Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00907

Experiment: Gly-DL-Asp (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00905 and MPMX20_00906 are separated by 18 nucleotidesMPMX20_00906 and MPMX20_00907 are separated by 2 nucleotidesMPMX20_00907 and MPMX20_00908 are separated by 9 nucleotides MPMX20_00905: MPMX20_00905 - Glutathione-binding protein GsiB, at 952,137 to 953,651 _00905 MPMX20_00906: MPMX20_00906 - Glutathione transport system permease protein GsiC, at 953,670 to 954,611 _00906 MPMX20_00907: MPMX20_00907 - Glutathione transport system permease protein GsiD, at 954,614 to 955,489 _00907 MPMX20_00908: MPMX20_00908 - Glutathione hydrolase-like YwrD proenzyme, at 955,499 to 957,100 _00908 Position (kb) 954 955 956Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 953.622 kb on - strandat 953.629 kb on - strandat 953.631 kb on + strandat 953.632 kb on + strandat 953.654 kb on + strandat 953.668 kb on - strandat 953.691 kb on + strandat 953.706 kb on + strandat 953.713 kb on + strandat 953.837 kb on - strand, within MPMX20_00906at 953.846 kb on + strand, within MPMX20_00906at 953.851 kb on + strand, within MPMX20_00906at 953.851 kb on + strand, within MPMX20_00906at 953.854 kb on - strand, within MPMX20_00906at 953.859 kb on - strand, within MPMX20_00906at 953.859 kb on - strand, within MPMX20_00906at 953.859 kb on - strand, within MPMX20_00906at 953.886 kb on + strand, within MPMX20_00906at 953.896 kb on + strand, within MPMX20_00906at 953.925 kb on - strand, within MPMX20_00906at 953.970 kb on - strand, within MPMX20_00906at 954.220 kb on - strand, within MPMX20_00906at 954.220 kb on - strand, within MPMX20_00906at 954.220 kb on - strand, within MPMX20_00906at 954.223 kb on + strand, within MPMX20_00906at 954.269 kb on - strand, within MPMX20_00906at 954.320 kb on + strand, within MPMX20_00906at 954.320 kb on + strand, within MPMX20_00906at 954.328 kb on - strand, within MPMX20_00906at 954.390 kb on + strand, within MPMX20_00906at 954.417 kb on + strand, within MPMX20_00906at 954.417 kb on + strand, within MPMX20_00906at 954.427 kb on + strand, within MPMX20_00906at 954.454 kb on - strand, within MPMX20_00906at 954.454 kb on - strand, within MPMX20_00906at 954.520 kb on - strandat 954.525 kb on + strandat 954.533 kb on - strandat 954.613 kb on - strandat 954.637 kb on - strandat 954.647 kb on + strandat 954.647 kb on + strandat 954.655 kb on - strandat 954.655 kb on - strandat 954.655 kb on - strandat 954.655 kb on - strandat 954.711 kb on + strand, within MPMX20_00907at 954.900 kb on - strand, within MPMX20_00907at 954.973 kb on + strand, within MPMX20_00907at 955.010 kb on + strand, within MPMX20_00907at 955.018 kb on - strand, within MPMX20_00907at 955.067 kb on + strand, within MPMX20_00907at 955.075 kb on - strand, within MPMX20_00907at 955.075 kb on - strand, within MPMX20_00907at 955.075 kb on - strand, within MPMX20_00907at 955.089 kb on + strand, within MPMX20_00907at 955.097 kb on - strand, within MPMX20_00907at 955.168 kb on - strand, within MPMX20_00907at 955.220 kb on + strand, within MPMX20_00907at 955.223 kb on - strand, within MPMX20_00907at 955.294 kb on - strand, within MPMX20_00907at 955.351 kb on + strand, within MPMX20_00907at 955.351 kb on + strand, within MPMX20_00907at 955.357 kb on - strand, within MPMX20_00907at 955.382 kb on + strand, within MPMX20_00907at 955.434 kb on + strandat 955.558 kb on + strandat 955.592 kb on + strandat 955.669 kb on - strand, within MPMX20_00908at 955.672 kb on + strand, within MPMX20_00908at 955.830 kb on + strand, within MPMX20_00908at 955.838 kb on - strand, within MPMX20_00908at 955.980 kb on + strand, within MPMX20_00908at 955.987 kb on - strand, within MPMX20_00908at 955.988 kb on - strand, within MPMX20_00908at 956.040 kb on + strand, within MPMX20_00908at 956.067 kb on + strand, within MPMX20_00908at 956.191 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.217 kb on + strand, within MPMX20_00908at 956.220 kb on - strand, within MPMX20_00908at 956.225 kb on - strand, within MPMX20_00908at 956.225 kb on - strand, within MPMX20_00908at 956.250 kb on + strand, within MPMX20_00908at 956.296 kb on + strand, within MPMX20_00908at 956.310 kb on + strand, within MPMX20_00908at 956.313 kb on - strand, within MPMX20_00908at 956.318 kb on - strand, within MPMX20_00908at 956.318 kb on - strand, within MPMX20_00908at 956.385 kb on + strand, within MPMX20_00908at 956.437 kb on - strand, within MPMX20_00908at 956.444 kb on + strand, within MPMX20_00908at 956.452 kb on - strand, within MPMX20_00908

