Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03027 and MPMX20_03028 are separated by 17 nucleotides MPMX20_03028 and MPMX20_03029 are separated by 1 nucleotides
MPMX20_03027: MPMX20_03027 - hypothetical protein, at 3,163,290 to 3,164,570
_03027
MPMX20_03028: MPMX20_03028 - Lipopolysaccharide biosynthesis protein WzxC, at 3,164,588 to 3,166,066
_03028
MPMX20_03029: MPMX20_03029 - UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase, at 3,166,068 to 3,167,462
_03029
Position (kb)
3164
3165
3166
3167 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3163.728 kb on + strand, within MPMX20_03027 at 3163.753 kb on - strand, within MPMX20_03027 at 3163.761 kb on - strand, within MPMX20_03027 at 3163.766 kb on - strand, within MPMX20_03027 at 3163.766 kb on - strand, within MPMX20_03027 at 3163.768 kb on + strand, within MPMX20_03027 at 3163.768 kb on + strand, within MPMX20_03027 at 3163.815 kb on + strand, within MPMX20_03027 at 3163.835 kb on + strand, within MPMX20_03027 at 3163.840 kb on + strand, within MPMX20_03027 at 3163.843 kb on - strand, within MPMX20_03027 at 3163.848 kb on - strand, within MPMX20_03027 at 3163.850 kb on + strand, within MPMX20_03027 at 3163.850 kb on + strand, within MPMX20_03027 at 3163.850 kb on + strand, within MPMX20_03027 at 3163.850 kb on + strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.858 kb on - strand, within MPMX20_03027 at 3163.891 kb on - strand, within MPMX20_03027 at 3163.893 kb on + strand, within MPMX20_03027 at 3163.893 kb on + strand, within MPMX20_03027 at 3163.893 kb on + strand, within MPMX20_03027 at 3163.893 kb on + strand, within MPMX20_03027 at 3163.893 kb on + strand, within MPMX20_03027 at 3163.901 kb on - strand, within MPMX20_03027 at 3163.901 kb on - strand, within MPMX20_03027 at 3163.901 kb on - strand, within MPMX20_03027 at 3163.962 kb on + strand, within MPMX20_03027 at 3163.970 kb on - strand, within MPMX20_03027 at 3164.003 kb on + strand, within MPMX20_03027 at 3164.011 kb on - strand, within MPMX20_03027 at 3164.011 kb on - strand, within MPMX20_03027 at 3164.011 kb on - strand, within MPMX20_03027 at 3164.028 kb on + strand, within MPMX20_03027 at 3164.036 kb on - strand, within MPMX20_03027 at 3164.036 kb on - strand, within MPMX20_03027 at 3164.093 kb on + strand, within MPMX20_03027 at 3164.101 kb on - strand, within MPMX20_03027 at 3164.166 kb on - strand, within MPMX20_03027 at 3164.212 kb on - strand, within MPMX20_03027 at 3164.250 kb on + strand, within MPMX20_03027 at 3164.250 kb on + strand, within MPMX20_03027 at 3164.250 kb on + strand, within MPMX20_03027 at 3164.250 kb on + strand, within MPMX20_03027 at 3164.258 kb on - strand, within MPMX20_03027 at 3164.258 kb on - strand, within MPMX20_03027 at 3164.258 kb on - strand, within MPMX20_03027 at 3164.274 kb on - strand, within MPMX20_03027 at 3164.288 kb on + strand, within MPMX20_03027 at 3164.309 kb on - strand, within MPMX20_03027 at 3164.435 kb on - strand, within