Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03028

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03027 and MPMX20_03028 are separated by 17 nucleotidesMPMX20_03028 and MPMX20_03029 are separated by 1 nucleotides MPMX20_03027: MPMX20_03027 - hypothetical protein, at 3,163,290 to 3,164,570 _03027 MPMX20_03028: MPMX20_03028 - Lipopolysaccharide biosynthesis protein WzxC, at 3,164,588 to 3,166,066 _03028 MPMX20_03029: MPMX20_03029 - UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase, at 3,166,068 to 3,167,462 _03029 Position (kb) 3164 3165 3166 3167Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3163.728 kb on + strand, within MPMX20_03027at 3163.753 kb on - strand, within MPMX20_03027at 3163.761 kb on - strand, within MPMX20_03027at 3163.766 kb on - strand, within MPMX20_03027at 3163.766 kb on - strand, within MPMX20_03027at 3163.768 kb on + strand, within MPMX20_03027at 3163.768 kb on + strand, within MPMX20_03027at 3163.815 kb on + strand, within MPMX20_03027at 3163.835 kb on + strand, within MPMX20_03027at 3163.840 kb on + strand, within MPMX20_03027at 3163.843 kb on - strand, within MPMX20_03027at 3163.848 kb on - strand, within MPMX20_03027at 3163.850 kb on + strand, within MPMX20_03027at 3163.850 kb on + strand, within MPMX20_03027at 3163.850 kb on + strand, within MPMX20_03027at 3163.850 kb on + strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.858 kb on - strand, within MPMX20_03027at 3163.891 kb on - strand, within MPMX20_03027at 3163.893 kb on + strand, within MPMX20_03027at 3163.893 kb on + strand, within MPMX20_03027at 3163.893 kb on + strand, within MPMX20_03027at 3163.893 kb on + strand, within MPMX20_03027at 3163.893 kb on + strand, within MPMX20_03027at 3163.901 kb on - strand, within MPMX20_03027at 3163.901 kb on - strand, within MPMX20_03027at 3163.901 kb on - strand, within MPMX20_03027at 3163.962 kb on + strand, within MPMX20_03027at 3163.970 kb on - strand, within MPMX20_03027at 3164.003 kb on + strand, within MPMX20_03027at 3164.011 kb on - strand, within MPMX20_03027at 3164.011 kb on - strand, within MPMX20_03027at 3164.011 kb on - strand, within MPMX20_03027at 3164.028 kb on + strand, within MPMX20_03027at 3164.036 kb on - strand, within MPMX20_03027at 3164.036 kb on - strand, within MPMX20_03027at 3164.093 kb on + strand, within MPMX20_03027at 3164.101 kb on - strand, within MPMX20_03027at 3164.166 kb on - strand, within MPMX20_03027at 3164.212 kb on - strand, within MPMX20_03027at 3164.250 kb on + strand, within MPMX20_03027at 3164.250 kb on + strand, within MPMX20_03027at 3164.250 kb on + strand, within MPMX20_03027at 3164.250 kb on + strand, within MPMX20_03027at 3164.258 kb on - strand, within MPMX20_03027at 3164.258 kb on - strand, within MPMX20_03027at 3164.258 kb on - strand, within MPMX20_03027at 3164.274 kb on - strand, within MPMX20_03027at 3164.288 kb on + strand, within MPMX20_03027at 3164.309 kb on - strand, within MPMX20_03027at 3164.435 kb on - strand, within MPMX20_03027at 3164.437 kb on - strand, within MPMX20_03027at 3164.444 kb on + strandat 3164.462 kb on - strandat 3164.468 kb on - strandat 3164.476 kb on + strandat 3164.476 kb on + strandat 3164.476 kb on + strandat 3164.476 kb on + strandat 3164.485 kb on + strandat 3164.485 kb on - strandat 3164.493 kb on - strandat 3164.493 kb on - strandat 3164.513 kb on + strandat 3164.521 kb on - strandat 3164.531 kb on - strandat 3164.544 kb on - strandat 3164.654 kb on - strandat 3164.700 kb on - strandat 3164.759 kb on + strand, within MPMX20_03028at 3164.759 kb on + strand, within MPMX20_03028at 3164.759 kb on + strand, within MPMX20_03028at 3164.764 kb on + strand, within MPMX20_03028at 3164.764 kb on + strand, within MPMX20_03028at 3164.764 kb on + strand, within MPMX20_03028at 3164.767 kb on - strand, within MPMX20_03028at 3164.772 kb on - strand, within MPMX20_03028at 3164.772 kb on - strand, within MPMX20_03028at 3164.776 kb on + strand, within MPMX20_03028at 3164.776 kb on + strand, within MPMX20_03028at 3164.784 kb on - strand, within MPMX20_03028at 3164.851 kb on - strand, within MPMX20_03028at 3164.861 kb on - strand, within MPMX20_03028at 3164.883 kb on + strand, within MPMX20_03028at 3164.913 kb on + strand, within MPMX20_03028at 3164.923 kb on + strand, within MPMX20_03028at 3164.928 kb on - strand, within MPMX20_03028at 3164.928 kb on - strand, within MPMX20_03028at 3164.928 kb on - strand, within MPMX20_03028at 3164.984 kb on - strand, within MPMX20_03028at 3165.016 kb on - strand, within MPMX20_03028at 3165.062 kb on - strand, within MPMX20_03028at 3165.067 kb on + strand, within MPMX20_03028at 3165.080 kb on - strand, within MPMX20_03028at 3165.082 kb on + strand, within MPMX20_03028at 3165.094 kb on + strand, within MPMX20_03028at 3165.094 kb on + strand, within MPMX20_03028at 3165.094 kb on + strand, within MPMX20_03028at 3165.102 kb on - strand, within MPMX20_03028at 3165.102 kb on - strand, within MPMX20_03028at 3165.102 kb on - strand, within MPMX20_03028at 3165.102 kb on - strand, within MPMX20_03028at 3165.102 kb on - strand, within MPMX20_03028at 3165.104 kb on + strand, within MPMX20_03028at 3165.110 kb on - strand, within MPMX20_03028at 3165.185 kb on + strand, within MPMX20_03028at 3165.192 kb on + strand, within MPMX20_03028at 3165.193 kb on - strand, within MPMX20_03028at 3165.195 kb on + strand, within MPMX20_03028at 3165.200 kb on - strand, within MPMX20_03028at 3165.290 kb on - strand, within MPMX20_03028at 3165.326 kb on + strand, within MPMX20_03028at 3165.329 kb on + strand, within MPMX20_03028at 3165.347 kb on + strand, within MPMX20_03028at 3165.357 kb on - strand, within MPMX20_03028at 3165.372 kb on + strand, within MPMX20_03028at 3165.382 kb on + strand, within MPMX20_03028at 3165.410 kb on + strand, within MPMX20_03028at 3165.472 kb on + strand, within MPMX20_03028at 3165.517 kb on - strand, within MPMX20_03028at 3165.523 kb on + strand, within MPMX20_03028at 