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Per-strain Table

Position Strand Gene LocusTag Fraction Gly-DL-Asp (N)
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953,622 - +3.0
953,629 - +2.3
953,631 + -0.0
953,632 + -0.1
953,654 + +1.1
953,668 - +0.2
953,691 + -0.8
953,706 + -1.0
953,713 + +1.9
953,837 - MPMX20_00906 0.18 +0.5
953,846 + MPMX20_00906 0.19 -1.1
953,851 + MPMX20_00906 0.19 -1.2
953,851 + MPMX20_00906 0.19 -0.7
953,854 - MPMX20_00906 0.20 +1.1
953,859 - MPMX20_00906 0.20 +1.3
953,859 - MPMX20_00906 0.20 -1.8
953,859 - MPMX20_00906 0.20 +0.7
953,886 + MPMX20_00906 0.23 +0.6
953,896 + MPMX20_00906 0.24 -0.5
953,925 - MPMX20_00906 0.27 -1.1
953,970 - MPMX20_00906 0.32 -0.6
954,220 - MPMX20_00906 0.58 -1.3
954,220 - MPMX20_00906 0.58 +0.5
954,220 - MPMX20_00906 0.58 -0.1
954,223 + MPMX20_00906 0.59 -3.1
954,269 - MPMX20_00906 0.64 -0.4
954,320 + MPMX20_00906 0.69 +0.0
954,320 + MPMX20_00906 0.69 -0.5
954,328 - MPMX20_00906 0.70 +1.0
954,390 + MPMX20_00906 0.76 +1.6
954,417 + MPMX20_00906 0.79 -1.2
954,417 + MPMX20_00906 0.79 -0.4
954,427 + MPMX20_00906 0.80 +0.1
954,454 - MPMX20_00906 0.83 -0.3
954,454 - MPMX20_00906 0.83 -1.3
954,520 - -0.3
954,525 + +1.2
954,533 - -1.7
954,613 - -2.6
954,637 - -1.1
954,647 + +0.5
954,647 + -1.1
954,655 - -1.4
954,655 - +1.0
954,655 - +0.4
954,655 - +2.1
954,711 + MPMX20_00907 0.11 -0.4
954,900 - MPMX20_00907 0.33 -0.6
954,973 + MPMX20_00907 0.41 -0.0
955,010 + MPMX20_00907 0.45 -0.0
955,018 - MPMX20_00907 0.46 -1.5
955,067 + MPMX20_00907 0.52 -1.2
955,075 - MPMX20_00907 0.53 -1.0
955,075 - MPMX20_00907 0.53 -0.0
955,075 - MPMX20_00907 0.53 -0.6
955,089 + MPMX20_00907 0.54 -0.3
955,097 - MPMX20_00907 0.55 -0.3
955,168 - MPMX20_00907 0.63 -1.6
955,220 + MPMX20_00907 0.69 +0.3
955,223 - MPMX20_00907 0.70 -1.7
955,294 - MPMX20_00907 0.78 -0.8
955,351 + MPMX20_00907 0.84 +0.4
955,351 + MPMX20_00907 0.84 -0.7
955,357 - MPMX20_00907 0.85 +0.5
955,382 + MPMX20_00907 0.88 -0.7
955,434 + +1.0
955,558 + -1.2
955,592 + -0.7
955,669 - MPMX20_00908 0.11 -2.2
955,672 + MPMX20_00908 0.11 +0.8
955,830 + MPMX20_00908 0.21 -1.4
955,838 - MPMX20_00908 0.21 -1.4
955,980 + MPMX20_00908 0.30 -0.4
955,987 - MPMX20_00908 0.30 +0.5
955,988 - MPMX20_00908 0.31 -0.3
956,040 + MPMX20_00908 0.34 -0.5
956,067 + MPMX20_00908 0.35 +0.7
956,191 + MPMX20_00908 0.43 +0.4
956,217 + MPMX20_00908 0.45 -1.9
956,217 + MPMX20_00908 0.45 -0.6
956,217 + MPMX20_00908 0.45 +0.1
956,220 - MPMX20_00908 0.45 +1.3
956,225 - MPMX20_00908 0.45 +0.3
956,225 - MPMX20_00908 0.45 +0.7
956,250 + MPMX20_00908 0.47 -0.3
956,296 + MPMX20_00908 0.50 -1.5
956,310 + MPMX20_00908 0.51 -0.5
956,313 - MPMX20_00908 0.51 +2.3
956,318 - MPMX20_00908 0.51 +0.5
956,318 - MPMX20_00908 0.51 +0.3
956,385 + MPMX20_00908 0.55 +0.3
956,437 - MPMX20_00908 0.59 -0.4
956,444 + MPMX20_00908 0.59 -1.6
956,452 - MPMX20_00908 0.59 +0.6

Or see this region's nucleotide sequence