MPMX20_03027 at 3164.437 kb on - strand, within MPMX20_03027 at 3164.444 kb on + strand at 3164.462 kb on - strand at 3164.468 kb on - strand at 3164.476 kb on + strand at 3164.476 kb on + strand at 3164.476 kb on + strand at 3164.476 kb on + strand at 3164.485 kb on + strand at 3164.485 kb on - strand at 3164.493 kb on - strand at 3164.493 kb on - strand at 3164.513 kb on + strand at 3164.521 kb on - strand at 3164.531 kb on - strand at 3164.544 kb on - strand at 3164.654 kb on - strand at 3164.700 kb on - strand at 3164.759 kb on + strand, within MPMX20_03028 at 3164.759 kb on + strand, within MPMX20_03028 at 3164.759 kb on + strand, within MPMX20_03028 at 3164.764 kb on + strand, within MPMX20_03028 at 3164.764 kb on + strand, within MPMX20_03028 at 3164.764 kb on + strand, within MPMX20_03028 at 3164.767 kb on - strand, within MPMX20_03028 at 3164.772 kb on - strand, within MPMX20_03028 at 3164.772 kb on - strand, within MPMX20_03028 at 3164.776 kb on + strand, within MPMX20_03028 at 3164.776 kb on + strand, within MPMX20_03028 at 3164.784 kb on - strand, within MPMX20_03028 at 3164.851 kb on - strand, within MPMX20_03028 at 3164.861 kb on - strand, within MPMX20_03028 at 3164.883 kb on + strand, within MPMX20_03028 at 3164.913 kb on + strand, within MPMX20_03028 at 3164.923 kb on + strand, within MPMX20_03028 at 3164.928 kb on - strand, within MPMX20_03028 at 3164.928 kb on - strand, within MPMX20_03028 at 3164.928 kb on - strand, within MPMX20_03028 at 3164.984 kb on - strand, within MPMX20_03028 at 3165.016 kb on - strand, within MPMX20_03028 at 3165.062 kb on - strand, within MPMX20_03028 at 3165.067 kb on + strand, within MPMX20_03028 at 3165.080 kb on - strand, within MPMX20_03028 at 3165.082 kb on + strand, within MPMX20_03028 at 3165.094 kb on + strand, within MPMX20_03028 at 3165.094 kb on + strand, within MPMX20_03028 at 3165.094 kb on + strand, within MPMX20_03028 at 3165.102 kb on - strand, within MPMX20_03028 at 3165.102 kb on - strand, within MPMX20_03028 at 3165.102 kb on - strand, within MPMX20_03028 at 3165.102 kb on - strand, within MPMX20_03028 at 3165.102 kb on - strand, within MPMX20_03028 at 3165.104 kb on + strand, within MPMX20_03028 at 3165.110 kb on - strand, within MPMX20_03028 at 3165.185 kb on + strand, within MPMX20_03028 at 3165.192 kb on + strand, within MPMX20_03028 at 3165.193 kb on - strand, within MPMX20_03028 at 3165.195 kb on + strand, within MPMX20_03028 at 3165.200 kb on - strand, within MPMX20_03028 at 3165.290 kb on - strand, within MPMX20_03028 at 3165.326 kb on + strand, within MPMX20_03028 at 3165.329 kb on + strand, within MPMX20_03028 at 3165.347 kb on + strand, within MPMX20_03028 at 3165.357 kb on - strand, within MPMX20_03028 at 3165.372 kb on + strand, within MPMX20_03028 at 3165.382 kb on + strand, within MPMX20_03028 at 3165.410 kb on + strand, within MPMX20_03028 at 3165.472 kb on + strand, within MPMX20_03028 at 3165.517 kb on - strand, within MPMX20_03028 at 3165.523 kb on + strand, within MPMX20_03028 at 3165.523 kb on + strand, within MPMX20_03028 at 3165.542 kb on + strand, within MPMX20_03028 at 3165.586 kb on + strand, within MPMX20_03028 at 3165.596 kb on + strand, within MPMX20_03028 at 3165.604 kb on - strand, within MPMX20_03028 at 3165.628 kb on - strand, within MPMX20_03028 at 3165.628 kb on - strand, within MPMX20_03028 at 3165.629 kb on - strand, within MPMX20_03028 at 3165.674 kb on + strand, within MPMX20_03028 at 3165.676 kb on + strand, within MPMX20_03028 at 3165.684 kb on - strand, within MPMX20_03028 at 3165.722 kb on + strand, within MPMX20_03028 at 3165.730 kb on - strand, within MPMX20_03028 at 3165.741 kb on + strand, within MPMX20_03028 at 3165.744 kb on - strand, within MPMX20_03028 at 3165.836 kb on - strand, within MPMX20_03028 at 3165.846 kb on - strand, within MPMX20_03028 at 3165.856 kb on - strand, within MPMX20_03028 at 3165.999 kb on - strand at 3166.038 kb on + strand at 3166.093 kb on + strand at 3166.093 kb on + strand at 3166.093 kb on + strand at 3166.129 kb on + strand at 3166.253 kb on + strand, within MPMX20_03029 at 3166.266 kb on + strand, within MPMX20_03029 at 3166.290 kb on + strand, within MPMX20_03029 at 3166.293 kb on - strand, within MPMX20_03029 at 3166.331 kb on - strand, within MPMX20_03029 at 3166.338 kb on - strand, within MPMX20_03029 at 3166.410 kb on - strand, within MPMX20_03029 at 3166.443 kb on + strand, within MPMX20_03029 at 3166.451 kb on - strand, within MPMX20_03029 at 3166.544 kb on + strand, within MPMX20_03029 at 3166.571 kb on + strand, within MPMX20_03029 at 3166.571 kb on + strand, within MPMX20_03029 at 3166.571 kb on + strand, within MPMX20_03029 at 3166.581 kb on + strand, within MPMX20_03029 at 3166.581 kb on + strand, within MPMX20_03029 at 3166.589 kb on - strand, within MPMX20_03029 at 3166.599 kb on - strand, within MPMX20_03029 at 3166.672 kb on + strand, within MPMX20_03029 at 3166.672 kb on + strand, within MPMX20_03029 at 3166.672 kb on + strand, within MPMX20_03029 at 3166.672 kb on + strand, within MPMX20_03029 at 3166.672 kb on + strand, within MPMX20_03029 at 3166.680 kb on - strand, within MPMX20_03029 at 3166.680 kb on - strand, within MPMX20_03029 at 3166.778 kb on - strand, within MPMX20_03029 at 3166.792 kb on - strand, within MPMX20_03029 at 3166.899 kb on + strand, within MPMX20_03029 at 3166.907 kb on - strand, within MPMX20_03029 at 3166.907 kb on - strand, within MPMX20_03029 at 3166.907 kb on - strand, within MPMX20_03029 at 3166.920 kb on - strand, within MPMX20_03029 at 3166.920 kb on - strand, within MPMX20_03029 at 3166.946 kb on + strand, within MPMX20_03029 at 3166.946 kb on + strand, within MPMX20_03029 at 3166.989 kb on + strand, within MPMX20_03029 at 3167.033 kb on + strand, within MPMX20_03029
