Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02692

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02691 and MPMX20_02692 are separated by 72 nucleotidesMPMX20_02692 and MPMX20_02693 are separated by 111 nucleotidesMPMX20_02693 and MPMX20_02694 are separated by 207 nucleotides MPMX20_02691: MPMX20_02691 - Periplasmic trehalase, at 2,843,194 to 2,844,879 _02691 MPMX20_02692: MPMX20_02692 - Ferrichrome outer membrane transporter/phage receptor, at 2,844,952 to 2,847,054 _02692 MPMX20_02693: MPMX20_02693 - hypothetical protein, at 2,847,166 to 2,847,420 _02693 MPMX20_02694: MPMX20_02694 - Flagellar brake protein YcgR, at 2,847,628 to 2,848,359 _02694 Position (kb) 2844 2845 2846 2847 2848Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2843.952 kb on - strand, within MPMX20_02691at 2843.986 kb on + strand, within MPMX20_02691at 2843.986 kb on + strand, within MPMX20_02691at 2843.986 kb on + strand, within MPMX20_02691at 2843.994 kb on - strand, within MPMX20_02691at 2844.011 kb on + strand, within MPMX20_02691at 2844.044 kb on + strand, within MPMX20_02691at 2844.051 kb on - strand, within MPMX20_02691at 2844.068 kb on - strand, within MPMX20_02691at 2844.185 kb on + strand, within MPMX20_02691at 2844.185 kb on + strand, within MPMX20_02691at 2844.381 kb on + strand, within MPMX20_02691at 2844.401 kb on - strand, within MPMX20_02691at 2844.456 kb on + strand, within MPMX20_02691at 2844.473 kb on + strand, within MPMX20_02691at 2844.513 kb on + strand, within MPMX20_02691at 2844.572 kb on + strand, within MPMX20_02691at 2844.600 kb on + strand, within MPMX20_02691at 2844.600 kb on + strand, within MPMX20_02691at 2844.608 kb on - strand, within MPMX20_02691at 2844.608 kb on - strand, within MPMX20_02691at 2844.608 kb on - strand, within MPMX20_02691at 2844.624 kb on - strand, within MPMX20_02691at 2844.629 kb on - strand, within MPMX20_02691at 2844.648 kb on + strand, within MPMX20_02691at 2844.704 kb on + strand, within MPMX20_02691at 2844.751 kb on - strandat 2844.789 kb on - strandat 2844.791 kb on + strandat 2844.815 kb on - strandat 2844.892 kb on + strandat 2844.892 kb on + strandat 2844.892 kb on + strandat 2844.900 kb on - strandat 2844.900 kb on - strandat 2844.900 kb on - strandat 2844.906 kb on + strandat 2844.906 kb on + strandat 2844.914 kb on - strandat 2844.914 kb on - strandat 2844.929 kb on + strandat 2844.945 kb on - strandat 2844.945 kb on - strandat 2844.945 kb on - strandat 2844.958 kb on + strandat 2845.022 kb on - strandat 2845.056 kb on - strandat 2845.070 kb on - strandat 2845.077 kb on - strandat 2845.187 kb on + strand, within MPMX20_02692at 2845.248 kb on - strand, within MPMX20_02692at 2845.339 kb on - strand, within MPMX20_02692at 2845.362 kb on - strand, within MPMX20_02692at 2845.397 kb on + strand, within MPMX20_02692at 2845.482 kb on - strand, within MPMX20_02692at 2845.536 kb on + strand, within MPMX20_02692at 2845.539 kb on - strand, within MPMX20_02692at 2845.607 