Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03852

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
4,055,110	-				-0.6
4,055,110	-				+0.8
4,055,156	-		MPMX20_03851	0.12	-2.5
4,055,179	+		MPMX20_03851	0.15	+0.6
4,055,179	+		MPMX20_03851	0.15	-0.5
4,055,180	+		MPMX20_03851	0.15	+0.0
4,055,187	-		MPMX20_03851	0.16	-0.5
4,055,187	-		MPMX20_03851	0.16	-0.0
4,055,187	-		MPMX20_03851	0.16	-0.0
4,055,244	-		MPMX20_03851	0.24	-1.4
4,055,356	+		MPMX20_03851	0.39	+1.0
4,055,364	-		MPMX20_03851	0.41	+1.3
4,055,474	+		MPMX20_03851	0.56	+0.7
4,055,474	+		MPMX20_03851	0.56	+0.7
4,055,508	+		MPMX20_03851	0.60	-1.8
4,055,520	+		MPMX20_03851	0.62	-1.5
4,055,533	-		MPMX20_03851	0.64	-0.5
4,055,574	+		MPMX20_03851	0.69	+1.0
4,055,582	-		MPMX20_03851	0.70	+0.6
4,055,588	-		MPMX20_03851	0.71	+0.3
4,055,599	-		MPMX20_03851	0.73	-0.7
4,055,604	+		MPMX20_03851	0.73	+0.8
4,055,657	+		MPMX20_03851	0.81	+0.5
4,055,683	+		MPMX20_03851	0.84	-1.3
4,055,696	-		MPMX20_03851	0.86	-0.1
4,055,700	+		MPMX20_03851	0.86	+1.6
4,055,700	+		MPMX20_03851	0.86	-1.1
4,055,700	+		MPMX20_03851	0.86	+0.8
4,055,700	+		MPMX20_03851	0.86	+0.5
4,055,700	+		MPMX20_03851	0.86	-0.5
4,055,700	+		MPMX20_03851	0.86	-0.2
4,055,700	+		MPMX20_03851	0.86	-0.3
4,055,708	-		MPMX20_03851	0.88	-0.5
4,055,708	-		MPMX20_03851	0.88	-0.0
4,055,708	-		MPMX20_03851	0.88	+0.8
4,055,708	-		MPMX20_03851	0.88	+0.7
4,055,748	+				-0.9
4,055,765	-				-1.8
4,055,798	+				-0.3
4,055,800	+				-1.9
4,055,926	-				-0.0
4,055,926	-				+3.2
4,055,979	+				-2.4
4,055,979	+				+0.4
4,055,979	+				+0.1
4,055,979	+				-1.2
4,055,979	+				+0.3
4,056,013	-				+0.3
4,056,075	+				-0.6
4,056,079	+				-3.3
4,056,079	+				-4.4
4,056,085	+				-3.5
4,056,118	+				-2.4
4,056,204	-		MPMX20_03852	0.13	-3.8
4,056,211	+		MPMX20_03852	0.14	+0.2
4,056,211	+		MPMX20_03852	0.14	-2.0
4,056,219	-		MPMX20_03852	0.14	-3.6
4,056,271	+		MPMX20_03852	0.19	-3.6
4,056,278	+		MPMX20_03852	0.19	-1.5
4,056,278	+		MPMX20_03852	0.19	-0.5
4,056,295	+		MPMX20_03852	0.21	-3.5
4,056,301	-		MPMX20_03852	0.21	-2.3
4,056,339	+		MPMX20_03852	0.24	-2.2
4,056,354	+		MPMX20_03852	0.26	-0.3
4,056,354	+		MPMX20_03852	0.26	-3.8
4,056,362	-		MPMX20_03852	0.26	-0.8
4,056,362	-		MPMX20_03852	0.26	-2.5
4,056,377	-		MPMX20_03852	0.28	-2.5
4,056,405	+		MPMX20_03852	0.30	-2.2
4,056,405	+		MPMX20_03852	0.30	-3.0
4,056,512	+		MPMX20_03852	0.39	-2.0
4,056,513	+		MPMX20_03852	0.39	-1.8
4,056,513	+		MPMX20_03852	0.39	-4.0
4,056,513	+		MPMX20_03852	0.39	-3.7
