Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03040 and MPMX20_03041 overlap by 1 nucleotides MPMX20_03041 and MPMX20_03042 are separated by 22 nucleotides MPMX20_03042 and MPMX20_03043 are separated by 2 nucleotides MPMX20_03043 and MPMX20_03044 are separated by 6 nucleotides
MPMX20_03040: MPMX20_03040 - Serine acetyltransferase, at 3,177,997 to 3,178,488
_03040
MPMX20_03041: MPMX20_03041 - hypothetical protein, at 3,178,488 to 3,179,330
_03041
MPMX20_03042: MPMX20_03042 - Tyrosine-protein kinase wzc, at 3,179,353 to 3,181,515
_03042
MPMX20_03043: MPMX20_03043 - Low molecular weight protein-tyrosine-phosphatase Wzb, at 3,181,518 to 3,181,961
_03043
MPMX20_03044: MPMX20_03044 - hypothetical protein, at 3,181,968 to 3,183,107
_03044
Position (kb)
3179
3180
3181
3182 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3178.372 kb on - strand, within MPMX20_03040 at 3178.426 kb on + strand, within MPMX20_03040 at 3178.446 kb on + strand at 3178.452 kb on + strand at 3178.452 kb on + strand at 3178.452 kb on + strand at 3178.452 kb on + strand at 3178.462 kb on - strand at 3178.510 kb on + strand at 3178.550 kb on + strand at 3178.578 kb on + strand, within MPMX20_03041 at 3178.755 kb on + strand, within MPMX20_03041 at 3178.788 kb on - strand, within MPMX20_03041 at 3178.803 kb on - strand, within MPMX20_03041 at 3178.803 kb on - strand, within MPMX20_03041 at 3178.807 kb on + strand, within MPMX20_03041 at 3178.823 kb on + strand, within MPMX20_03041 at 3178.831 kb on - strand, within MPMX20_03041 at 3178.843 kb on + strand, within MPMX20_03041 at 3178.856 kb on - strand, within MPMX20_03041 at 3178.999 kb on - strand, within MPMX20_03041 at 3179.058 kb on + strand, within MPMX20_03041 at 3179.059 kb on + strand, within MPMX20_03041 at 3179.071 kb on + strand, within MPMX20_03041 at 3179.071 kb on + strand, within MPMX20_03041 at 3179.071 kb on + strand, within MPMX20_03041 at 3179.079 kb on - strand, within MPMX20_03041 at 3179.079 kb on - strand, within MPMX20_03041 at 3179.094 kb on + strand, within MPMX20_03041 at 3179.102 kb on - strand, within MPMX20_03041 at 3179.102 kb on - strand, within MPMX20_03041 at 3179.132 kb on - strand, within MPMX20_03041 at 3179.200 kb on - strand, within MPMX20_03041 at 3179.202 kb on + strand, within MPMX20_03041 at 3179.202 kb on + strand, within MPMX20_03041 at 3179.204 kb on + strand, within MPMX20_03041 at 3179.230 kb on + strand, within MPMX20_03041 at 3179.316 kb on + strand at 3179.326 kb on + strand at 3179.326 kb on + strand at 3179.326 kb on + strand at 3179.334 kb on - strand at 3179.334 kb on - strand at 3179.334 kb on - strand at 3179.334 kb on - strand at 3179.348 kb on + strand at 3179.360 kb on + strand at 3179.360 kb on - strand at 3179.433 kb on + strand at 3179.481 kb on - strand at 3179.490 kb on - strand at 3179.626 kb on + strand, within MPMX20_03042 at 3179.626 kb on + strand, within MPMX20_03042 at 3179.663 kb on + strand, within MPMX20_03042 at 3179.688 kb on - strand, within MPMX20_03042 at 3179.693 kb on - strand, within MPMX20_03042 at 3179.744 