Experiment: D-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02811 and MPMX20_02812 are separated by 49 nucleotides MPMX20_02812 and MPMX20_02813 are separated by 343 nucleotides
MPMX20_02811: MPMX20_02811 - Anaerobic C4-dicarboxylate transporter DcuB, at 2,969,433 to 2,970,776
_02811
MPMX20_02812: MPMX20_02812 - hypothetical protein, at 2,970,826 to 2,971,077
_02812
MPMX20_02813: MPMX20_02813 - hypothetical protein, at 2,971,421 to 2,972,059
_02813
Position (kb)
2970
2971
2972 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2969.881 kb on - strand, within MPMX20_02811 at 2969.915 kb on + strand, within MPMX20_02811 at 2969.964 kb on + strand, within MPMX20_02811 at 2969.976 kb on + strand, within MPMX20_02811 at 2969.976 kb on - strand, within MPMX20_02811 at 2970.007 kb on - strand, within MPMX20_02811 at 2970.024 kb on + strand, within MPMX20_02811 at 2970.034 kb on + strand, within MPMX20_02811 at 2970.035 kb on + strand, within MPMX20_02811 at 2970.071 kb on - strand, within MPMX20_02811 at 2970.083 kb on + strand, within MPMX20_02811 at 2970.190 kb on - strand, within MPMX20_02811 at 2970.193 kb on + strand, within MPMX20_02811 at 2970.193 kb on + strand, within MPMX20_02811 at 2970.196 kb on - strand, within MPMX20_02811 at 2970.201 kb on - strand, within MPMX20_02811 at 2970.201 kb on - strand, within MPMX20_02811 at 2970.201 kb on - strand, within MPMX20_02811 at 2970.201 kb on - strand, within MPMX20_02811 at 2970.201 kb on - strand, within MPMX20_02811 at 2970.317 kb on - strand, within MPMX20_02811 at 2970.349 kb on - strand, within MPMX20_02811 at 2970.384 kb on + strand, within MPMX20_02811 at 2970.423 kb on - strand, within MPMX20_02811 at 2970.424 kb on + strand, within MPMX20_02811 at 2970.425 kb on + strand, within MPMX20_02811 at 2970.432 kb on - strand, within MPMX20_02811 at 2970.438 kb on + strand, within MPMX20_02811 at 2970.641 kb on - strand, within MPMX20_02811 at 2970.648 kb on + strand at 2970.651 kb on - strand at 2970.656 kb on - strand at 2970.656 kb on - strand at 2970.700 kb on + strand at 2970.708 kb on - strand at 2970.736 kb on + strand at 2970.741 kb on + strand at 2970.741 kb on - strand at 2970.770 kb on + strand at 2970.770 kb on + strand at 2970.778 kb on - strand at 2970.778 kb on - strand at 2970.778 kb on - strand at 2970.778 kb on - strand at 2970.780 kb on + strand at 2970.831 kb on - strand at 2970.833 kb on + strand at 2970.885 kb on - strand, within MPMX20_02812 at 2970.988 kb on + strand, within MPMX20_02812 at 2970.996 kb on - strand, within MPMX20_02812 at 2971.048 kb on + strand, within MPMX20_02812 at 2971.058 kb on + strand at 2971.066 kb on - strand at 2971.132 kb on + strand at 2971.229 kb on - strand at 2971.229 kb on - strand at 2971.424 kb on + strand at 2971.424 kb on + strand at 2971.432 kb on - strand at 2971.432 kb on - strand at 2971.432 kb on - strand at 2971.522 kb on + strand, within MPMX20_02813 at 2971.560 kb on + strand, within MPMX20_02813 at 2971.575 kb on + strand, within MPMX20_02813 at 2971.583 kb on - strand, within MPMX20_02813 at 2971.586 kb on + strand, within MPMX20_02813 at 2971.631 kb on + strand, within MPMX20_02813 at 2971.685 kb on + strand, within MPMX20_02813 at 2971.690 kb on + strand, within MPMX20_02813 at 2971.690 kb on + strand, within MPMX20_02813 at 2971.693 kb on - strand, within MPMX20_02813 at 2971.711 kb on - strand, within MPMX20_02813 