Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00269

Experiment: L-Citrulline (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00268 and MPMX20_00269 are separated by 16 nucleotidesMPMX20_00269 and MPMX20_00270 are separated by 22 nucleotidesMPMX20_00270 and MPMX20_00271 overlap by 4 nucleotides MPMX20_00268: MPMX20_00268 - Replicative DNA helicase, at 285,317 to 286,729 _00268 MPMX20_00269: MPMX20_00269 - Alanine racemase, biosynthetic, at 286,746 to 287,825 _00269 MPMX20_00270: MPMX20_00270 - Nicotinamide riboside transporter PnuC, at 287,848 to 288,405 _00270 MPMX20_00271: MPMX20_00271 - Trifunctional NAD biosynthesis/regulator protein NadR, at 288,402 to 289,412 _00271 Position (kb) 286 287 288Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 286.847 kb on + strandat 286.867 kb on + strand, within MPMX20_00269at 286.867 kb on + strand, within MPMX20_00269at 286.871 kb on + strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.875 kb on - strand, within MPMX20_00269at 286.921 kb on + strand, within MPMX20_00269at 287.033 kb on - strand, within MPMX20_00269at 287.047 kb on + strand, within MPMX20_00269at 287.060 kb on - strand, within MPMX20_00269at 287.074 kb on + strand, within MPMX20_00269at 287.119 kb on - strand, within MPMX20_00269at 287.129 kb on - strand, within MPMX20_00269at 287.137 kb on - strand, within MPMX20_00269at 287.173 kb on + strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.181 kb on - strand, within MPMX20_00269at 287.230 kb on + strand, within MPMX20_00269at 287.248 kb on - strand, within MPMX20_00269at 287.249 kb on - strand, within MPMX20_00269at 287.299 kb on + strand, within MPMX20_00269at 287.302 kb on - strand, within MPMX20_00269at 287.307 kb on - strand, within MPMX20_00269at 287.314 kb on + strand, within MPMX20_00269at 287.322 kb on - strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.355 kb on + strand, within MPMX20_00269at 287.357 kb on + strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.363 kb on - strand, within MPMX20_00269at 287.422 kb on - strand, within MPMX20_00269at 287.544 kb on - strand, within MPMX20_00269at 287.610 kb on - strand, within MPMX20_00269at 287.612 kb on + strand, within MPMX20_00269at 287.620 kb on - strand, within MPMX20_00269at 287.663 kb on - strand, within MPMX20_00269at 287.690 kb on + strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.698 kb on - strand, within MPMX20_00269at 287.714 kb on + strand, within MPMX20_00269at 287.726 kb on + strandat 287.923 kb on - strand, within MPMX20_00270at 287.948 kb on - strand, within MPMX20_00270at 287.982 kb on + strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 287.990 kb on - strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.048 kb on + strand, within MPMX20_00270at 288.069 kb on + strand, within MPMX20_00270at 288.070 kb on + strand, within MPMX20_00270at 288.077 kb on - strand, within MPMX20_00270at 288.156 kb on - strand, within MPMX20_00270at 288.174 kb on + strand, within MPMX20_00270at 288.182 kb on - strand, within MPMX20_00270at 288.236 kb on - strand, within MPMX20_00270at 288.242 kb on + strand, within MPMX20_00270at 288.264 kb on + strand, within MPMX20_00270at 288.331 kb on + strand, within MPMX20_00270at 288.332 kb on + strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.340 kb on - strand, within MPMX20_00270at 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.368 kb on + strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.376 kb on - strandat 288.408 kb on - strandat 288.410 kb on - strandat 288.415 kb on - strandat 288.429 kb on - strandat 288.452 kb on - strandat 288.454 kb on - strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.470 kb on + strandat 288.475 kb on + strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.478 kb on - strandat 288.493 kb on - strandat 288.508 kb on - strand, within MPMX20_00271at 288.555 kb on + strand, within MPMX20_00271at 288.565 kb on + strand, within MPMX20_00271at 288.573 kb on - strand, within MPMX20_00271at 288.589 kb on + strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.597 kb on - strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.607 kb on + strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.615 kb on - strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.685 kb on + strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.693 kb on - strand, within MPMX20_00271at 288.713 kb on + strand, within MPMX20_00271at 288.752 kb on - strand, within MPMX20_00271