kb on - strand, within MPMX20_03042 at 3179.747 kb on + strand, within MPMX20_03042 at 3179.789 kb on + strand, within MPMX20_03042 at 3179.797 kb on - strand, within MPMX20_03042 at 3179.806 kb on + strand, within MPMX20_03042 at 3179.806 kb on + strand, within MPMX20_03042 at 3179.807 kb on + strand, within MPMX20_03042 at 3179.807 kb on + strand, within MPMX20_03042 at 3179.807 kb on + strand, within MPMX20_03042 at 3179.813 kb on + strand, within MPMX20_03042 at 3179.815 kb on - strand, within MPMX20_03042 at 3179.823 kb on + strand, within MPMX20_03042 at 3179.823 kb on + strand, within MPMX20_03042 at 3179.831 kb on - strand, within MPMX20_03042 at 3179.875 kb on - strand, within MPMX20_03042 at 3179.885 kb on - strand, within MPMX20_03042 at 3179.887 kb on + strand, within MPMX20_03042 at 3179.915 kb on + strand, within MPMX20_03042 at 3179.934 kb on - strand, within MPMX20_03042 at 3180.006 kb on - strand, within MPMX20_03042 at 3180.113 kb on + strand, within MPMX20_03042 at 3180.128 kb on - strand, within MPMX20_03042 at 3180.164 kb on + strand, within MPMX20_03042 at 3180.224 kb on - strand, within MPMX20_03042 at 3180.224 kb on - strand, within MPMX20_03042 at 3180.234 kb on - strand, within MPMX20_03042 at 3180.243 kb on - strand, within MPMX20_03042 at 3180.260 kb on + strand, within MPMX20_03042 at 3180.261 kb on + strand, within MPMX20_03042 at 3180.282 kb on + strand, within MPMX20_03042 at 3180.282 kb on + strand, within MPMX20_03042 at 3180.299 kb on + strand, within MPMX20_03042 at 3180.308 kb on + strand, within MPMX20_03042 at 3180.308 kb on + strand, within MPMX20_03042 at 3180.308 kb on + strand, within MPMX20_03042 at 3180.364 kb on - strand, within MPMX20_03042 at 3180.413 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.486 kb on + strand, within MPMX20_03042 at 3180.490 kb on + strand, within MPMX20_03042 at 3180.494 kb on - strand, within MPMX20_03042 at 3180.494 kb on - strand, within MPMX20_03042 at 3180.512 kb on + strand, within MPMX20_03042 at 3180.512 kb on + strand, within MPMX20_03042 at 3180.512 kb on + strand, within MPMX20_03042 at 3180.512 kb on + strand, within MPMX20_03042 at 3180.537 kb on + strand, within MPMX20_03042 at 3180.564 kb on + strand, within MPMX20_03042 at 3180.572 kb on - strand, within MPMX20_03042 at 3180.572 kb on - strand, within MPMX20_03042 at 3180.664 kb on + strand, within MPMX20_03042 at 3180.664 kb on + strand, within MPMX20_03042 at 3180.673 kb on + strand, within MPMX20_03042 at 3180.744 kb on + strand, within MPMX20_03042 at 3180.755 kb on + strand, within MPMX20_03042 at 3180.758 kb on - strand, within MPMX20_03042 at 3180.798 kb on - strand, within MPMX20_03042 at 3180.833 kb on + strand, within MPMX20_03042 at 3180.868 kb on + strand, within MPMX20_03042 at 3180.868 kb on + strand, within MPMX20_03042 at 3180.896 kb on - strand, within MPMX20_03042 at 3180.937 kb on - strand, within MPMX20_03042 at 3180.938 kb on - strand, within MPMX20_03042 at 3180.987 kb on - strand, within MPMX20_03042 at 3181.056 kb on + strand, within MPMX20_03042 