20_04596 at 4811.344 kb on + strand, within MPMX20_04596 at 4811.344 kb on + strand, within MPMX20_04596 at 4811.352 kb on - strand, within MPMX20_04596 at 4811.352 kb on - strand, within MPMX20_04596 at 4811.352 kb on - strand, within MPMX20_04596 at 4811.367 kb on - strand, within MPMX20_04596 at 4811.434 kb on + strand, within MPMX20_04596 at 4811.442 kb on - strand, within MPMX20_04596 at 4811.485 kb on + strand, within MPMX20_04596 at 4811.581 kb on + strand, within MPMX20_04596 at 4811.583 kb on - strand, within MPMX20_04596 at 4811.598 kb on - strand, within MPMX20_04596 at 4811.670 kb on + strand, within MPMX20_04596 at 4811.670 kb on + strand, within MPMX20_04596 at 4811.670 kb on + strand, within MPMX20_04596 at 4811.674 kb on + strand, within MPMX20_04596 at 4811.684 kb on + strand, within MPMX20_04596 at 4811.687 kb on - strand, within MPMX20_04596 at 4811.692 kb on - strand, within MPMX20_04596 at 4811.721 kb on + strand, within MPMX20_04596 at 4811.721 kb on + strand, within MPMX20_04596 at 4811.722 kb on + strand, within MPMX20_04596 at 4811.724 kb on - strand, within MPMX20_04596 at 4811.727 kb on + strand, within MPMX20_04596 at 4811.729 kb on - strand, within MPMX20_04596 at 4811.735 kb on - strand at 4811.735 kb on - strand at 4811.796 kb on - strand at 4811.796 kb on - strand at 4811.844 kb on - strand at 4811.860 kb on + strand at 4811.878 kb on + strand at 4811.886 kb on - strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.924 kb on + strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4811.932 kb on - strand at 4812.038 kb on - strand, within MPMX20_04597 at 4812.039 kb on + strand, within MPMX20_04597 at 4812.424 kb on - strand, within MPMX20_04597 at 4812.438 kb on - strand, within MPMX20_04597 at 4812.525 kb on + strand, within MPMX20_04597 at 4812.535 kb on + strand, within MPMX20_04597 at 4812.535 kb on + strand, within MPMX20_04597 at 4812.543 kb on - strand, within MPMX20_04597 at 4812.578 kb on - strand, within MPMX20_04597 at 4812.587 kb on + strand, within MPMX20_04597 at 4812.595 kb on - strand, within MPMX20_04597 at 4812.595 kb on - strand, within MPMX20_04597 at 4812.595 kb on - strand, within MPMX20_04597 at 4812.716 kb on + strand, within MPMX20_04597 at 4812.744 kb on + strand, within MPMX20_04597
