Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04596

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04595 and MPMX20_04596 are separated by 185 nucleotidesMPMX20_04596 and MPMX20_04597 are separated by 11 nucleotides MPMX20_04595: MPMX20_04595 - Glutamine synthetase, at 4,809,190 to 4,810,599 _04595 MPMX20_04596: MPMX20_04596 - Sensory histidine kinase/phosphatase NtrB, at 4,810,785 to 4,811,834 _04596 MPMX20_04597: MPMX20_04597 - DNA-binding transcriptional regulator NtrC, at 4,811,846 to 4,813,258 _04597 Position (kb) 4810 4811 4812Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 4809.923 kb on + strand, within MPMX20_04595at 4809.924 kb on - strand, within MPMX20_04595at 4810.133 kb on - strand, within MPMX20_04595at 4810.584 kb on + strandat 4810.592 kb on - strandat 4810.666 kb on + strandat 4810.774 kb on - strandat 4810.776 kb on - strandat 4810.776 kb on - strandat 4810.786 kb on - strandat 4810.788 kb on - strandat 4810.802 kb on + strandat 4810.802 kb on + strandat 4810.802 kb on + strandat 4810.802 kb on + strandat 4810.802 kb on + strandat 4810.820 kb on - strandat 4810.840 kb on + strandat 4810.925 kb on + strand, within MPMX20_04596at 4810.975 kb on + strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.009 kb on - strand, within MPMX20_04596at 4811.033 kb on + strand, within MPMX20_04596at 4811.041 kb on - strand, within MPMX20_04596at 4811.041 kb on - strand, within MPMX20_04596at 4811.089 kb on + strand, within MPMX20_04596at 4811.089 kb on + strand, within MPMX20_04596at 4811.097 kb on - strand, within MPMX20_04596at 4811.191 kb on - strand, within MPMX20_04596at 4811.231 kb on - strand, within MPMX20_04596at 4811.261 kb on + strand, within MPMX20_04596at 4811.261 kb on + strand, within MPMX20_04596at 4811.280 kb on + strand, within MPMX20_04596at 4811.280 kb on + strand, within MPMX20_04596at 4811.280 kb on + strand, within MPMX20_04596at 4811.282 kb on + strand, within MPMX20_04596at 4811.285 kb on + strand, within MPMX20_04596at 4811.344 kb on + strand, within MPMX20_04596at 4811.344 kb on + strand, within MPMX20_04596at 4811.352 kb on - strand, within MPMX20_04596at 4811.352 kb on - strand, within MPMX20_04596at 4811.352 kb on - strand, within MPMX20_04596at 4811.367 kb on - strand, within MPMX20_04596at 4811.434 kb on + strand, within MPMX20_04596at 4811.442 kb on - strand, within MPMX20_04596at 4811.485 kb on + strand, within MPMX20_04596at 4811.581 kb on + strand, within MPMX20_04596at 4811.583 kb on - strand, within MPMX20_04596at 4811.598 kb on - strand, within MPMX20_04596at 4811.670 kb on + strand, within MPMX20_04596at 4811.670 kb on + strand, within MPMX20_04596at 4811.670 kb on + strand, within MPMX20_04596at 4811.674 kb on + strand, within MPMX20_04596at 4811.684 kb on + strand, within MPMX20_04596at 4811.687 kb on - strand, within MPMX20_04596at 4811.692 kb on - strand, within MPMX20_04596at 4811.721 kb on + strand, within MPMX20_04596at 4811.721 kb on + strand, within MPMX20_04596at 4811.722 kb on + strand, within MPMX20_04596at 4811.724 kb on - strand, within MPMX20_04596at 4811.727 kb on + strand, within MPMX20_04596at 4811.729 kb on - strand, within MPMX20_04596at 4811.735 kb on - strandat 4811.735 kb on - strandat 4811.796 kb on - strandat 4811.796 kb on - strandat 4811.844 kb on - strandat 4811.860 kb on + strandat 4811.878 kb on + strandat 4811.886 kb on - strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.924 kb on + strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4811.932 kb on - strandat 4812.038 kb on - strand, within MPMX20_04597at 4812.039 kb on + strand, within MPMX20_04597at 4812.424 kb on - strand, within MPMX20_04597at 4812.438 kb on - strand, within MPMX20_04597at 4812.525 kb on + strand, within MPMX20_04597at 4812.535 kb on + strand, within MPMX20_04597at 4812.535 kb on + strand, within MPMX20_04597at 4812.543 kb on - strand, within MPMX20_04597at 4812.578 kb on - strand, within MPMX20_04597at 4812.587 kb on + strand, within MPMX20_04597at 4812.595 kb on - strand, within MPMX20_04597at 4812.595 kb on - strand, within MPMX20_04597at 4812.595 kb on - strand, within MPMX20_04597at 4812.716 kb on + strand, within MPMX20_04597at 4812.744 kb on + strand, within MPMX20_04597