at 3181.056 kb on + strand, within MPMX20_03042 at 3181.056 kb on + strand, within MPMX20_03042 at 3181.063 kb on + strand, within MPMX20_03042 at 3181.064 kb on - strand, within MPMX20_03042 at 3181.115 kb on + strand, within MPMX20_03042 at 3181.185 kb on + strand, within MPMX20_03042 at 3181.191 kb on + strand, within MPMX20_03042 at 3181.208 kb on + strand, within MPMX20_03042 at 3181.216 kb on - strand, within MPMX20_03042 at 3181.216 kb on - strand, within MPMX20_03042 at 3181.291 kb on + strand, within MPMX20_03042 at 3181.299 kb on - strand at 3181.346 kb on - strand at 3181.356 kb on - strand at 3181.356 kb on - strand at 3181.356 kb on - strand at 3181.439 kb on + strand at 3181.521 kb on + strand at 3181.573 kb on - strand, within MPMX20_03043 at 3181.575 kb on + strand, within MPMX20_03043 at 3181.583 kb on - strand, within MPMX20_03043 at 3181.583 kb on - strand, within MPMX20_03043 at 3181.694 kb on + strand, within MPMX20_03043 at 3181.694 kb on + strand, within MPMX20_03043 at 3181.701 kb on + strand, within MPMX20_03043 at 3181.853 kb on + strand, within MPMX20_03043 at 3181.853 kb on + strand, within MPMX20_03043 at 3181.856 kb on - strand, within MPMX20_03043 at 3181.861 kb on - strand, within MPMX20_03043 at 3181.879 kb on + strand, within MPMX20_03043 at 3181.882 kb on - strand, within MPMX20_03043 at 3181.907 kb on - strand, within MPMX20_03043 at 3182.070 kb on + strand at 3182.153 kb on + strand, within MPMX20_03044 at 3182.184 kb on + strand, within MPMX20_03044 at 3182.184 kb on + strand, within MPMX20_03044 at 3182.192 kb on - strand, within MPMX20_03044 at 3182.192 kb on - strand, within MPMX20_03044 at 3182.192 kb on - strand, within MPMX20_03044 at 3182.225 kb on + strand, within MPMX20_03044 at 3182.225 kb on + strand, within MPMX20_03044 at 3182.233 kb on - strand, within MPMX20_03044 at 3182.233 kb on - strand, within MPMX20_03044 at 3182.240 kb on + strand, within MPMX20_03044 at 3182.240 kb on + strand, within MPMX20_03044 at 3182.240 kb on + strand, within MPMX20_03044 at 3182.240 kb on + strand, within MPMX20_03044 at 3182.248 kb on - strand, within MPMX20_03044 at 3182.259 kb on + strand, within MPMX20_03044 at 3182.259 kb on + strand, within MPMX20_03044 at 3182.259 kb on + strand, within MPMX20_03044 at 3182.262 kb on - strand, within MPMX20_03044 at 3182.276 kb on + strand, within MPMX20_03044 at 3182.279 kb on - strand, within MPMX20_03044 at 3182.279 kb on - strand, within MPMX20_03044 at 3182.279 kb on - strand, within MPMX20_03044 at 3182.279 kb on - strand, within MPMX20_03044 at 3182.339 kb on + strand, within MPMX20_03044 at 3182.385 kb on + strand, within MPMX20_03044 at 3182.394 kb on + strand, within MPMX20_03044 at 3182.405 kb on + strand, within MPMX20_03044 at 3182.473 kb on - strand, within MPMX20_03044 at 3182.473 kb on - strand, within MPMX20_03044 at 3182.478 kb on - strand, within MPMX20_03044
