Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00547

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00546 and MPMX20_00547 are separated by 46 nucleotidesMPMX20_00547 and MPMX20_00548 are separated by 90 nucleotides MPMX20_00546: MPMX20_00546 - hypothetical protein, at 568,418 to 569,821 _00546 MPMX20_00547: MPMX20_00547 - Ornithine carbamoyltransferase, at 569,868 to 570,872 _00547 MPMX20_00548: MPMX20_00548 - Carbamate kinase 1, at 570,963 to 571,874 _00548 Position (kb) 569 570 571Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 568.958 kb on - strand, within MPMX20_00546at 568.973 kb on + strand, within MPMX20_00546at 568.973 kb on + strand, within MPMX20_00546at 568.976 kb on - strand, within MPMX20_00546at 568.981 kb on + strand, within MPMX20_00546at 568.981 kb on - strand, within MPMX20_00546at 569.009 kb on + strand, within MPMX20_00546at 569.022 kb on - strand, within MPMX20_00546at 569.215 kb on + strand, within MPMX20_00546at 569.215 kb on + strand, within MPMX20_00546at 569.218 kb on - strand, within MPMX20_00546at 569.223 kb on - strand, within MPMX20_00546at 569.236 kb on - strand, within MPMX20_00546at 569.275 kb on + strand, within MPMX20_00546at 569.359 kb on + strand, within MPMX20_00546at 569.364 kb on + strand, within MPMX20_00546at 569.377 kb on + strand, within MPMX20_00546at 569.379 kb on + strand, within MPMX20_00546at 569.385 kb on - strand, within MPMX20_00546at 569.416 kb on - strand, within MPMX20_00546at 569.500 kb on - strand, within MPMX20_00546at 569.705 kb on + strandat 569.745 kb on + strandat 569.745 kb on + strandat 569.750 kb on + strandat 569.750 kb on + strandat 569.750 kb on + strandat 569.830 kb on + strandat 569.897 kb on + strandat 569.897 kb on + strandat 569.897 kb on + strandat 569.905 kb on - strandat 569.905 kb on - strandat 569.918 kb on + strandat 569.924 kb on - strandat 569.924 kb on - strandat 569.972 kb on + strand, within MPMX20_00547at 570.024 kb on - strand, within MPMX20_00547at 570.051 kb on + strand, within MPMX20_00547at 570.066 kb on - strand, within MPMX20_00547at 570.120 kb on - strand, within MPMX20_00547at 570.136 kb on + strand, within MPMX20_00547at 570.136 kb on + strand, within MPMX20_00547at 570.136 kb on + strand, within MPMX20_00547at 570.136 kb on + strand, within MPMX20_00547at 570.136 kb on + strand, within MPMX20_00547at 570.144 kb on - strand, within MPMX20_00547at 570.144 kb on - strand, within MPMX20_00547at 570.178 kb on + strand, within MPMX20_00547at 570.178 kb on - strand, within MPMX20_00547at 570.183 kb on - strand, within MPMX20_00547at 570.186 kb on - strand, within MPMX20_00547at 570.198 kb on + strand, within MPMX20_00547at 570.206 kb on - strand, within MPMX20_00547at 570.217 kb on + strand, within MPMX20_00547at 570.256 kb on - strand, within MPMX20_00547at 570.259 kb on + strand, within MPMX20_00547at 570.264 kb on + strand, within MPMX20_00547at 570.272 kb on - strand, within MPMX20_00547at 570.430 kb on - strand, within MPMX20_00547at 570.451 kb on + strand, within MPMX20_00547at 570.456 kb on + strand, within MPMX20_00547at 570.456 kb on + strand, within MPMX20_00547at 570.459 kb on - strand, within MPMX20_00547at 570.459 kb on - strand, within MPMX20_00547at 570.513 kb on - strand, within MPMX20_00547at 570.534 kb on + strand, within MPMX20_00547at 570.534 kb on + strand, within MPMX20_00547at 570.535 kb on + strand, within MPMX20_00547at 570.554 kb on + strand, within MPMX20_00547at 570.594 kb on + strand, within MPMX20_00547at 570.642 kb on - strand, within MPMX20_00547at 570.650 kb