3165.523 kb on + strand, within MPMX20_03028at 3165.542 kb on + strand, within MPMX20_03028at 3165.586 kb on + strand, within MPMX20_03028at 3165.596 kb on + strand, within MPMX20_03028at 3165.604 kb on - strand, within MPMX20_03028at 3165.628 kb on - strand, within MPMX20_03028at 3165.628 kb on - strand, within MPMX20_03028at 3165.629 kb on - strand, within MPMX20_03028at 3165.674 kb on + strand, within MPMX20_03028at 3165.676 kb on + strand, within MPMX20_03028at 3165.684 kb on - strand, within MPMX20_03028at 3165.722 kb on + strand, within MPMX20_03028at 3165.730 kb on - strand, within MPMX20_03028at 3165.741 kb on + strand, within MPMX20_03028at 3165.744 kb on - strand, within MPMX20_03028at 3165.836 kb on - strand, within MPMX20_03028at 3165.846 kb on - strand, within MPMX20_03028at 3165.856 kb on - strand, within MPMX20_03028at 3165.999 kb on - strandat 3166.038 kb on + strandat 3166.093 kb on + strandat 3166.093 kb on + strandat 3166.093 kb on + strandat 3166.129 kb on + strandat 3166.253 kb on + strand, within MPMX20_03029at 3166.266 kb on + strand, within MPMX20_03029at 3166.290 kb on + strand, within MPMX20_03029at 3166.293 kb on - strand, within MPMX20_03029at 3166.331 kb on - strand, within MPMX20_03029at 3166.338 kb on - strand, within MPMX20_03029at 3166.410 kb on - strand, within MPMX20_03029at 3166.443 kb on + strand, within MPMX20_03029at 3166.451 kb on - strand, within MPMX20_03029at 3166.544 kb on + strand, within MPMX20_03029at 3166.571 kb on + strand, within MPMX20_03029at 3166.571 kb on + strand, within MPMX20_03029at 3166.571 kb on + strand, within MPMX20_03029at 3166.581 kb on + strand, within MPMX20_03029at 3166.581 kb on + strand, within MPMX20_03029at 3166.589 kb on - strand, within MPMX20_03029at 3166.599 kb on - strand, within MPMX20_03029at 3166.672 kb on + strand, within MPMX20_03029at 3166.672 kb on + strand, within MPMX20_03029at 3166.672 kb on + strand, within MPMX20_03029at 3166.672 kb on + strand, within MPMX20_03029at 3166.672 kb on + strand, within MPMX20_03029at 3166.680 kb on - strand, within MPMX20_03029at 3166.680 kb on - strand, within MPMX20_03029at 3166.778 kb on - strand, within MPMX20_03029at 3166.792 kb on - strand, within MPMX20_03029at 3166.899 kb on + strand, within MPMX20_03029at 3166.907 kb on - strand, within MPMX20_03029at 3166.907 kb on - strand, within MPMX20_03029at 3166.907 kb on - strand, within MPMX20_03029at 3166.920 kb on - strand, within MPMX20_03029at 3166.920 kb on - strand, within MPMX20_03029at 3166.946 kb on + strand, within MPMX20_03029at 3166.946 kb on + strand, within MPMX20_03029at 3166.989 kb on + strand, within MPMX20_03029at 3167.033 kb on + strand, within MPMX20_03029

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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3,163,728 + MPMX20_03027 0.34 -0.8
3,163,753 - MPMX20_03027 0.36 -0.7
3,163,761 - MPMX20_03027 0.37 +0.4
3,163,766 - MPMX20_03027 0.37 +0.5
3,163,766 - MPMX20_03027 0.37 -0.4