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,178,372 - MPMX20_03040 0.76 -0.1 3,178,426 + MPMX20_03040 0.87 -0.9 3,178,446 + -0.3 3,178,452 + -0.3 3,178,452 + +0.3 3,178,452 + -2.2 3,178,452 + -0.6 3,178,462 - -0.9 3,178,510 + -0.3 3,178,550 + -0.9 3,178,578 + MPMX20_03041 0.11 +0.5 3,178,755 + MPMX20_03041 0.32 -1.5 3,178,788 - MPMX20_03041 0.36 -0.4 3,178,803 - MPMX20_03041 0.37 -1.4 3,178,803 - MPMX20_03041 0.37 -2.3 3,178,807 + MPMX20_03041 0.38 -1.1 3,178,823 + MPMX20_03041 0.40 +0.8 3,178,831 - MPMX20_03041 0.41 -0.6 3,178,843 + MPMX20_03041 0.42 -0.4 3,178,856 - MPMX20_03041 0.44 -2.1 3,178,999 - MPMX20_03041 0.61 +0.3 3,179,058 + MPMX20_03041 0.68 -0.9 3,179,059 + MPMX20_03041 0.68 -0.6 3,179,071 + MPMX20_03041 0.69 -1.3 3,179,071 + MPMX20_03041 0.69 -1.0 3,179,071 + MPMX20_03041 0.69 -2.1 3,179,079 - MPMX20_03041 0.70 -0.2 3,179,079 - MPMX20_03041 0.70 -2.0 3,179,094 + MPMX20_03041 0.72 -0.9 3,179,102 - MPMX20_03041 0.73 -2.2 3,179,102 - MPMX20_03041 0.73 +0.3 3,179,132 - MPMX20_03041 0.76 +0.0 3,179,200 - MPMX20_03041 0.84 -3.2 3,179,202 + MPMX20_03041 0.85 -1.3 3,179,202 + MPMX20_03041 0.85 -0.6 3,179,204 + MPMX20_03041 0.85 +0.1 3,179,230 + MPMX20_03041 0.88 +0.5 3,179,316 + -1.9 3,179,326 + +1.0 3,179,326 + +1.0 3,179,326 + -2.3 3,179,334 - -1.6 3,179,334 - +0.3 3,179,334 - -0.7 3,179,334 - +1.4 3,179,348 + -0.3 3,179,360 + -1.3 3,179,360 - +0.4 3,179,433 + +0.1 3,179,481 - -2.0 3,179,490 - +0.7 3,179,626 + MPMX20_03042 0.13 -1.3 3,179,626 + MPMX20_03042 0.13 +0.3 3,179,663 + MPMX20_03042 0.14 -0.4 3,179,688 - MPMX20_03042 0.15 -1.9 3,179,693 - MPMX20_03042 0.16 -1.1 3,179,744 - MPMX20_03042 0.18 -1.9 3,179,747 + MPMX20_03042 0.18 -0.9 3,179,789 + MPMX20_03042 0.20 -1.3 3,179,797 - MPMX20_03042 0.21 -0.2 3,179,806 + MPMX20_03042 0.21 -2.6 3,179,806 + MPMX20_03042 0.21 +0.7 3,179,807 + MPMX20_03042 0.21 +0.8 3,179,807 + MPMX20_03042 0.21 -0.6 3,179,807 + MPMX20_03042 0.21 -1.1 3,179,813 + MPMX20_03042 0.21 +0.7 3,179,815 - MPMX20_03042 0.21 -0.9 3,179,823 + MPMX20_03042 0.22 -0.2 3,179,823 + MPMX20_03042 0.22 -2.9 3,179,831 - MPMX20_03042 0.22 -0.3 3,179,875 - MPMX20_03042 0.24 -0.3 3,179,885 - MPMX20_03042 0.25 -1.7 3,179,887 + MPMX20_03042 0.25 -2.5 3,179,915 + MPMX20_03042 0.26 -2.4 3,179,934 - MPMX20_03042 0.27 -0.2 3,180,006 - MPMX20_03042 0.30 -1.1 3,180,113 + MPMX20_03042 0.35 -3.1 3,180,128 - MPMX20_03042 0.36 +0.7 3,180,164 + MPMX20_03042 0.37 -0.4 3,180,224 - MPMX20_03042 0.40 +0.7 3,180,224 - MPMX20_03042 0.40 -1.5 3,180,234 - MPMX20_03042 0.41 +0.5 3,180,243 - MPMX20_03042 0.41 -1.9 3,180,260 + MPMX20_03042 0.42 -1.3 3,180,261 + MPMX20_03042 0.42 -1.7 3,180,282 + MPMX20_03042 0.43 -0.4 3,180,282 + MPMX20_03042 0.43 -2.2 3,180,299 + MPMX20_03042 0.44 -0.8 3,180,308 + MPMX20_03042 0.44 -1.8 3,180,308 + MPMX20_03042 0.44 -0.5 3,180,308 + MPMX20_03042 0.44 -0.6 3,180,364 - MPMX20_03042 0.47 -2.6 3,180,413 + MPMX20_03042 0.49 -2.2 3,180,486 + MPMX20_03042 0.52 -1.3 3,180,486 + MPMX20_03042 0.52 +0.7 3,180,486 + MPMX20_03042 0.52 +0.3 3,180,486 + MPMX20_03042 0.52 -3.6 3,180,486 + MPMX20_03042 0.52 -2.0 3,180,486 + MPMX20_03042 0.52 -0.1 3,180,486 + MPMX20_03042 0.52 -1.2 3,180,486 + MPMX20_03042 0.52 -1.1 3,180,486 + MPMX20_03042 0.52 +2.7 3,180,486 + MPMX20_03042 0.52 -1.8 3,180,490 + MPMX20_03042 0.53 -0.9 3,180,494 - MPMX20_03042 0.53 +0.1 3,180,494 - MPMX20_03042 0.53 -1.1 3,180,512 + MPMX20_03042 0.54 -0.9 3,180,512 + MPMX20_03042 0.54 +0.7 3,180,512 + MPMX20_03042 0.54 -1.9 3,180,512 + MPMX20_03042 0.54 -1.5 3,180,537 + MPMX20_03042 0.55 -1.8 3,180,564 + MPMX20_03042 0.56 -1.9 3,180,572 - MPMX20_03042 0.56 +0.3 3,180,572 - MPMX20_03042 0.56 -2.5 3,180,664 + MPMX20_03042 0.61 -1.1 3,180,664 + MPMX20_03042 0.61 -0.6 3,180,673 + MPMX20_03042 0.61 -3.3 3,180,744 + MPMX20_03042 0.64 +0.1 3,180,755 + MPMX20_03042 0.65 -1.4 3,180,758 - MPMX20_03042 0.65 -1.1 3,180,798 - MPMX20_03042 0.67 +0.7 3,180,833 + MPMX20_03042 0.68 -2.3 3,180,868 + MPMX20_03042 0.70 -1.6 3,180,868 + MPMX20_03042 0.70 -1.0 3,180,896 - MPMX20_03042 0.71 -1.2 3,180,937 - MPMX20_03042 0.73 -1.8 3,180,938 - MPMX20_03042 0.73 +0.1 3,180,987 - MPMX20_03042 0.76 -2.2 3,181,056 + MPMX20_03042 0.79 -1.3 3,181,056 + MPMX20_03042 0.79 -1.6 3,181,056 + MPMX20_03042 0.79 -1.4 3,181,063 + MPMX20_03042 0.79 -0.5 3,181,064 - MPMX20_03042 0.79 -0.0 3,181,115 + MPMX20_03042 0.81 +0.7 3,181,185 + MPMX20_03042 0.85 -0.2 3,181,191 + MPMX20_03042 0.85 -0.4 3,181,208 + MPMX20_03042 0.86 -2.5 3,181,216 - MPMX20_03042 0.86 -1.2 3,181,216 - MPMX20_03042 0.86 -0.6 3,181,291 + MPMX20_03042 0.90 -0.6 3,181,299 - -0.7 3,181,346 - -1.8 3,181,356 - +0.0 3,181,356 - -0.3 3,181,356 - -1.3 3,181,439 + -2.1 3,181,521 + +1.2 3,181,573 - MPMX20_03043 0.12 -0.8 3,181,575 + MPMX20_03043 0.13 -0.8 3,181,583 - MPMX20_03043 0.15 -0.0 3,181,583 - MPMX20_03043 0.15 -2.3 3,181,694 + MPMX20_03043 0.40 -1.1 3,181,694 + MPMX20_03043 0.40 -1.3 3,181,701 + MPMX20_03043 0.41 -1.0 3,181,853 + MPMX20_03043 0.75 -1.9 3,181,853 + MPMX20_03043 0.75 -0.2 3,181,856 - MPMX20_03043 0.76 -0.4 3,181,861 - MPMX20_03043 0.77 -1.3 3,181,879 + MPMX20_03043 0.81 -0.7 3,181,882 - MPMX20_03043 0.82 -2.1 3,181,907 - MPMX20_03043 0.88 -2.0 3,182,070 + -0.8 3,182,153 + MPMX20_03044 0.16 -0.2 3,182,184 + MPMX20_03044 0.19 -1.8 3,182,184 + MPMX20_03044 0.19 -0.2 3,182,192 - MPMX20_03044 0.20 +1.7 3,182,192 - MPMX20_03044 0.20 -1.2 3,182,192 - MPMX20_03044 0.20 +0.1 3,182,225 + MPMX20_03044 0.23 -0.6 3,182,225 + MPMX20_03044 0.23 -0.8 3,182,233 - MPMX20_03044 0.23 +1.3 3,182,233 - MPMX20_03044 0.23 -1.3 3,182,240 + MPMX20_03044 0.24 +0.4 3,182,240 + MPMX20_03044 0.24 -1.0 3,182,240 + MPMX20_03044 0.24 +1.0 3,182,240 + MPMX20_03044 0.24 -0.6 3,182,248 - MPMX20_03044 0.25 +0.3 3,182,259 + MPMX20_03044 0.26 +0.7 3,182,259 + MPMX20_03044 0.26 -2.5 3,182,259 + MPMX20_03044 0.26 -1.5 3,182,262 - MPMX20_03044 0.26 -1.9 3,182,276 + MPMX20_03044 0.27 +0.0 3,182,279 - MPMX20_03044 0.27 -0.7 3,182,279 - MPMX20_03044 0.27 -0.8 3,182,279 - MPMX20_03044 0.27 -3.1 3,182,279 - MPMX20_03044 0.27 -1.1 3,182,339 + MPMX20_03044 0.33 -3.0 3,182,385 + MPMX20_03044 0.37 -1.1 3,182,394 + MPMX20_03044 0.37 -1.1 3,182,405 + MPMX20_03044 0.38 +0.1 3,182,473 - MPMX20_03044 0.44 -1.5 3,182,473 - MPMX20_03044 0.44 +0.4 3,182,478 - MPMX20_03044 0.45 +1.7
Or see this region's nucleotide sequence