on + strand, within MPMX20_00547at 570.662 kb on + strand, within MPMX20_00547at 570.662 kb on + strand, within MPMX20_00547at 570.670 kb on - strand, within MPMX20_00547at 570.670 kb on - strand, within MPMX20_00547at 570.823 kb on - strandat 570.828 kb on + strandat 570.836 kb on - strandat 570.926 kb on - strandat 571.084 kb on - strand, within MPMX20_00548at 571.086 kb on + strand, within MPMX20_00548at 571.104 kb on - strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.111 kb on + strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.119 kb on - strand, within MPMX20_00548at 571.121 kb on + strand, within MPMX20_00548at 571.121 kb on + strand, within MPMX20_00548at 571.121 kb on + strand, within MPMX20_00548at 571.121 kb on + strand, within MPMX20_00548at 571.129 kb on - strand, within MPMX20_00548at 571.129 kb on - strand, within MPMX20_00548at 571.129 kb on - strand, within MPMX20_00548at 571.129 kb on - strand, within MPMX20_00548at 571.129 kb on - strand, within MPMX20_00548at 571.131 kb on + strand, within MPMX20_00548at 571.151 kb on + strand, within MPMX20_00548at 571.159 kb on - strand, within MPMX20_00548at 571.248 kb on - strand, within MPMX20_00548at 571.255 kb on - strand, within MPMX20_00548at 571.329 kb on + strand, within MPMX20_00548at 571.334 kb on + strand, within MPMX20_00548at 571.354 kb on - strand, within MPMX20_00548at 571.363 kb on + strand, within MPMX20_00548at 571.368 kb on + strand, within MPMX20_00548at 571.368 kb on + strand, within MPMX20_00548at 571.376 kb on - strand, within MPMX20_00548at 571.376 kb on - strand, within MPMX20_00548at 571.422 kb on + strand, within MPMX20_00548at 571.429 kb on + strand, within MPMX20_00548at 571.429 kb on + strand, within MPMX20_00548at 571.443 kb on + strand, within MPMX20_00548at 571.444 kb on - strand, within MPMX20_00548at 571.475 kb on - strand, within MPMX20_00548at 571.480 kb on + strand, within MPMX20_00548at 571.497 kb on - strand, within MPMX20_00548at 571.508 kb on + strand, within MPMX20_00548at 571.565 kb on + strand, within MPMX20_00548at 571.567 kb on - strand, within MPMX20_00548at 571.573 kb on - strand, within MPMX20_00548at 571.652 kb on - strand, within MPMX20_00548at 571.656 kb on + strand, within MPMX20_00548at 571.680 kb on + strand, within MPMX20_00548at 571.688 kb on - strand, within MPMX20_00548at 571.711 kb on + strand, within MPMX20_00548at 571.725 kb on - strand, within MPMX20_00548at 571.761 kb on + strand, within MPMX20_00548at 571.775 kb on - strand, within MPMX20_00548at 571.782 kb on - strand, within MPMX20_00548

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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568,958 - MPMX20_00546 0.38 -3.8
568,973 + MPMX20_00546 0.40 +0.4
568,973 + MPMX20_00546 0.40 -0.5
568,976 - MPMX20_00546 0.40 -1.4
568,981 + MPMX20_00546 0.40 -0.4
568,981 - MPMX20_00546 0.40 +0.4
569,009 + MPMX20_00546 0.42 -1.1
569,022 - MPMX20_00546 0.43 -0.2
569,215 + MPMX20_00546 0.57 -0.1
569,215 + MPMX20_00546 0.57 -0.3
569,218 - MPMX20_00546 0.57 -0.2
569,223 - MPMX20_00546 0.57 -0.6
569,236 - MPMX20_00546 0.58 -1.6
569,275 + MPMX20_00546 0.61 +0.4
569,359 + MPMX20_00546 0.67 -0.4
569,364 + MPMX20_00546 0.67 -0.5
569,377 + MPMX20_00546 0.68 -0.1
569,379 + MPMX20_00546 0.68 +1.3
569,385 - MPMX20_00546 0.69 -1.2
569,416 - MPMX20_00546 0.71 -2.0
569,500 - MPMX20_00546 0.77 -2.8
569,705 + -1.8
569,745 + +0.3
569,745 + -2.1
569,750 + -1.2
569,750 + +1.3
569,750 + -0.1
569,830 + -0.2
569,897 + -0.7
569,897 + -2.2
569,897 + -2.4
569,905 - -1.3
569,905 - -3.1
569,918 + -2.1