kb on - strand, within MPMX20_02692at 2845.616 kb on - strand, within MPMX20_02692at 2845.767 kb on + strand, within MPMX20_02692at 2845.785 kb on - strand, within MPMX20_02692at 2845.808 kb on - strand, within MPMX20_02692at 2845.844 kb on + strand, within MPMX20_02692at 2845.852 kb on - strand, within MPMX20_02692at 2845.852 kb on - strand, within MPMX20_02692at 2845.852 kb on - strand, within MPMX20_02692at 2845.859 kb on - strand, within MPMX20_02692at 2845.872 kb on + strand, within MPMX20_02692at 2845.872 kb on + strand, within MPMX20_02692at 2845.880 kb on - strand, within MPMX20_02692at 2845.880 kb on - strand, within MPMX20_02692at 2845.964 kb on - strand, within MPMX20_02692at 2845.993 kb on - strand, within MPMX20_02692at 2846.002 kb on + strand, within MPMX20_02692at 2846.061 kb on - strand, within MPMX20_02692at 2846.066 kb on - strand, within MPMX20_02692at 2846.103 kb on + strand, within MPMX20_02692at 2846.111 kb on - strand, within MPMX20_02692at 2846.126 kb on - strand, within MPMX20_02692at 2846.159 kb on - strand, within MPMX20_02692at 2846.189 kb on - strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.214 kb on + strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.222 kb on - strand, within MPMX20_02692at 2846.248 kb on - strand, within MPMX20_02692at 2846.299 kb on - strand, within MPMX20_02692at 2846.309 kb on - strand, within MPMX20_02692at 2846.331 kb on + strand, within MPMX20_02692at 2846.416 kb on - strand, within MPMX20_02692at 2846.450 kb on + strand, within MPMX20_02692at 2846.458 kb on - strand, within MPMX20_02692at 2846.516 kb on - strand, within MPMX20_02692at 2846.539 kb on + strand, within MPMX20_02692at 2846.600 kb on + strand, within MPMX20_02692at 2846.608 kb on - strand, within MPMX20_02692at 2846.610 kb on + strand, within MPMX20_02692at 2846.618 kb on - strand, within MPMX20_02692at 2846.632 kb on - strand, within MPMX20_02692at 2846.695 kb on + strand, within MPMX20_02692at 2846.703 kb on - strand, within MPMX20_02692at 2846.768 kb on - strand, within MPMX20_02692at 2846.864 kb on + strandat 2846.882 kb on + strandat 2846.882 kb on + strandat 2846.882 kb on + strandat 2846.890 kb on - strandat 2846.936 kb on + strandat 2846.944 kb on - strandat 2846.946 kb on + strandat 2846.946 kb on + strandat 2846.949 kb on - strandat 2846.949 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2846.954 kb on - strandat 2847.014 kb on + strandat 2847.014 kb on + strandat 2847.022 kb on - strandat 2847.164 kb on + strandat 2847.181 kb on - strandat 2847.225 kb on + strand, within MPMX20_02693at 2847.225 kb on + strand, within MPMX20_02693at 2847.325 kb on + strand, within MPMX20_02693at 2847.369 kb on - strand, within MPMX20_02693at 2847.423 kb on - strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.438 kb on + strandat 2847.446 kb on - strandat 2847.446 kb on - strandat 2847.446 kb on - strandat 2847.461 kb on + strandat 2847.461 kb on - strandat 2847.528 kb