Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01970 and MPMX20_01971 are separated by 118 nucleotides MPMX20_01971 and MPMX20_01972 are separated by 4 nucleotides MPMX20_01972 and MPMX20_01973 are separated by 153 nucleotides MPMX20_01973 and MPMX20_01974 are separated by 237 nucleotides MPMX20_01974 and MPMX20_01975 are separated by 28 nucleotides
MPMX20_01970: MPMX20_01970 - hypothetical protein, at 2,061,927 to 2,063,522
_01970
MPMX20_01971: MPMX20_01971 - tRNA-Val, at 2,063,641 to 2,063,717
_01971
MPMX20_01972: MPMX20_01972 - tRNA-Val, at 2,063,722 to 2,063,798
_01972
MPMX20_01973: MPMX20_01973 - Multidrug resistance protein MdtK, at 2,063,952 to 2,065,313
_01973
MPMX20_01974: MPMX20_01974 - Riboflavin synthase, at 2,065,551 to 2,066,192
_01974
MPMX20_01975: MPMX20_01975 - Cyclopropane-fatty-acyl-phospholipid synthase, at 2,066,221 to 2,067,369
_01975
Position (kb)
2063
2064
2065
2066 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.976 kb on - strand, within MPMX20_01970 at 2062.981 kb on - strand, within MPMX20_01970 at 2063.023 kb on + strand, within MPMX20_01970 at 2063.028 kb on + strand, within MPMX20_01970 at 2063.028 kb on + strand, within MPMX20_01970 at 2063.046 kb on - strand, within MPMX20_01970 at 2063.174 kb on - strand, within MPMX20_01970 at 2063.174 kb on - strand, within MPMX20_01970 at 2063.274 kb on - strand, within MPMX20_01970 at 2063.300 kb on + strand, within MPMX20_01970 at 2063.308 kb on - strand, within MPMX20_01970 at 2063.409 kb on + strand at 2063.500 kb on - strand at 2063.500 kb on - strand at 2063.548 kb on + strand at 2063.645 kb on - strand at 2063.786 kb on - strand, within MPMX20_01972 at 2063.920 kb on - strand at 2063.982 kb on + strand at 2064.036 kb on + strand at 2064.044 kb on - strand at 2064.044 kb on - strand at 2064.097 kb on - strand, within MPMX20_01973 at 2064.118 kb on - strand, within MPMX20_01973 at 2064.187 kb on - strand, within MPMX20_01973 at 2064.187 kb on - strand, within MPMX20_01973 at 2064.212 kb on + strand, within MPMX20_01973 at 2064.220 kb on - strand, within MPMX20_01973 at 2064.220 kb on - strand, within MPMX20_01973 at 2064.300 kb on - strand, within MPMX20_01973 at 2064.337 kb on + strand, within MPMX20_01973 at 2064.343 kb on - strand, within MPMX20_01973 at 2064.607 kb on - strand, within MPMX20_01973 at 2064.692 kb on + strand, within MPMX20_01973 at 2064.706 kb on - strand, within MPMX20_01973 at 2064.835 kb on - strand, within MPMX20_01973 at 2064.878 kb on + strand, within MPMX20_01973 at 2064.906 kb on + strand, within MPMX20_01973 at 2064.914 kb on - strand, within MPMX20_01973 at 2064.916 kb on + strand, within MPMX20_01973 at 2064.924 kb on - strand, within MPMX20_01973 at 2064.924 kb on - strand, within MPMX20_01973 at 2064.924 kb on - strand, within MPMX20_01973 at 2064.947 kb on - strand, within MPMX20_01973 at 2064.947 kb on - strand, within MPMX20_01973 at 2064.995 kb on - strand, within MPMX20_01973 at 2065.015 kb on + strand, within MPMX20_01973 at 2065.018 kb on - strand, within MPMX20_01973 at 2065.023 kb on - strand, within MPMX20_01973 at 2065.096 kb on - strand, within MPMX20_01973 at 