Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00965 and MPMX20_00966 are separated by 14 nucleotides MPMX20_00966 and MPMX20_00967 overlap by 4 nucleotides MPMX20_00967 and MPMX20_00968 are separated by 249 nucleotides MPMX20_00968 and MPMX20_00969 overlap by 4 nucleotides
MPMX20_00965: MPMX20_00965 - Peptide antibiotic transporter SbmA, at 1,018,036 to 1,019,256
_00965
MPMX20_00966: MPMX20_00966 - hypothetical protein, at 1,019,271 to 1,020,368
_00966
MPMX20_00967: MPMX20_00967 - Inner membrane protein YaiY, at 1,020,365 to 1,020,667
_00967
MPMX20_00968: MPMX20_00968 - hypothetical protein, at 1,020,917 to 1,021,153
_00968
MPMX20_00969: MPMX20_00969 - D-alanine--D-alanine ligase A, at 1,021,150 to 1,022,250
_00969
Position (kb)
1019
1020
1021 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1018.273 kb on - strand, within MPMX20_00965 at 1018.292 kb on + strand, within MPMX20_00965 at 1018.335 kb on - strand, within MPMX20_00965 at 1018.353 kb on + strand, within MPMX20_00965 at 1018.362 kb on + strand, within MPMX20_00965 at 1018.367 kb on + strand, within MPMX20_00965 at 1018.367 kb on + strand, within MPMX20_00965 at 1018.375 kb on - strand, within MPMX20_00965 at 1018.385 kb on + strand, within MPMX20_00965 at 1018.389 kb on + strand, within MPMX20_00965 at 1018.389 kb on + strand, within MPMX20_00965 at 1018.397 kb on - strand, within MPMX20_00965 at 1018.397 kb on - strand, within MPMX20_00965 at 1018.424 kb on + strand, within MPMX20_00965 at 1018.424 kb on + strand, within MPMX20_00965 at 1018.471 kb on - strand, within MPMX20_00965 at 1018.551 kb on + strand, within MPMX20_00965 at 1018.554 kb on + strand, within MPMX20_00965 at 1018.568 kb on + strand, within MPMX20_00965 at 1018.576 kb on - strand, within MPMX20_00965 at 1018.592 kb on + strand, within MPMX20_00965 at 1018.592 kb on + strand, within MPMX20_00965 at 1018.600 kb on - strand, within MPMX20_00965 at 1018.611 kb on + strand, within MPMX20_00965 at 1018.611 kb on + strand, within MPMX20_00965 at 1018.815 kb on + strand, within MPMX20_00965 at 1018.815 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.820 kb on + strand, within MPMX20_00965 at 1018.828 kb on - strand, within MPMX20_00965 at 1018.828 kb on - strand, within MPMX20_00965 at 1018.828 kb on - strand, within MPMX20_00965 at 1018.879 kb on + strand, within MPMX20_00965 at 1018.884 kb on + strand, within MPMX20_00965 at 1018.887 kb on - strand, within MPMX20_00965 at 1018.887 kb on - strand, within MPMX20_00965 at 1018.900 kb on + strand, within MPMX20_00965 at 1018.933 kb on - strand, within MPMX20_00965 at 1018.938 kb on + strand, within MPMX20_00965 at 1018.938 kb on + strand, within MPMX20_00965 at 1018.938 kb on + strand, within MPMX20_00965 at 1018.938 kb on + strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.946 kb on - strand, within MPMX20_00965 at 1018.969 kb on - strand, within MPMX20_00965 at 1019.049 kb on + strand, within MPMX20_00965 at 1019.134 kb on - strand, within MPMX20_00965 at 1019.167 kb on + strand at 1019.171 kb on - strand at 1019.196 kb on - strand at 1019.206 kb on - strand at 1019.206 kb on - strand at 1019.219 kb on + strand at 1019.219 kb on + strand at 