at 2971.801 kb on + strand, within MPMX20_02813 at 2971.840 kb on - strand, within MPMX20_02813 at 2971.840 kb on - strand, within MPMX20_02813 at 2971.845 kb on - strand, within MPMX20_02813 at 2971.917 kb on - strand, within MPMX20_02813 at 2971.919 kb on + strand, within MPMX20_02813 at 2971.919 kb on + strand, within MPMX20_02813 at 2971.919 kb on + strand, within MPMX20_02813 at 2971.920 kb on - strand, within MPMX20_02813 at 2971.921 kb on - strand, within MPMX20_02813 at 2971.924 kb on + strand, within MPMX20_02813 at 2971.927 kb on - strand, within MPMX20_02813 at 2971.970 kb on + strand, within MPMX20_02813 at 2971.989 kb on + strand, within MPMX20_02813 at 2972.033 kb on - strand at 2972.033 kb on - strand at 2972.045 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Alanine (N) remove 2,969,881 - MPMX20_02811 0.33 +0.7 2,969,915 + MPMX20_02811 0.36 -0.1 2,969,964 + MPMX20_02811 0.40 +0.3 2,969,976 + MPMX20_02811 0.40 -1.4 2,969,976 - MPMX20_02811 0.40 -0.1 2,970,007 - MPMX20_02811 0.43 +0.1 2,970,024 + MPMX20_02811 0.44 -0.9 2,970,034 + MPMX20_02811 0.45 +1.0 2,970,035 + MPMX20_02811 0.45 -0.1 2,970,071 - MPMX20_02811 0.47 +0.1 2,970,083 + MPMX20_02811 0.48 +0.2 2,970,190 - MPMX20_02811 0.56 +0.4 2,970,193 + MPMX20_02811 0.57 -0.9 2,970,193 + MPMX20_02811 0.57 +0.0 2,970,196 - MPMX20_02811 0.57 -0.2 2,970,201 - MPMX20_02811 0.57 -2.9 2,970,201 - MPMX20_02811 0.57 -1.8 2,970,201 - MPMX20_02811 0.57 -1.5 2,970,201 - MPMX20_02811 0.57 -0.2 2,970,201 - MPMX20_02811 0.57 -1.3 2,970,317 - MPMX20_02811 0.66 -0.9 2,970,349 - MPMX20_02811 0.68 +0.4 2,970,384 + MPMX20_02811 0.71 +0.4 2,970,423 - MPMX20_02811 0.74 -2.5 2,970,424 + MPMX20_02811 0.74 +1.3 2,970,425 + MPMX20_02811 0.74 -1.2 2,970,432 - MPMX20_02811 0.74 -0.2 2,970,438 + MPMX20_02811 0.75 +0.6 2,970,641 - MPMX20_02811 0.90 -0.7 2,970,648 + -0.8 2,970,651 - +0.6 2,970,656 - -0.6 2,970,656 - -1.2 2,970,700 + -1.9 2,970,708 - -1.1 2,970,736 + -0.9 2,970,741 + -0.9 2,970,741 - -1.3 2,970,770 + -0.9 2,970,770 + +0.1 2,970,778 - -0.4 2,970,778 - +0.4 2,970,778 - -0.2 2,970,778 - -0.5 2,970,780 + +0.6 2,970,831 - -0.6 2,970,833 + +0.1 2,970,885 - MPMX20_02812 0.23 -1.3 2,970,988 + MPMX20_02812 0.64 -2.4 2,970,996 - MPMX20_02812 0.67 -1.7 2,971,048 + MPMX20_02812 0.88 -1.1 2,971,058 + -0.7 2,971,066 - +0.1 2,971,132 + -0.2 2,971,229 - -2.2 2,971,229 - -2.1 2,971,424 + +0.4 2,971,424 + -2.1 2,971,432 - -0.8 2,971,432 - -0.5 2,971,432 - +0.1 2,971,522 + MPMX20_02813 0.16 +1.1 2,971,560 + MPMX20_02813 0.22 -0.1 2,971,575 + MPMX20_02813 0.24 -1.4 2,971,583 - MPMX20_02813 0.25 +0.3 2,971,586 + MPMX20_02813 0.26 -1.3 2,971,631 + MPMX20_02813 0.33 -1.0 2,971,685 + MPMX20_02813 0.41 +0.7 2,971,690 + MPMX20_02813 0.42 -1.7 2,971,690 + MPMX20_02813 0.42 +1.6 2,971,693 - MPMX20_02813 0.43 -1.5 2,971,711 - MPMX20_02813 0.45 +2.1 2,971,801 + MPMX20_02813 0.59 -0.1 2,971,840 - MPMX20_02813 0.66 -1.3 2,971,840 - MPMX20_02813 0.66 +0.6 2,971,845 - MPMX20_02813 0.66 -1.4 2,971,917 - MPMX20_02813 0.78 -0.4 2,971,919 + MPMX20_02813 0.78 +0.3 2,971,919 + MPMX20_02813 0.78 -0.9 2,971,919 + MPMX20_02813 0.78 +0.3 2,971,920 - MPMX20_02813 0.78 -1.4 2,971,921 - MPMX20_02813 0.78 +0.2 2,971,924 + MPMX20_02813 0.79 -0.3 2,971,927 - MPMX20_02813 0.79 -0.5 2,971,970 + MPMX20_02813 0.86 -2.4 2,971,989 + MPMX20_02813 0.89 +0.1 2,972,033 - +0.1 2,972,033 - -0.6 2,972,045 - +0.6
Or see this region's nucleotide sequence