on - strandat 2847.574 kb on + strandat 2847.582 kb on - strandat 2847.589 kb on + strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.597 kb on - strandat 2847.603 kb on + strandat 2847.607 kb on - strandat 2847.608 kb on + strandat 2847.616 kb on + strandat 2847.681 kb on - strandat 2847.681 kb on - strandat 2847.840 kb on - strand, within MPMX20_02694at 2847.948 kb on + strand, within MPMX20_02694at 2847.948 kb on + strand, within MPMX20_02694at 2847.953 kb on + strand, within MPMX20_02694at 2847.956 kb on - strand, within MPMX20_02694at 2847.956 kb on - strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2847.993 kb on + strand, within MPMX20_02694at 2848.001 kb on - strand, within MPMX20_02694

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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2,843,952 - MPMX20_02691 0.45 +1.0
2,843,986 + MPMX20_02691 0.47 +0.6
2,843,986 + MPMX20_02691 0.47 +0.6
2,843,986 + MPMX20_02691 0.47 +1.0
2,843,994 - MPMX20_02691 0.47 -0.2
2,844,011 + MPMX20_02691 0.48 +0.8
2,844,044 + MPMX20_02691 0.50 -0.1
2,844,051 - MPMX20_02691 0.51 -0.8
2,844,068 - MPMX20_02691 0.52 -0.3
2,844,185 + MPMX20_02691 0.59 -0.3
2,844,185 + MPMX20_02691 0.59 -0.7
2,844,381 + MPMX20_02691 0.70 -0.1
2,844,401 - MPMX20_02691 0.72 -0.5
2,844,456 + MPMX20_02691 0.75 -1.2
2,844,473 + MPMX20_02691 0.76 +0.4
2,844,513 + MPMX20_02691 0.78 -2.6
2,844,572 + MPMX20_02691 0.82 -1.1
2,844,600 + MPMX20_02691 0.83 -0.7
2,844,600 + MPMX20_02691 0.83 -0.6
2,844,608 - MPMX20_02691 0.84 -0.9
2,844,608 - MPMX20_02691 0.84 -1.2
2,844,608 - MPMX20_02691 0.84 +0.3
2,844,624 - MPMX20_02691 0.85 -0.6
2,844,629 - MPMX20_02691 0.85 +0.5
2,844,648 + MPMX20_02691 0.86 -1.3
2,844,704 + MPMX20_02691 0.90 -1.9
2,844,751 - +0.7
2,844,789 - +0.3
2,844,791 + -0.2
2,844,815 - -0.2
2,844,892 + -0.2
2,844,892 + +1.5
2,844,892 + +0.7
2,844,900 - -0.5
2,844,900 - -1.3
2,844,900 - +2.1
2,844,906 + -0.4
2,844,906 + -1.2
2,844,914 - +1.0
2,844,914 - -0.9
2,844,929 + -0.4
2,844,945 - +0.5
2,844,945 - -1.9
2,844,945 - -0.5
2,844,958 + +0.3
2,845,022 - +0.0
2,845,056 - +0.6
2,845,070 - +0.6
2,845,077 - -0.6
2,845,187 + MPMX20_02692 0.11 -1.2
2,845,248 - MPMX20_02692 0.14 +0.8
2,845,339 - MPMX20_02692 0.18 +3.3
2,845,362 - MPMX20_02692 0.19 +1.0
2,845,397 + MPMX20_02692 0.21 -0.6
2,845,482 - MPMX20_02692 0.25 -0.5
2,845,536 + MPMX20_02692 0.28 -0.2
2,845,539 - MPMX20_02692 0.28 -0.3
2,845,607 - MPMX20_02692 0.31 +0.4
2,845,616 - MPMX20_02692 0.32 +0.4
2,845,767 + MPMX20_02692 0.39 -1.4
2,845,785 - MPMX20_02692 0.40 -0.1
2,845,808 - MPMX20_02692 0.41 +1.3
2,845,844 + MPMX20_02692 0.42 -0.9
2,845,852 - MPMX20_02692 0.43 -0.7
2,845,852 - MPMX20_02692 0.43 +0.8
2,845,852 - MPMX20_02692 0.43 -0.6
2,845,859 - MPMX20_02692 0.43 -0.6
2,845,872 + MPMX20_02692 0.44 -0.5
2,845,872 + MPMX20_02692 0.44 +0.6
2,845,880 - MPMX20_02692 0.44 -1.2
2,845,880 - MPMX20_02692 0.44 -0.2
2,845,964 - MPMX20_02692 0.48 +0.0
2,845,993 - MPMX20_02692 0.50 +1.0