4,056,521	-		MPMX20_03852	0.40	-3.5
4,056,533	+		MPMX20_03852	0.41	-3.3
4,056,536	+		MPMX20_03852	0.41	-1.2
4,056,536	-		MPMX20_03852	0.41	-3.2
4,056,556	+		MPMX20_03852	0.43	-3.3
4,056,564	-		MPMX20_03852	0.43	-2.3
4,056,592	+		MPMX20_03852	0.46	-2.5
4,056,601	+		MPMX20_03852	0.46	-2.8
4,056,615	-		MPMX20_03852	0.48	-3.0
4,056,628	+		MPMX20_03852	0.49	-3.8
4,056,636	-		MPMX20_03852	0.49	-2.6
4,056,711	+		MPMX20_03852	0.56	-1.7
4,056,716	+		MPMX20_03852	0.56	-3.2
4,056,716	+		MPMX20_03852	0.56	-1.9
4,056,724	-		MPMX20_03852	0.57	-3.0
4,056,724	-		MPMX20_03852	0.57	-4.2
4,056,743	-		MPMX20_03852	0.58	-0.6
4,056,770	+		MPMX20_03852	0.61	-1.0
4,056,836	-		MPMX20_03852	0.66	-2.8
4,056,848	+		MPMX20_03852	0.67	-0.3
4,056,858	+		MPMX20_03852	0.68	-1.3
4,056,987	-		MPMX20_03852	0.79	-2.9
4,057,038	+		MPMX20_03852	0.83	-4.4
4,057,046	-		MPMX20_03852	0.84	-3.9
4,057,053	+		MPMX20_03852	0.84	-0.9
4,057,063	+		MPMX20_03852	0.85	-0.0
4,057,063	+		MPMX20_03852	0.85	-2.1
4,057,063	+		MPMX20_03852	0.85	-2.9
4,057,066	-		MPMX20_03852	0.86	-2.6
4,057,066	-		MPMX20_03852	0.86	-1.2
4,057,071	-		MPMX20_03852	0.86	-4.4
4,057,071	-		MPMX20_03852	0.86	-3.8
4,057,071	-		MPMX20_03852	0.86	-2.4
4,057,120	+				-3.3
4,057,162	-				-2.8
4,057,218	+				-1.3
4,057,218	+				+0.5
4,057,218	+				+1.1
4,057,225	-				-1.5
4,057,226	-				-2.4
4,057,226	-				-1.4
4,057,259	+				-0.7
4,057,316	+				+2.5
4,057,342	+				-0.1
4,057,350	-				-1.1
4,057,350	-				-1.2
4,057,359	-				-1.5
4,057,370	+				+0.9
4,057,383	+				-0.1
4,057,391	-				-0.0
4,057,391	-				-2.6
4,057,391	-				-0.8
4,057,391	-				-1.2
4,057,443	+				-1.3
4,057,457	-		MPMX20_03853	0.11	+0.2
4,057,457	-		MPMX20_03853	0.11	-2.8
4,057,462	+		MPMX20_03853	0.11	-1.8
4,057,587	-		MPMX20_03853	0.30	-1.9
4,057,608	+		MPMX20_03853	0.33	-0.6
4,057,611	+		MPMX20_03853	0.34	-0.1
4,057,611	-		MPMX20_03853	0.34	+0.2
4,057,619	-		MPMX20_03853	0.35	-0.7
4,057,800	+		MPMX20_03853	0.63	-0.6
4,057,820	+		MPMX20_03853	0.66	+0.7
4,057,872	+		MPMX20_03853	0.73	-1.7
4,057,872	+		MPMX20_03853	0.73	+0.9
4,057,877	+		MPMX20_03853	0.74	+0.1
4,057,877	+		MPMX20_03853	0.74	-1.9
4,057,880	-		MPMX20_03853	0.75	-0.7
4,057,903	-		MPMX20_03853	0.78	+0.5
4,057,911	+		MPMX20_03853	0.79	+1.5
4,057,937	+		MPMX20_03853	0.83	+0.9
4,057,948	+		MPMX20_03853	0.85	-0.1
4,057,959	+		MPMX20_03853	0.87	-0.8
4,057,994	-				+0.2
4,058,072	-				-0.4
4,058,078	+				+1.0
4,058,090	+				+0.2
4,058,110	+				-1.0
4,058,126	+				-1.3
4,058,228	-		MPMX20_03854	0.15	-0.0