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Citrulline (N)
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286,847 + -0.2
286,867 + MPMX20_00269 0.11 +0.3
286,867 + MPMX20_00269 0.11 +0.7
286,871 + MPMX20_00269 0.12 +0.5
286,875 - MPMX20_00269 0.12 -0.3
286,875 - MPMX20_00269 0.12 -0.0
286,875 - MPMX20_00269 0.12 +1.1
286,921 + MPMX20_00269 0.16 -0.1
287,033 - MPMX20_00269 0.27 -0.0
287,047 + MPMX20_00269 0.28 -0.8
287,060 - MPMX20_00269 0.29 +1.4
287,074 + MPMX20_00269 0.30 -1.6
287,119 - MPMX20_00269 0.35 +0.5
287,129 - MPMX20_00269 0.35 +2.7
287,137 - MPMX20_00269 0.36 -0.1
287,173 + MPMX20_00269 0.40 +0.9
287,181 - MPMX20_00269 0.40 -2.1
287,181 - MPMX20_00269 0.40 +0.0
287,230 + MPMX20_00269 0.45 -0.9
287,248 - MPMX20_00269 0.46 +0.9
287,249 - MPMX20_00269 0.47 -1.4
287,299 + MPMX20_00269 0.51 +1.3
287,302 - MPMX20_00269 0.51 +0.6
287,307 - MPMX20_00269 0.52 +0.1
287,314 + MPMX20_00269 0.53 +0.6
287,322 - MPMX20_00269 0.53 -1.4
287,355 + MPMX20_00269 0.56 -1.4
287,355 + MPMX20_00269 0.56 -0.8
287,357 + MPMX20_00269 0.57 -1.3
287,363 - MPMX20_00269 0.57 -0.7
287,363 - MPMX20_00269 0.57 +0.5
287,422 - MPMX20_00269 0.63 -0.3
287,544 - MPMX20_00269 0.74 +0.8
287,610 - MPMX20_00269 0.80 +0.2
287,612 + MPMX20_00269 0.80 -1.6
287,620 - MPMX20_00269 0.81 -0.2
287,663 - MPMX20_00269 0.85 +0.1
287,690 + MPMX20_00269 0.87 +1.8
287,698 - MPMX20_00269 0.88 -0.3
287,698 - MPMX20_00269 0.88 +0.5
287,714 + MPMX20_00269 0.90 -0.4
287,726 + -0.5
287,923 - MPMX20_00270 0.13 +0.1
287,948 - MPMX20_00270 0.18 -0.3
287,982 + MPMX20_00270 0.24 -0.0
287,990 - MPMX20_00270 0.25 +0.2
287,990 - MPMX20_00270 0.25 +1.0
287,990 - MPMX20_00270 0.25 -0.4
288,048 + MPMX20_00270 0.36 +0.8
288,048 + MPMX20_00270 0.36 -1.3
288,069 + MPMX20_00270 0.40 -0.7
288,070 + MPMX20_00270 0.40 -0.4
288,077 - MPMX20_00270 0.41 -1.2
288,156 - MPMX20_00270 0.55 -0.3
288,174 + MPMX20_00270 0.58 -0.2
288,182 - MPMX20_00270 0.60 -0.2
288,236 - MPMX20_00270 0.70 +1.1
288,242 + MPMX20_00270 0.71 -1.7
288,264 + MPMX20_00270 0.75 +1.1
288,331 + MPMX20_00270 0.87 +0.3
288,332 + MPMX20_00270 0.87 +1.7
288,340 - MPMX20_00270 0.88 -1.7
288,340 - MPMX20_00270 0.88 +0.6
288,368 + -1.9
288,368 + +3.2
288,368 + +0.2
288,368 + -3.0
288,376 - -1.9
288,376 - +0.7
288,376 - -0.0
288,376 - -1.5
288,376 - +2.1
288,408 - +0.3
288,410 - -0.4
288,415 - +1.3
288,429 - +0.2
288,452 - +1.9
288,454 - +0.6
288,470 + -1.0
288,470 + +0.2
288,470 + -0.4
288,475 + +0.5
288,478 - +0.0
288,478 - -1.0
288,478 - +0.0
288,493 - +0.6
288,508 - MPMX20_00271 0.10 -0.0
288,555 + MPMX20_00271 0.15 -0.2
288,565 + MPMX20_00271 0.16 +0.7
288,573 - MPMX20_00271 0.17 +0.1
288,589 + MPMX20_00271 0.18 +1.5
288,597 - MPMX20_00271 0.19 -0.2
288,597 - MPMX20_00271 0.19 -0.7
288,607 + MPMX20_00271 0.20 -1.2
288,607 + MPMX20_00271 0.20 +0.6
288,615 - MPMX20_00271 0.21 +3.3
288,615 - MPMX20_00271 0.21 -1.1
288,685 + MPMX20_00271 0.28 +0.0
288,685 + MPMX20_00271 0.28 +0.6
288,693 - MPMX20_00271 0.29 -1.4
288,693 - MPMX20_00271 0.29 -0.3
288,713 + MPMX20_00271 0.31 -0.6
288,752 - MPMX20_00271 0.35 -0.3

Or see this region's nucleotide sequence