2,846,002 + MPMX20_02692 0.50 -1.1
2,846,061 - MPMX20_02692 0.53 -0.9
2,846,066 - MPMX20_02692 0.53 +1.1
2,846,103 + MPMX20_02692 0.55 -0.0
2,846,111 - MPMX20_02692 0.55 -0.6
2,846,126 - MPMX20_02692 0.56 +0.3
2,846,159 - MPMX20_02692 0.57 +1.5
2,846,189 - MPMX20_02692 0.59 -2.0
2,846,214 + MPMX20_02692 0.60 -1.1
2,846,214 + MPMX20_02692 0.60 +0.9
2,846,214 + MPMX20_02692 0.60 +0.4
2,846,214 + MPMX20_02692 0.60 -0.4
2,846,214 + MPMX20_02692 0.60 -0.5
2,846,214 + MPMX20_02692 0.60 -1.0
2,846,214 + MPMX20_02692 0.60 -0.6
2,846,214 + MPMX20_02692 0.60 -0.3
2,846,214 + MPMX20_02692 0.60 -0.7
2,846,222 - MPMX20_02692 0.60 -0.8
2,846,222 - MPMX20_02692 0.60 +1.6
2,846,222 - MPMX20_02692 0.60 +0.0
2,846,222 - MPMX20_02692 0.60 -1.2
2,846,222 - MPMX20_02692 0.60 -0.1
2,846,222 - MPMX20_02692 0.60 -1.1
2,846,222 - MPMX20_02692 0.60 -0.4
2,846,222 - MPMX20_02692 0.60 -0.6
2,846,222 - MPMX20_02692 0.60 +0.6
2,846,222 - MPMX20_02692 0.60 +0.5
2,846,222 - MPMX20_02692 0.60 -1.1
2,846,222 - MPMX20_02692 0.60 +0.2
2,846,248 - MPMX20_02692 0.62 -0.1
2,846,299 - MPMX20_02692 0.64 +1.1
2,846,309 - MPMX20_02692 0.65 -1.1
2,846,331 + MPMX20_02692 0.66 +1.1
2,846,416 - MPMX20_02692 0.70 -0.9
2,846,450 + MPMX20_02692 0.71 +0.2
2,846,458 - MPMX20_02692 0.72 -0.2
2,846,516 - MPMX20_02692 0.74 -0.7
2,846,539 + MPMX20_02692 0.75 +0.2
2,846,600 + MPMX20_02692 0.78 -1.6
2,846,608 - MPMX20_02692 0.79 +0.3
2,846,610 + MPMX20_02692 0.79 +0.6
2,846,618 - MPMX20_02692 0.79 -1.3
2,846,632 - MPMX20_02692 0.80 +0.2
2,846,695 + MPMX20_02692 0.83 +1.5
2,846,703 - MPMX20_02692 0.83 +0.4
2,846,768 - MPMX20_02692 0.86 +0.8
2,846,864 + -1.3
2,846,882 + -0.6
2,846,882 + -0.5
2,846,882 + +1.5
2,846,890 - -0.3
2,846,936 + -0.3
2,846,944 - -2.1
2,846,946 + -2.5
2,846,946 + +0.3
2,846,949 - -2.1
2,846,949 - +1.1
2,846,954 - +1.0
2,846,954 - -0.9
2,846,954 - +0.3
2,846,954 - +0.0
2,847,014 + -0.8
2,847,014 + -0.8
2,847,022 - -0.2
2,847,164 + -0.5
2,847,181 - +1.0
2,847,225 + MPMX20_02693 0.23 +1.4
2,847,225 + MPMX20_02693 0.23 -0.8
2,847,325 + MPMX20_02693 0.62 +0.8
2,847,369 - MPMX20_02693 0.80 +1.2
2,847,423 - +1.2
2,847,438 + -2.1
2,847,438 + -0.1
2,847,438 + +1.2
2,847,438 + -0.8
2,847,446 - -0.6
2,847,446 - -0.9
2,847,446 - -2.0
2,847,461 + -0.3
2,847,461 - -1.1
2,847,528 - +0.1
2,847,574 + +0.8
2,847,582 - +0.4
2,847,589 + -0.9
2,847,597 - +1.2
2,847,597 - -2.1
2,847,597 - -0.3
2,847,597 - -0.5
2,847,603 + +0.2
2,847,607 - +1.0
2,847,608 + +0.2
2,847,616 + -0.3
2,847,681 - -0.1
2,847,681 - -0.4
2,847,840 - MPMX20_02694 0.29 +0.3
2,847,948 + MPMX20_02694 0.44 +0.9
2,847,948 + MPMX20_02694 0.44 -0.7
2,847,953 + MPMX20_02694 0.44 +0.2
2,847,956 - MPMX20_02694 0.45 -0.2
2,847,956 - MPMX20_02694 0.45 -0.3
2,847,993 + MPMX20_02694 0.50 +0.6
2,847,993 + MPMX20_02694 0.50 +0.1
2,847,993 + MPMX20_02694 0.50 +0.5
2,847,993 + MPMX20_02694 0.50 +0.3
2,847,993 + MPMX20_02694 0.50 +1.0
2,848,001 - MPMX20_02694 0.51 -0.4

Or see this region's nucleotide sequence