569,924 - -1.2
569,924 - -2.7
569,972 + MPMX20_00547 0.10 -2.9
570,024 - MPMX20_00547 0.16 -0.3
570,051 + MPMX20_00547 0.18 -0.5
570,066 - MPMX20_00547 0.20 -1.5
570,120 - MPMX20_00547 0.25 -2.2
570,136 + MPMX20_00547 0.27 -1.8
570,136 + MPMX20_00547 0.27 -0.7
570,136 + MPMX20_00547 0.27 -0.7
570,136 + MPMX20_00547 0.27 -0.1
570,136 + MPMX20_00547 0.27 -4.2
570,144 - MPMX20_00547 0.27 -2.4
570,144 - MPMX20_00547 0.27 -0.3
570,178 + MPMX20_00547 0.31 -2.6
570,178 - MPMX20_00547 0.31 +0.3
570,183 - MPMX20_00547 0.31 -3.0
570,186 - MPMX20_00547 0.32 -2.2
570,198 + MPMX20_00547 0.33 -2.0
570,206 - MPMX20_00547 0.34 -1.4
570,217 + MPMX20_00547 0.35 -0.7
570,256 - MPMX20_00547 0.39 -0.8
570,259 + MPMX20_00547 0.39 -2.1
570,264 + MPMX20_00547 0.39 -1.6
570,272 - MPMX20_00547 0.40 -1.1
570,430 - MPMX20_00547 0.56 -0.1
570,451 + MPMX20_00547 0.58 -0.5
570,456 + MPMX20_00547 0.59 -1.6
570,456 + MPMX20_00547 0.59 -1.3
570,459 - MPMX20_00547 0.59 -3.2
570,459 - MPMX20_00547 0.59 -1.4
570,513 - MPMX20_00547 0.64 -3.4
570,534 + MPMX20_00547 0.66 -0.7
570,534 + MPMX20_00547 0.66 -2.8
570,535 + MPMX20_00547 0.66 -0.5
570,554 + MPMX20_00547 0.68 +1.3
570,594 + MPMX20_00547 0.72 +0.1
570,642 - MPMX20_00547 0.77 -3.2
570,650 + MPMX20_00547 0.78 -1.3
570,662 + MPMX20_00547 0.79 +0.6
570,662 + MPMX20_00547 0.79 +1.3
570,670 - MPMX20_00547 0.80 -0.9
570,670 - MPMX20_00547 0.80 -2.5
570,823 - -1.1
570,828 + -3.1
570,836 - -3.7
570,926 - -1.6
571,084 - MPMX20_00548 0.13 -2.4
571,086 + MPMX20_00548 0.13 -0.7
571,104 - MPMX20_00548 0.15 -3.3
571,111 + MPMX20_00548 0.16 -2.4
571,111 + MPMX20_00548 0.16 -1.9
571,111 + MPMX20_00548 0.16 -4.4
571,111 + MPMX20_00548 0.16 -0.5
571,111 + MPMX20_00548 0.16 -1.5
571,111 + MPMX20_00548 0.16 -1.1
571,111 + MPMX20_00548 0.16 -0.5
571,111 + MPMX20_00548 0.16 -0.1
571,119 - MPMX20_00548 0.17 -1.7
571,119 - MPMX20_00548 0.17 -3.6
571,119 - MPMX20_00548 0.17 -1.4
571,119 - MPMX20_00548 0.17 -1.6
571,119 - MPMX20_00548 0.17 -3.2
571,119 - MPMX20_00548 0.17 -3.2
571,119 - MPMX20_00548 0.17 -3.5
571,119 - MPMX20_00548 0.17 -1.8
571,119 - MPMX20_00548 0.17 -3.0
571,121 + MPMX20_00548 0.17 -2.4
571,121 + MPMX20_00548 0.17 -2.8
571,121 + MPMX20_00548 0.17 -3.4
571,121 + MPMX20_00548 0.17 -2.8
571,129 - MPMX20_00548 0.18 -2.9
571,129 - MPMX20_00548 0.18 +1.9
571,129 - MPMX20_00548 0.18 -3.5
571,129 - MPMX20_00548 0.18 -2.5
571,129 - MPMX20_00548 0.18 -2.9
571,131 + MPMX20_00548 0.18 -2.4
571,151 + MPMX20_00548 0.21 -0.9
571,159 - MPMX20_00548 0.21 -0.5
571,248 - MPMX20_00548 0.31 +1.5
571,255 - MPMX20_00548 0.32 -3.3
571,329 + MPMX20_00548 0.40 -2.5
571,334 + MPMX20_00548 0.41 -2.7
571,354 - MPMX20_00548 0.43 -2.8
571,363 + MPMX20_00548 0.44 -0.5
571,368 + MPMX20_00548 0.44 -3.3
571,368 + MPMX20_00548 0.44 -0.3
571,376 - MPMX20_00548 0.45 -3.1
571,376 - MPMX20_00548 0.45 -0.7
571,422 + MPMX20_00548 0.50 -3.0
571,429 + MPMX20_00548 0.51 -1.4
571,429 + MPMX20_00548 0.51 -1.0
571,443 + MPMX20_00548 0.53 -1.4
571,444 - MPMX20_00548 0.53 -2.9
571,475 - MPMX20_00548 0.56 -2.6
571,480 + MPMX20_00548 0.57 -1.1
571,497 - MPMX20_00548 0.59 -1.3
571,508 + MPMX20_00548 0.60 -0.5
571,565 + MPMX20_00548 0.66 -2.6
571,567 - MPMX20_00548 0.66 -3.9
571,573 - MPMX20_00548 0.67 -3.2
571,652 - MPMX20_00548 0.76 +0.2
571,656 + MPMX20_00548 0.76 +0.3
571,680 + MPMX20_00548 0.79 -0.7
571,688 - MPMX20_00548 0.79 -1.3
571,711 + MPMX20_00548 0.82 -1.9
571,725 - MPMX20_00548 0.84 -2.3
571,761 + MPMX20_00548 0.88 -1.7
571,775 - MPMX20_00548 0.89 -1.9
571,782 - MPMX20_00548 0.90 -2.0

Or see this region's nucleotide sequence