1019.227 kb on - strand at 1019.236 kb on - strand at 1019.254 kb on - strand at 1019.268 kb on + strand at 1019.288 kb on - strand at 1019.335 kb on - strand at 1019.385 kb on - strand, within MPMX20_00966 at 1019.392 kb on + strand, within MPMX20_00966 at 1019.395 kb on - strand, within MPMX20_00966 at 1019.395 kb on - strand, within MPMX20_00966 at 1019.542 kb on + strand, within MPMX20_00966 at 1019.542 kb on + strand, within MPMX20_00966 at 1019.550 kb on - strand, within MPMX20_00966 at 1019.550 kb on - strand, within MPMX20_00966 at 1019.550 kb on - strand, within MPMX20_00966 at 1019.550 kb on - strand, within MPMX20_00966 at 1019.560 kb on - strand, within MPMX20_00966 at 1019.565 kb on - strand, within MPMX20_00966 at 1019.567 kb on + strand, within MPMX20_00966 at 1019.610 kb on + strand, within MPMX20_00966 at 1019.618 kb on - strand, within MPMX20_00966 at 1019.690 kb on - strand, within MPMX20_00966 at 1019.706 kb on + strand, within MPMX20_00966 at 1019.730 kb on + strand, within MPMX20_00966 at 1019.754 kb on + strand, within MPMX20_00966 at 1019.763 kb on - strand, within MPMX20_00966 at 1019.771 kb on - strand, within MPMX20_00966 at 1019.779 kb on + strand, within MPMX20_00966 at 1019.779 kb on + strand, within MPMX20_00966 at 1019.787 kb on - strand, within MPMX20_00966 at 1019.812 kb on + strand, within MPMX20_00966 at 1019.812 kb on + strand, within MPMX20_00966 at 1019.815 kb on - strand, within MPMX20_00966 at 1019.945 kb on - strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1019.972 kb on + strand, within MPMX20_00966 at 1020.037 kb on + strand, within MPMX20_00966 at 1020.099 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.127 kb on + strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.135 kb on - strand, within MPMX20_00966 at 1020.203 kb on + strand, within MPMX20_00966 at 1020.203 kb on + strand, within MPMX20_00966 at 1020.256 kb on + strand, within MPMX20_00966 at 1020.279 kb on - strand at 1020.298 kb on + strand at 1020.313 kb on - strand at 1020.361 kb on - strand at 1020.388 kb on + strand at 1020.404 kb on + strand, within MPMX20_00967 at 1020.421 kb on - strand, within MPMX20_00967 at 1020.439 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.486 kb on + strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.494 kb on - strand, within MPMX20_00967 at 1020.501 kb on + strand, within MPMX20_00967 at 1020.526 kb on - strand, within MPMX20_00967 at 1020.526 kb on - strand, within MPMX20_00967 at 1020.528 kb on - strand, within MPMX20_00967 at 1020.528 kb on - strand, within MPMX20_00967 at 1020.564 kb on - strand, within MPMX20_00967 at 1020.564 kb on - strand, within MPMX20_00967 at 1020.586 kb on + strand, within MPMX20_00967 at 1020.711 kb on + strand at 1020.725 kb on + strand at 1020.725 kb on + strand at 1020.725 kb on + strand at 1020.733 kb on - strand at 1020.733 kb on - strand at 1020.743 kb on + strand at 1020.766 kb on - strand at 1020.766 kb on - strand at 1020.784 kb on - strand at 1020.797 kb on - strand at 1020.858 kb on + strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.866 kb on - strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.927 kb on + strand