3,163,768 + MPMX20_03027 0.37 +0.9
3,163,768 + MPMX20_03027 0.37 -2.3
3,163,815 + MPMX20_03027 0.41 -0.2
3,163,835 + MPMX20_03027 0.43 -3.2
3,163,840 + MPMX20_03027 0.43 -0.5
3,163,843 - MPMX20_03027 0.43 -1.1
3,163,848 - MPMX20_03027 0.44 -3.0
3,163,850 + MPMX20_03027 0.44 -1.9
3,163,850 + MPMX20_03027 0.44 +1.7
3,163,850 + MPMX20_03027 0.44 +0.4
3,163,850 + MPMX20_03027 0.44 -1.0
3,163,858 - MPMX20_03027 0.44 +1.7
3,163,858 - MPMX20_03027 0.44 -1.4
3,163,858 - MPMX20_03027 0.44 +0.2
3,163,858 - MPMX20_03027 0.44 -1.9
3,163,858 - MPMX20_03027 0.44 +1.6
3,163,858 - MPMX20_03027 0.44 +0.2
3,163,891 - MPMX20_03027 0.47 -1.5
3,163,893 + MPMX20_03027 0.47 +1.1
3,163,893 + MPMX20_03027 0.47 +0.7
3,163,893 + MPMX20_03027 0.47 -0.8
3,163,893 + MPMX20_03027 0.47 -1.1
3,163,893 + MPMX20_03027 0.47 -2.8
3,163,901 - MPMX20_03027 0.48 -0.6
3,163,901 - MPMX20_03027 0.48 -1.3
3,163,901 - MPMX20_03027 0.48 +0.7
3,163,962 + MPMX20_03027 0.52 -0.1
3,163,970 - MPMX20_03027 0.53 -0.2
3,164,003 + MPMX20_03027 0.56 -0.9
3,164,011 - MPMX20_03027 0.56 -1.5
3,164,011 - MPMX20_03027 0.56 -1.1
3,164,011 - MPMX20_03027 0.56 -2.3
3,164,028 + MPMX20_03027 0.58 -0.4
3,164,036 - MPMX20_03027 0.58 +0.2
3,164,036 - MPMX20_03027 0.58 -2.2
3,164,093 + MPMX20_03027 0.63 -0.0
3,164,101 - MPMX20_03027 0.63 -1.2
3,164,166 - MPMX20_03027 0.68 +1.4
3,164,212 - MPMX20_03027 0.72 +0.9
3,164,250 + MPMX20_03027 0.75 -0.1
3,164,250 + MPMX20_03027 0.75 -0.4
3,164,250 + MPMX20_03027 0.75 -0.3
3,164,250 + MPMX20_03027 0.75 -0.9
3,164,258 - MPMX20_03027 0.76 -3.0
3,164,258 - MPMX20_03027 0.76 +0.7
3,164,258 - MPMX20_03027 0.76 -0.3
3,164,274 - MPMX20_03027 0.77 +0.1
3,164,288 + MPMX20_03027 0.78 -0.2
3,164,309 - MPMX20_03027 0.80 -1.0
3,164,435 - MPMX20_03027 0.89 -0.3
3,164,437 - MPMX20_03027 0.90 -1.9
3,164,444 + -0.1
3,164,462 - -2.5
3,164,468 - -0.4
3,164,476 + -2.0
3,164,476 + -2.5
3,164,476 + -0.1
3,164,476 + -1.5
3,164,485 + +1.1
3,164,485 - +1.9
3,164,493 - -1.2
3,164,493 - -0.3
3,164,513 + -0.8
3,164,521 - -0.9
3,164,531 - -2.5
3,164,544 - -2.0
3,164,654 - +0.7
3,164,700 - -2.2
3,164,759 + MPMX20_03028 0.12 -0.6
3,164,759 + MPMX20_03028 0.12 -1.1
3,164,759 + MPMX20_03028 0.12 -0.6
3,164,764 + MPMX20_03028 0.12 -2.2
3,164,764 + MPMX20_03028 0.12 -2.2
3,164,764 + MPMX20_03028 0.12 -1.9
3,164,767 - MPMX20_03028 0.12 -0.2
3,164,772 - MPMX20_03028 0.12 -0.9
3,164,772 - MPMX20_03028 0.12 -1.2
3,164,776 + MPMX20_03028 0.13 -1.1
3,164,776 + MPMX20_03028 0.13 +0.7
3,164,784 - MPMX20_03028 0.13 -1.8
3,164,851 - MPMX20_03028 0.18 +1.4
3,164,861 - MPMX20_03028 0.18 -1.4
3,164,883 + MPMX20_03028 0.20 -1.2
3,164,913 + MPMX20_03028 0.22 -1.3
3,164,923 + MPMX20_03028 0.23 -0.4
3,164,928 - MPMX20_03028 0.23 -0.6
3,164,928 - MPMX20_03028 0.23 +0.5
3,164,928 - MPMX20_03028 0.23 +0.9
3,164,984 - MPMX20_03028 0.27 -1.3
3,165,016 - MPMX20_03028 0.29 -1.0
3,165,062 - MPMX20_03028 0.32 -2.2
3,165,067 + MPMX20_03028 0.32 -1.6
3,165,080 - MPMX20_03028 0.33 -1.8