2065.175 kb on - strand, within MPMX20_01973 at 2065.220 kb on + strand at 2065.228 kb on - strand at 2065.234 kb on + strand at 2065.269 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.276 kb on + strand at 2065.277 kb on - strand at 2065.284 kb on - strand at 2065.284 kb on - strand at 2065.284 kb on - strand at 2065.289 kb on - strand at 2065.333 kb on + strand at 2065.371 kb on + strand at 2065.478 kb on + strand at 2066.126 kb on + strand, within MPMX20_01974 at 2066.126 kb on + strand, within MPMX20_01974 at 2066.134 kb on - strand at 2066.134 kb on - strand at 2066.136 kb on + strand at 2066.252 kb on - strand at 2066.252 kb on - strand at 2066.257 kb on + strand at 2066.265 kb on - strand at 2066.277 kb on + strand at 2066.300 kb on - strand at 2066.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,062,976 - MPMX20_01970 0.66 -0.6 2,062,976 - MPMX20_01970 0.66 -1.1 2,062,976 - MPMX20_01970 0.66 -1.7 2,062,981 - MPMX20_01970 0.66 +0.7 2,063,023 + MPMX20_01970 0.69 -1.8 2,063,028 + MPMX20_01970 0.69 -0.1 2,063,028 + MPMX20_01970 0.69 +0.8 2,063,046 - MPMX20_01970 0.70 -0.3 2,063,174 - MPMX20_01970 0.78 +0.6 2,063,174 - MPMX20_01970 0.78 +1.0 2,063,274 - MPMX20_01970 0.84 -0.3 2,063,300 + MPMX20_01970 0.86 -1.2 2,063,308 - MPMX20_01970 0.87 -2.1 2,063,409 + -0.0 2,063,500 - -3.1 2,063,500 - +0.1 2,063,548 + +0.0 2,063,645 - +0.8 2,063,786 - MPMX20_01972 0.83 +0.1 2,063,920 - -0.5 2,063,982 + +2.1 2,064,036 + +2.9 2,064,044 - +2.4 2,064,044 - +1.8 2,064,097 - MPMX20_01973 0.11 +2.6 2,064,118 - MPMX20_01973 0.12 +3.2 2,064,187 - MPMX20_01973 0.17 +2.2 2,064,187 - MPMX20_01973 0.17 +2.1 2,064,212 + MPMX20_01973 0.19 +0.6 2,064,220 - MPMX20_01973 0.20 +1.3 2,064,220 - MPMX20_01973 0.20 +2.1 2,064,300 - MPMX20_01973 0.26 +0.9 2,064,337 + MPMX20_01973 0.28 +3.5 2,064,343 - MPMX20_01973 0.29 +2.8 2,064,607 - MPMX20_01973 0.48 +1.7 2,064,692 + MPMX20_01973 0.54 +1.6 2,064,706 - MPMX20_01973 0.55 +2.9 2,064,835 - MPMX20_01973 0.65 +2.0 2,064,878 + MPMX20_01973 0.68 +2.4 2,064,906 + MPMX20_01973 0.70 +2.3 2,064,914 - MPMX20_01973 0.71 +1.7 2,064,916 + MPMX20_01973 0.71 +3.5 2,064,924 - MPMX20_01973 0.71 +1.4 2,064,924 - MPMX20_01973 0.71 +3.1 2,064,924 - MPMX20_01973 0.71 +1.3 2,064,947 - MPMX20_01973 0.73 +3.2 2,064,947 - MPMX20_01973 0.73 +1.9 2,064,995 - MPMX20_01973 0.77 +2.4 2,065,015 + MPMX20_01973 0.78 +1.6 2,065,018 - MPMX20_01973 0.78 -0.2 2,065,023 - MPMX20_01973 0.79 +2.5 2,065,096 - MPMX20_01973 0.84 +1.5 2,065,175 - MPMX20_01973 0.90 +1.4 2,065,220 + +2.3 2,065,228 - +2.3 2,065,234 + +0.8 2,065,269 + +0.6 2,065,276 + +0.6 2,065,276 + -1.5 2,065,276 + +2.4 2,065,276 + +2.2 2,065,276 + +2.5 2,065,276 + +2.7 2,065,276 + +2.7 2,065,276 + +1.4 2,065,276 + +1.9 2,065,276 + +1.8 2,065,277 - +1.6 2,065,284 - +1.3 2,065,284 - +1.3 2,065,284 - +0.8 2,065,289 - +2.5 2,065,333 + -1.1 2,065,371 + +2.0 2,065,478 + +0.1 2,066,126 + MPMX20_01974 0.90 +0.8 2,066,126 + MPMX20_01974 0.90 +0.7 2,066,134 - -1.8 2,066,134 - -0.1 2,066,136 + -0.7 2,066,252 - +0.0 2,066,252 - -0.5 2,066,257 + -0.2 2,066,265 - -1.7 2,066,277 + +0.1 2,066,300 - +0.3 2,066,304 - -0.7
Or see this region's nucleotide sequence