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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4,809,923 + MPMX20_04595 0.52 -1.9
4,809,924 - MPMX20_04595 0.52 -0.5
4,810,133 - MPMX20_04595 0.67 -0.7
4,810,584 + -2.0
4,810,592 - -2.4
4,810,666 + -0.1
4,810,774 - -4.9
4,810,776 - -4.5
4,810,776 - -1.3
4,810,786 - -2.2
4,810,788 - +0.3
4,810,802 + -0.4
4,810,802 + -1.3
4,810,802 + -2.2
4,810,802 + -0.0
4,810,802 + -1.3
4,810,820 - -2.2
4,810,840 + -1.8
4,810,925 + MPMX20_04596 0.13 -0.0
4,810,975 + MPMX20_04596 0.18 -0.7
4,811,009 - MPMX20_04596 0.21 -1.5
4,811,009 - MPMX20_04596 0.21 -2.2
4,811,009 - MPMX20_04596 0.21 -3.2
4,811,009 - MPMX20_04596 0.21 -3.8
4,811,009 - MPMX20_04596 0.21 -0.3
4,811,009 - MPMX20_04596 0.21 -3.8
4,811,033 + MPMX20_04596 0.24 -1.4
4,811,041 - MPMX20_04596 0.24 -0.7
4,811,041 - MPMX20_04596 0.24 -1.7
4,811,089 + MPMX20_04596 0.29 -1.0
4,811,089 + MPMX20_04596 0.29 -3.2
4,811,097 - MPMX20_04596 0.30 -1.9
4,811,191 - MPMX20_04596 0.39 -3.0
4,811,231 - MPMX20_04596 0.42 -2.9
4,811,261 + MPMX20_04596 0.45 -1.3
4,811,261 + MPMX20_04596 0.45 +0.3
4,811,280 + MPMX20_04596 0.47 -2.0
4,811,280 + MPMX20_04596 0.47 -3.3
4,811,280 + MPMX20_04596 0.47 -3.6
4,811,282 + MPMX20_04596 0.47 -4.4
4,811,285 + MPMX20_04596 0.48 -3.1
4,811,344 + MPMX20_04596 0.53 -4.3
4,811,344 + MPMX20_04596 0.53 -0.9
4,811,352 - MPMX20_04596 0.54 -0.0
4,811,352 - MPMX20_04596 0.54 -3.0
4,811,352 - MPMX20_04596 0.54 -3.1
4,811,367 - MPMX20_04596 0.55 -1.5
4,811,434 + MPMX20_04596 0.62 -4.7
4,811,442 - MPMX20_04596 0.63 -3.4
4,811,485 + MPMX20_04596 0.67 -3.4
4,811,581 + MPMX20_04596 0.76 -0.7
4,811,583 - MPMX20_04596 0.76 -3.1
4,811,598 - MPMX20_04596 0.77 -1.9
4,811,670 + MPMX20_04596 0.84 -0.5
4,811,670 + MPMX20_04596 0.84 -0.9
4,811,670 + MPMX20_04596 0.84 -2.2
4,811,674 + MPMX20_04596 0.85 -2.2
4,811,684 + MPMX20_04596 0.86 -0.9
4,811,687 - MPMX20_04596 0.86 -3.4
4,811,692 - MPMX20_04596 0.86 -0.3
4,811,721 + MPMX20_04596 0.89 -3.5
4,811,721 + MPMX20_04596 0.89 -1.1
4,811,722 + MPMX20_04596 0.89 -2.6
4,811,724 - MPMX20_04596 0.89 -3.4
4,811,727 + MPMX20_04596 0.90 -3.2
4,811,729 - MPMX20_04596 0.90 -2.0
4,811,735 - -3.1
4,811,735 - -2.1
4,811,796 - -3.9
4,811,796 - -0.0
4,811,844 - -3.0
4,811,860 + -2.1
4,811,878 + -1.4
4,811,886 - -3.0
4,811,924 + -2.6
4,811,924 + -1.0
4,811,924 + -3.0
4,811,924 + -2.7
4,811,924 + -2.7
4,811,924 + -0.3
4,811,924 + -2.8
4,811,924 + -2.3
4,811,932 - -4.1
4,811,932 - -1.4
4,811,932 - -3.1
4,811,932 - -2.5
4,811,932 - -0.9
4,811,932 - -1.9
4,811,932 - -3.8
4,812,038 - MPMX20_04597 0.14 -2.9
4,812,039 + MPMX20_04597 0.14 -2.4
4,812,424 - MPMX20_04597 0.41 -4.1
4,812,438 - MPMX20_04597 0.42 -2.8
4,812,525 + MPMX20_04597 0.48 -0.9
4,812,535 + MPMX20_04597 0.49 -0.3
4,812,535 + MPMX20_04597 0.49 -3.0
4,812,543 - MPMX20_04597 0.49 -1.5
4,812,578 - MPMX20_04597 0.52 +0.7
4,812,587 + MPMX20_04597 0.52 -1.3
4,812,595 - MPMX20_04597 0.53 -3.6
4,812,595 - MPMX20_04597 0.53 -0.0
4,812,595 - MPMX20_04597 0.53 -3.7
4,812,716 + MPMX20_04597 0.62 -2.6
4,812,744 + MPMX20_04597 0.64 -3.2

Or see this region's nucleotide sequence