3,165,082 + MPMX20_03028 0.33 -2.3
3,165,094 + MPMX20_03028 0.34 +0.7
3,165,094 + MPMX20_03028 0.34 -2.1
3,165,094 + MPMX20_03028 0.34 -1.9
3,165,102 - MPMX20_03028 0.35 -1.5
3,165,102 - MPMX20_03028 0.35 +0.4
3,165,102 - MPMX20_03028 0.35 -0.9
3,165,102 - MPMX20_03028 0.35 -2.5
3,165,102 - MPMX20_03028 0.35 -1.5
3,165,104 + MPMX20_03028 0.35 -0.3
3,165,110 - MPMX20_03028 0.35 +1.7
3,165,185 + MPMX20_03028 0.40 -0.5
3,165,192 + MPMX20_03028 0.41 +0.4
3,165,193 - MPMX20_03028 0.41 -0.6
3,165,195 + MPMX20_03028 0.41 -0.5
3,165,200 - MPMX20_03028 0.41 -1.8
3,165,290 - MPMX20_03028 0.47 -1.3
3,165,326 + MPMX20_03028 0.50 -2.1
3,165,329 + MPMX20_03028 0.50 -3.0
3,165,347 + MPMX20_03028 0.51 -2.2
3,165,357 - MPMX20_03028 0.52 -2.8
3,165,372 + MPMX20_03028 0.53 -0.8
3,165,382 + MPMX20_03028 0.54 -0.4
3,165,410 + MPMX20_03028 0.56 -2.4
3,165,472 + MPMX20_03028 0.60 -2.1
3,165,517 - MPMX20_03028 0.63 -1.9
3,165,523 + MPMX20_03028 0.63 -1.1
3,165,523 + MPMX20_03028 0.63 +1.4
3,165,542 + MPMX20_03028 0.65 -2.9
3,165,586 + MPMX20_03028 0.67 -1.1
3,165,596 + MPMX20_03028 0.68 -3.0
3,165,604 - MPMX20_03028 0.69 -1.0
3,165,628 - MPMX20_03028 0.70 -3.5
3,165,628 - MPMX20_03028 0.70 -0.6
3,165,629 - MPMX20_03028 0.70 -1.4
3,165,674 + MPMX20_03028 0.73 -0.9
3,165,676 + MPMX20_03028 0.74 -2.2
3,165,684 - MPMX20_03028 0.74 -2.4
3,165,722 + MPMX20_03028 0.77 -0.4
3,165,730 - MPMX20_03028 0.77 -2.8
3,165,741 + MPMX20_03028 0.78 -0.9
3,165,744 - MPMX20_03028 0.78 -1.2
3,165,836 - MPMX20_03028 0.84 -2.1
3,165,846 - MPMX20_03028 0.85 -0.2
3,165,856 - MPMX20_03028 0.86 -2.0
3,165,999 - -1.3
3,166,038 + -2.1
3,166,093 + +0.4
3,166,093 + +0.2
3,166,093 + +1.0
3,166,129 + -0.8
3,166,253 + MPMX20_03029 0.13 -0.4
3,166,266 + MPMX20_03029 0.14 -0.5
3,166,290 + MPMX20_03029 0.16 +0.3
3,166,293 - MPMX20_03029 0.16 -0.9
3,166,331 - MPMX20_03029 0.19 -0.9
3,166,338 - MPMX20_03029 0.19 -0.6
3,166,410 - MPMX20_03029 0.25 +1.7
3,166,443 + MPMX20_03029 0.27 +0.1
3,166,451 - MPMX20_03029 0.27 -0.3
3,166,544 + MPMX20_03029 0.34 +0.5
3,166,571 + MPMX20_03029 0.36 +1.1
3,166,571 + MPMX20_03029 0.36 -0.5
3,166,571 + MPMX20_03029 0.36 +0.7
3,166,581 + MPMX20_03029 0.37 +0.6
3,166,581 + MPMX20_03029 0.37 +1.0
3,166,589 - MPMX20_03029 0.37 +0.1
3,166,599 - MPMX20_03029 0.38 -0.2
3,166,672 + MPMX20_03029 0.43 +0.9
3,166,672 + MPMX20_03029 0.43 -1.0
3,166,672 + MPMX20_03029 0.43 +0.6
3,166,672 + MPMX20_03029 0.43 -2.0
3,166,672 + MPMX20_03029 0.43 -0.2
3,166,680 - MPMX20_03029 0.44 +0.9
3,166,680 - MPMX20_03029 0.44 +1.2
3,166,778 - MPMX20_03029 0.51 -0.3
3,166,792 - MPMX20_03029 0.52 -0.3
3,166,899 + MPMX20_03029 0.60 -0.9
3,166,907 - MPMX20_03029 0.60 -1.5
3,166,907 - MPMX20_03029 0.60 -1.0
3,166,907 - MPMX20_03029 0.60 -0.1
3,166,920 - MPMX20_03029 0.61 +1.0
3,166,920 - MPMX20_03029 0.61 -0.6
3,166,946 + MPMX20_03029 0.63 +0.5
3,166,946 + MPMX20_03029 0.63 +0.9
3,166,989 + MPMX20_03029 0.66 +0.2
3,167,033 + MPMX20_03029 0.69 +0.1

Or see this region's nucleotide sequence