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 3,163,728 + MPMX20_03027 0.34 -0.8 3,163,753 - MPMX20_03027 0.36 -0.7 3,163,761 - MPMX20_03027 0.37 +0.4 3,163,766 - MPMX20_03027 0.37 +0.5 3,163,766 - MPMX20_03027 0.37 -0.4 3,163,768 + MPMX20_03027 0.37 +0.9 3,163,768 + MPMX20_03027 0.37 -2.3 3,163,815 + MPMX20_03027 0.41 -0.2 3,163,835 + MPMX20_03027 0.43 -3.2 3,163,840 + MPMX20_03027 0.43 -0.5 3,163,843 - MPMX20_03027 0.43 -1.1 3,163,848 - MPMX20_03027 0.44 -3.0 3,163,850 + MPMX20_03027 0.44 -1.9 3,163,850 + MPMX20_03027 0.44 +1.7 3,163,850 + MPMX20_03027 0.44 +0.4 3,163,850 + MPMX20_03027 0.44 -1.0 3,163,858 - MPMX20_03027 0.44 +1.7 3,163,858 - MPMX20_03027 0.44 -1.4 3,163,858 - MPMX20_03027 0.44 +0.2 3,163,858 - MPMX20_03027 0.44 -1.9 3,163,858 - MPMX20_03027 0.44 +1.6 3,163,858 - MPMX20_03027 0.44 +0.2 3,163,891 - MPMX20_03027 0.47 -1.5 3,163,893 + MPMX20_03027 0.47 +1.1 3,163,893 + MPMX20_03027 0.47 +0.7 3,163,893 + MPMX20_03027 0.47 -0.8 3,163,893 + MPMX20_03027 0.47 -1.1 3,163,893 + MPMX20_03027 0.47 -2.8 3,163,901 - MPMX20_03027 0.48 -0.6 3,163,901 - MPMX20_03027 0.48 -1.3 3,163,901 - MPMX20_03027 0.48 +0.7 3,163,962 + MPMX20_03027 0.52 -0.1 3,163,970 - MPMX20_03027 0.53 -0.2 3,164,003 + MPMX20_03027 0.56 -0.9 3,164,011 - MPMX20_03027 0.56 -1.5 3,164,011 - MPMX20_03027 0.56 -1.1 3,164,011 - MPMX20_03027 0.56 -2.3 3,164,028 + MPMX20_03027 0.58 -0.4 3,164,036 - MPMX20_03027 0.58 +0.2 3,164,036 - MPMX20_03027 0.58 -2.2 3,164,093 + MPMX20_03027 0.63 -0.0 3,164,101 - MPMX20_03027 0.63 -1.2 3,164,166 - MPMX20_03027 0.68 +1.4 3,164,212 - MPMX20_03027 0.72 +0.9 3,164,250 + MPMX20_03027 0.75 -0.1 3,164,250 + MPMX20_03027 0.75 -0.4 3,164,250 + MPMX20_03027 0.75 -0.3 3,164,250 + MPMX20_03027 0.75 -0.9 3,164,258 - MPMX20_03027 0.76 -3.0 3,164,258 - MPMX20_03027 0.76 +0.7 3,164,258 - MPMX20_03027 0.76 -0.3 3,164,274 - MPMX20_03027 0.77 +0.1 3,164,288 + MPMX20_03027 0.78 -0.2 3,164,309 - MPMX20_03027 0.80 -1.0 3,164,435 - MPMX20_03027 0.89 -0.3 3,164,437 - MPMX20_03027 0.90 -1.9 3,164,444 + -0.1 3,164,462 - -2.5 3,164,468 - -0.4 3,164,476 + -2.0 3,164,476 + -2.5 3,164,476 + -0.1 3,164,476 + -1.5 3,164,485 + +1.1 3,164,485 - +1.9 3,164,493 - -1.2 3,164,493 - -0.3 3,164,513 + -0.8 3,164,521 - -0.9 3,164,531 - -2.5 3,164,544 - -2.0 3,164,654 - +0.7 3,164,700 - -2.2 3,164,759 + MPMX20_03028 0.12 -0.6 3,164,759 + MPMX20_03028 0.12 -1.1 3,164,759 + MPMX20_03028 0.12 -0.6 3,164,764 + MPMX20_03028 0.12 -2.2 3,164,764 + MPMX20_03028 0.12 -2.2 3,164,764 + MPMX20_03028 0.12 -1.9 3,164,767 - MPMX20_03028 0.12 -0.2 3,164,772 - MPMX20_03028 0.12 -0.9 3,164,772 - MPMX20_03028 0.12 -1.2 3,164,776 + MPMX20_03028 0.13 -1.1 3,164,776 + MPMX20_03028 0.13 +0.7 3,164,784 - MPMX20_03028 0.13 -1.8 3,164,851 - MPMX20_03028 0.18 +1.4 3,164,861 - MPMX20_03028 0.18 -1.4 3,164,883 + MPMX20_03028 0.20 -1.2 3,164,913 + MPMX20_03028 0.22 -1.3 3,164,923 + MPMX20_03028 0.23 -0.4 3,164,928 - MPMX20_03028 0.23 -0.6 3,164,928 - MPMX20_03028 0.23 +0.5 3,164,928 - MPMX20_03028 0.23 +0.9 3,164,984 - MPMX20_03028 0.27 -1.3 3,165,016 - MPMX20_03028 0.29 -1.0 3,165,062 - MPMX20_03028 0.32 -2.2 3,165,067 + MPMX20_03028 0.32 -1.6 3,165,080 - MPMX20_03028 0.33 -1.8 3,165,082 + MPMX20_03028 0.33 -2.3 3,165,094 + MPMX20_03028 0.34 +0.7 3,165,094 + MPMX20_03028 0.34 -2.1 3,165,094 + MPMX20_03028 0.34 -1.9 3,165,102 - MPMX20_03028 0.35 -1.5 3,165,102 - MPMX20_03028 0.35 +0.4 3,165,102 - MPMX20_03028 0.35 -0.9 3,165,102 - MPMX20_03028 0.35 -2.5 3,165,102 - MPMX20_03028 0.35 -1.5 3,165,104 + MPMX20_03028 0.35 -0.3 3,165,110 - MPMX20_03028 0.35 +1.7 3,165,185 + MPMX20_03028 0.40 -0.5 3,165,192 + MPMX20_03028 0.41 +0.4 3,165,193 - MPMX20_03028 0.41 -0.6 3,165,195 + MPMX20_03028 0.41 -0.5 3,165,200 - MPMX20_03028 0.41 -1.8 3,165,290 - MPMX20_03028 0.47 -1.3 3,165,326 + MPMX20_03028 0.50 -2.1 3,165,329 + MPMX20_03028 0.50 -3.0 3,165,347 + MPMX20_03028 0.51 -2.2 3,165,357 - MPMX20_03028 0.52 -2.8 3,165,372 + MPMX20_03028 0.53 -0.8 3,165,382 + MPMX20_03028 0.54 -0.4 3,165,410 + MPMX20_03028 0.56 -2.4 3,165,472 + MPMX20_03028 0.60 -2.1 3,165,517 - MPMX20_03028 0.63 -1.9 3,165,523 + MPMX20_03028 0.63 -1.1 3,165,523 + MPMX20_03028 0.63 +1.4 3,165,542 + MPMX20_03028 0.65 -2.9 3,165,586 + MPMX20_03028 0.67 -1.1 3,165,596 + MPMX20_03028 0.68 -3.0 3,165,604 - MPMX20_03028 0.69 -1.0 3,165,628 - MPMX20_03028 0.70 -3.5 3,165,628 - MPMX20_03028 0.70 -0.6 3,165,629 - MPMX20_03028 0.70 -1.4 3,165,674 + MPMX20_03028 0.73 -0.9 3,165,676 + MPMX20_03028 0.74 -2.2 3,165,684 - MPMX20_03028 0.74 -2.4 3,165,722 + MPMX20_03028 0.77 -0.4 3,165,730 - MPMX20_03028 0.77 -2.8 3,165,741 + MPMX20_03028 0.78 -0.9 3,165,744 - MPMX20_03028 0.78 -1.2 3,165,836 - MPMX20_03028 0.84 -2.1 3,165,846 - MPMX20_03028 0.85 -0.2 3,165,856 - MPMX20_03028 0.86 -2.0 3,165,999 - -1.3 3,166,038 + -2.1 3,166,093 + +0.4 3,166,093 + +0.2 3,166,093 + +1.0 3,166,129 + -0.8 3,166,253 + MPMX20_03029 0.13 -0.4 3,166,266 + MPMX20_03029 0.14 -0.5 3,166,290 + MPMX20_03029 0.16 +0.3 3,166,293 - MPMX20_03029 0.16 -0.9 3,166,331 - MPMX20_03029 0.19 -0.9 3,166,338 - MPMX20_03029 0.19 -0.6 3,166,410 - MPMX20_03029 0.25 +1.7 3,166,443 + MPMX20_03029 0.27 +0.1 3,166,451 - MPMX20_03029 0.27 -0.3 3,166,544 + MPMX20_03029 0.34 +0.5 3,166,571 + MPMX20_03029 0.36 +1.1 3,166,571 + MPMX20_03029 0.36 -0.5 3,166,571 + MPMX20_03029 0.36 +0.7 3,166,581 + MPMX20_03029 0.37 +0.6 3,166,581 + MPMX20_03029 0.37 +1.0 3,166,589 - MPMX20_03029 0.37 +0.1 3,166,599 - MPMX20_03029 0.38 -0.2 3,166,672 + MPMX20_03029 0.43 +0.9 3,166,672 + MPMX20_03029 0.43 -1.0 3,166,672 + MPMX20_03029 0.43 +0.6 3,166,672 + MPMX20_03029 0.43 -2.0 3,166,672 + MPMX20_03029 0.43 -0.2 3,166,680 - MPMX20_03029 0.44 +0.9 3,166,680 - MPMX20_03029 0.44 +1.2 3,166,778 - MPMX20_03029 0.51 -0.3 3,166,792 - MPMX20_03029 0.52 -0.3 3,166,899 + MPMX20_03029 0.60 -0.9 3,166,907 - MPMX20_03029 0.60 -1.5 3,166,907 - MPMX20_03029 0.60 -1.0 3,166,907 - MPMX20_03029 0.60 -0.1 3,166,920 - MPMX20_03029 0.61 +1.0 3,166,920 - MPMX20_03029 0.61 -0.6 3,166,946 + MPMX20_03029 0.63 +0.5 3,166,946 + MPMX20_03029 0.63 +0.9 3,166,989 + MPMX20_03029 0.66 +0.2 3,167,033 + MPMX20_03029 0.69 +0.1
Or see this region's nucleotide sequence