at 1020.935 kb on - strand at 1020.935 kb on - strand at 1020.935 kb on - strand at 1020.961 kb on - strand, within MPMX20_00968 at 1020.995 kb on + strand, within MPMX20_00968 at 1021.006 kb on + strand, within MPMX20_00968 at 1021.014 kb on - strand, within MPMX20_00968 at 1021.033 kb on + strand, within MPMX20_00968 at 1021.195 kb on - strand at 1021.219 kb on + strand at 1021.219 kb on + strand at 1021.227 kb on + strand at 1021.227 kb on - strand at 1021.227 kb on - strand at 1021.232 kb on + strand at 1021.235 kb on - strand at 1021.268 kb on - strand, within MPMX20_00969 at 1021.268 kb on - strand, within MPMX20_00969 at 1021.296 kb on - strand, within MPMX20_00969 at 1021.296 kb on - strand, within MPMX20_00969 at 1021.344 kb on + strand, within MPMX20_00969
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 1,018,273 - MPMX20_00965 0.19 -0.5 1,018,292 + MPMX20_00965 0.21 -0.6 1,018,335 - MPMX20_00965 0.24 -1.2 1,018,353 + MPMX20_00965 0.26 -0.6 1,018,362 + MPMX20_00965 0.27 -1.2 1,018,367 + MPMX20_00965 0.27 +2.1 1,018,367 + MPMX20_00965 0.27 -0.4 1,018,375 - MPMX20_00965 0.28 +0.5 1,018,385 + MPMX20_00965 0.29 -0.9 1,018,389 + MPMX20_00965 0.29 -0.7 1,018,389 + MPMX20_00965 0.29 -0.3 1,018,397 - MPMX20_00965 0.30 -0.8 1,018,397 - MPMX20_00965 0.30 -0.6 1,018,424 + MPMX20_00965 0.32 -0.9 1,018,424 + MPMX20_00965 0.32 -0.8 1,018,471 - MPMX20_00965 0.36 -1.8 1,018,551 + MPMX20_00965 0.42 +0.9 1,018,554 + MPMX20_00965 0.42 +1.6 1,018,568 + MPMX20_00965 0.44 +0.5 1,018,576 - MPMX20_00965 0.44 +0.3 1,018,592 + MPMX20_00965 0.46 +1.0 1,018,592 + MPMX20_00965 0.46 +0.2 1,018,600 - MPMX20_00965 0.46 +0.6 1,018,611 + MPMX20_00965 0.47 -2.6 1,018,611 + MPMX20_00965 0.47 +0.5 1,018,815 + MPMX20_00965 0.64 -0.9 1,018,815 + MPMX20_00965 0.64 -0.3 1,018,820 + MPMX20_00965 0.64 -0.1 1,018,820 + MPMX20_00965 0.64 -0.0 1,018,820 + MPMX20_00965 0.64 +0.9 1,018,820 + MPMX20_00965 0.64 -0.1 1,018,820 + MPMX20_00965 0.64 +2.2 1,018,820 + MPMX20_00965 0.64 +0.2 1,018,820 + MPMX20_00965 0.64 +1.1 1,018,828 - MPMX20_00965 0.65 +1.8 1,018,828 - MPMX20_00965 0.65 -0.5 1,018,828 - MPMX20_00965 0.65 -1.1 1,018,879 + MPMX20_00965 0.69 -0.7 1,018,884 + MPMX20_00965 0.69 -0.5 1,018,887 - MPMX20_00965 0.70 -0.2 1,018,887 - MPMX20_00965 0.70 -0.7 1,018,900 + MPMX20_00965 0.71 +0.6 1,018,933 - MPMX20_00965 0.73 +0.6 1,018,938 + MPMX20_00965 0.74 +0.1 1,018,938 + MPMX20_00965 0.74 -0.7 1,018,938 + MPMX20_00965 0.74 +0.8 1,018,938 + MPMX20_00965 0.74 +0.9 1,018,946 - MPMX20_00965 0.75 +0.5 1,018,946 - MPMX20_00965 0.75 +0.3 1,018,946 - MPMX20_00965 0.75 -0.1 1,018,946 - MPMX20_00965 0.75 +0.8 1,018,946 - MPMX20_00965 0.75 -1.5 1,018,946 - MPMX20_00965 0.75 -0.7 1,018,969 - MPMX20_00965 0.76 -2.1 1,019,049 + MPMX20_00965 0.83 -1.2 1,019,134 - MPMX20_00965 0.90 -0.7 1,019,167 + -0.9 1,019,171 - -0.7 1,019,196 - -0.6 1,019,206 - +0.1 1,019,206 - -1.1 1,019,219 + +0.5 1,019,219 + -1.2 1,019,227 - -0.8 1,019,236 - +0.2 1,019,254 - -1.1 1,019,268 + +0.6 1,019,288 - -0.6 1,019,335 - -1.2 1,019,385 - MPMX20_00966 0.10 +0.2 1,019,392 + MPMX20_00966 0.11 -0.8 1,019,395 - MPMX20_00966 0.11 +0.0 1,019,395 - MPMX20_00966 0.11 -0.7 1,019,542 + MPMX20_00966 0.25 -0.1 1,019,542 + MPMX20_00966 0.25 -0.6 1,019,550 - MPMX20_00966 0.25 +0.2 1,019,550 - MPMX20_00966 0.25 +0.5 1,019,550 - MPMX20_00966 0.25 -0.2 1,019,550 - MPMX20_00966 0.25 -1.2 1,019,560 - MPMX20_00966 0.26 -0.4 1,019,565 - MPMX20_00966 0.27 -0.4 1,019,567 + MPMX20_00966 0.27 -0.2 1,019,610 + MPMX20_00966 0.31 -0.9 1,019,618 - MPMX20_00966 0.32 -3.0 1,019,690 - MPMX20_00966 0.38 -1.0 1,019,706 + MPMX20_00966 0.40 -0.8 1,019,730 + MPMX20_00966 0.42 -1.9 1,019,754 + MPMX20_00966 0.44 -0.2 1,019,763 - MPMX20_00966 0.45 +0.0 1,019,771 - MPMX20_00966 0.46 -0.8 1,019,779 + MPMX20_00966 0.46 +0.9 1,019,779 + MPMX20_00966 0.46 +1.2 1,019,787 - MPMX20_00966 0.47 +1.2 1,019,812 + MPMX20_00966 0.49 +1.1 1,019,812 + MPMX20_00966 0.49 +1.1 1,019,815 - MPMX20_00966 0.50 -0.6 1,019,945 - MPMX20_00966 0.61 -0.0 1,019,972 + MPMX20_00966 0.64 -1.9 1,019,972 + MPMX20_00966 0.64 +0.9 1,019,972 + MPMX20_00966 0.64 -1.6 1,020,037 + MPMX20_00966 0.70 +0.8 1,020,099 + MPMX20_00966 0.75 +0.8 1,020,127 + MPMX20_00966 0.78 -1.3 1,020,127 + MPMX20_00966 0.78 -1.6 1,020,127 + MPMX20_00966 0.78 -0.6 1,020,127 + MPMX20_00966 0.78 +2.5 1,020,127 + MPMX20_00966 0.78 +0.3 1,020,127 + MPMX20_00966 0.78 -1.4 1,020,135 - MPMX20_00966 0.79 +0.2 1,020,135 - MPMX20_00966 0.79 -0.4 1,020,135 - MPMX20_00966 0.79 -1.2 1,020,135 - MPMX20_00966 0.79 -1.4 1,020,135 - MPMX20_00966 0.79 +0.6 1,020,135 - MPMX20_00966 0.79 -0.2 1,020,203 + MPMX20_00966 0.85 +0.1 1,020,203 + MPMX20_00966 0.85 +0.3 1,020,256 + MPMX20_00966 0.90 +0.5 1,020,279 - +0.3 1,020,298 + -0.9 1,020,313 - -0.3 1,020,361 - -0.1 1,020,388 + -0.5 1,020,404 + MPMX20_00967 0.13 +0.9 1,020,421 - MPMX20_00967 0.18 -0.7 1,020,439 + MPMX20_00967 0.24 -1.3 1,020,486 + MPMX20_00967 0.40 -0.8 1,020,486 + MPMX20_00967 0.40 -0.8 1,020,486 + MPMX20_00967 0.40 -2.9 1,020,494 - MPMX20_00967 0.43 +0.1 1,020,494 - MPMX20_00967 0.43 -1.9 1,020,494 - MPMX20_00967 0.43 -1.5 1,020,501 + MPMX20_00967 0.45 -0.7 1,020,526 - MPMX20_00967 0.53 -1.6 1,020,526 - MPMX20_00967 0.53 -1.1 1,020,528 - MPMX20_00967 0.54 -0.4 1,020,528 - MPMX20_00967 0.54 -0.4 1,020,564 - MPMX20_00967 0.66 +1.2 1,020,564 - MPMX20_00967 0.66 -0.4 1,020,586 + MPMX20_00967 0.73 -0.3 1,020,711 + +0.8 1,020,725 + -0.3 1,020,725 + +0.5 1,020,725 + +1.9 1,020,733 - -1.6 1,020,733 - -0.9 1,020,743 + +0.7 1,020,766 - -0.2 1,020,766 - +0.1 1,020,784 - +0.1 1,020,797 - -1.9 1,020,858 + +1.2 1,020,866 - -0.8 1,020,866 - -1.0 1,020,866 - +1.5 1,020,866 - -1.1 1,020,866 - -0.2 1,020,866 - -0.5 1,020,866 - -0.4 1,020,927 + -0.7 1,020,927 + +0.2 1,020,927 + +0.4 1,020,927 + +0.2 1,020,927 + +1.0 1,020,927 + -1.7 1,020,927 + -0.3 1,020,935 - -1.2 1,020,935 - +0.1 1,020,935 - -1.5 1,020,961 - MPMX20_00968 0.19 +0.3 1,020,995 + MPMX20_00968 0.33 +0.8 1,021,006 + MPMX20_00968 0.38 +0.2 1,021,014 - MPMX20_00968 0.41 +0.4 1,021,033 + MPMX20_00968 0.49 +0.9 1,021,195 - +0.2 1,021,219 + -0.1 1,021,219 + +0.4 1,021,227 + -0.3 1,021,227 - -0.6 1,021,227 - +1.2 1,021,232 + -1.7 1,021,235 - -2.6 1,021,268 - MPMX20_00969 0.11 -0.3 1,021,268 - MPMX20_00969 0.11 +0.5 1,021,296 - MPMX20_00969 0.13 -0.0 1,021,296 - MPMX20_00969 0.13 -0.7 1,021,344 + MPMX20_00969 0.18 -1.1
Or see this region's nucleotide sequence