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 4,809,923 + MPMX20_04595 0.52 -1.9 4,809,924 - MPMX20_04595 0.52 -0.5 4,810,133 - MPMX20_04595 0.67 -0.7 4,810,584 + -2.0 4,810,592 - -2.4 4,810,666 + -0.1 4,810,774 - -4.9 4,810,776 - -4.5 4,810,776 - -1.3 4,810,786 - -2.2 4,810,788 - +0.3 4,810,802 + -0.4 4,810,802 + -1.3 4,810,802 + -2.2 4,810,802 + -0.0 4,810,802 + -1.3 4,810,820 - -2.2 4,810,840 + -1.8 4,810,925 + MPMX20_04596 0.13 -0.0 4,810,975 + MPMX20_04596 0.18 -0.7 4,811,009 - MPMX20_04596 0.21 -1.5 4,811,009 - MPMX20_04596 0.21 -2.2 4,811,009 - MPMX20_04596 0.21 -3.2 4,811,009 - MPMX20_04596 0.21 -3.8 4,811,009 - MPMX20_04596 0.21 -0.3 4,811,009 - MPMX20_04596 0.21 -3.8 4,811,033 + MPMX20_04596 0.24 -1.4 4,811,041 - MPMX20_04596 0.24 -0.7 4,811,041 - MPMX20_04596 0.24 -1.7 4,811,089 + MPMX20_04596 0.29 -1.0 4,811,089 + MPMX20_04596 0.29 -3.2 4,811,097 - MPMX20_04596 0.30 -1.9 4,811,191 - MPMX20_04596 0.39 -3.0 4,811,231 - MPMX20_04596 0.42 -2.9 4,811,261 + MPMX20_04596 0.45 -1.3 4,811,261 + MPMX20_04596 0.45 +0.3 4,811,280 + MPMX20_04596 0.47 -2.0 4,811,280 + MPMX20_04596 0.47 -3.3 4,811,280 + MPMX20_04596 0.47 -3.6 4,811,282 + MPMX20_04596 0.47 -4.4 4,811,285 + MPMX20_04596 0.48 -3.1 4,811,344 + MPMX20_04596 0.53 -4.3 4,811,344 + MPMX20_04596 0.53 -0.9 4,811,352 - MPMX20_04596 0.54 -0.0 4,811,352 - MPMX20_04596 0.54 -3.0 4,811,352 - MPMX20_04596 0.54 -3.1 4,811,367 - MPMX20_04596 0.55 -1.5 4,811,434 + MPMX20_04596 0.62 -4.7 4,811,442 - MPMX20_04596 0.63 -3.4 4,811,485 + MPMX20_04596 0.67 -3.4 4,811,581 + MPMX20_04596 0.76 -0.7 4,811,583 - MPMX20_04596 0.76 -3.1 4,811,598 - MPMX20_04596 0.77 -1.9 4,811,670 + MPMX20_04596 0.84 -0.5 4,811,670 + MPMX20_04596 0.84 -0.9 4,811,670 + MPMX20_04596 0.84 -2.2 4,811,674 + MPMX20_04596 0.85 -2.2 4,811,684 + MPMX20_04596 0.86 -0.9 4,811,687 - MPMX20_04596 0.86 -3.4 4,811,692 - MPMX20_04596 0.86 -0.3 4,811,721 + MPMX20_04596 0.89 -3.5 4,811,721 + MPMX20_04596 0.89 -1.1 4,811,722 + MPMX20_04596 0.89 -2.6 4,811,724 - MPMX20_04596 0.89 -3.4 4,811,727 + MPMX20_04596 0.90 -3.2 4,811,729 - MPMX20_04596 0.90 -2.0 4,811,735 - -3.1 4,811,735 - -2.1 4,811,796 - -3.9 4,811,796 - -0.0 4,811,844 - -3.0 4,811,860 + -2.1 4,811,878 + -1.4 4,811,886 - -3.0 4,811,924 + -2.6 4,811,924 + -1.0 4,811,924 + -3.0 4,811,924 + -2.7 4,811,924 + -2.7 4,811,924 + -0.3 4,811,924 + -2.8 4,811,924 + -2.3 4,811,932 - -4.1 4,811,932 - -1.4 4,811,932 - -3.1 4,811,932 - -2.5 4,811,932 - -0.9 4,811,932 - -1.9 4,811,932 - -3.8 4,812,038 - MPMX20_04597 0.14 -2.9 4,812,039 + MPMX20_04597 0.14 -2.4 4,812,424 - MPMX20_04597 0.41 -4.1 4,812,438 - MPMX20_04597 0.42 -2.8 4,812,525 + MPMX20_04597 0.48 -0.9 4,812,535 + MPMX20_04597 0.49 -0.3 4,812,535 + MPMX20_04597 0.49 -3.0 4,812,543 - MPMX20_04597 0.49 -1.5 4,812,578 - MPMX20_04597 0.52 +0.7 4,812,587 + MPMX20_04597 0.52 -1.3 4,812,595 - MPMX20_04597 0.53 -3.6 4,812,595 - MPMX20_04597 0.53 -0.0 4,812,595 - MPMX20_04597 0.53 -3.7 4,812,716 + MPMX20_04597 0.62 -2.6 4,812,744 + MPMX20_04597 0.64 -3.2
Or see this region's nucleotide sequence