Experiment: D-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00650 and MPMX20_00651 are separated by 85 nucleotides MPMX20_00651 and MPMX20_00652 overlap by 4 nucleotides MPMX20_00652 and MPMX20_00653 are separated by 148 nucleotides MPMX20_00653 and MPMX20_00654 are separated by 84 nucleotides
MPMX20_00650: MPMX20_00650 - hypothetical protein, at 676,592 to 677,074
_00650
MPMX20_00651: MPMX20_00651 - DNA replication protein DnaC, at 677,160 to 677,897
_00651
MPMX20_00652: MPMX20_00652 - Primosomal protein 1, at 677,894 to 678,439
_00652
MPMX20_00653: MPMX20_00653 - Organic hydroperoxide resistance protein OhrB, at 678,588 to 679,016
_00653
MPMX20_00654: MPMX20_00654 - Organic hydroperoxide resistance transcriptional regulator, at 679,101 to 679,553
_00654
Position (kb) 677
678
679 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 677.004 kb on + strand, within MPMX20_00650 at 677.039 kb on + strand at 677.049 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.121 kb on + strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 677.129 kb on - strand at 678.444 kb on - strand at 678.444 kb on - strand at 678.444 kb on - strand at 678.450 kb on - strand at 678.460 kb on - strand at 678.482 kb on + strand at 678.482 kb on + strand at 678.514 kb on - strand at 678.522 kb on - strand at 678.574 kb on - strand at 678.656 kb on + strand, within MPMX20_00653 at 678.757 kb on - strand, within MPMX20_00653 at 678.847 kb on - strand, within MPMX20_00653 at 678.856 kb on + strand, within MPMX20_00653 at 678.861 kb on - strand, within MPMX20_00653 at 678.866 kb on + strand, within MPMX20_00653 at 678.871 kb on + strand, within MPMX20_00653 at 678.871 kb on + strand, within MPMX20_00653 at 678.874 kb on - strand, within MPMX20_00653 at 678.874 kb on - strand, within MPMX20_00653 at 678.874 kb on - strand, within MPMX20_00653 at 678.879 kb on - strand, within MPMX20_00653 at 678.928 kb on - strand, within MPMX20_00653 at 679.049 kb on + strand at 679.091 kb on + strand at 679.093 kb on + strand at 679.101 kb on - strand at 679.129 kb on + strand at 679.150 kb on - strand, within MPMX20_00654 at 679.165 kb on + strand, within MPMX20_00654 at 679.165 kb on + strand, within MPMX20_00654 at 679.165 kb on + strand, within MPMX20_00654 at 679.171 kb on - strand, within MPMX20_00654 at 679.173 kb on - strand, within MPMX20_00654 at 679.173 kb on - strand, within MPMX20_00654 at 679.244 kb on + strand, within MPMX20_00654 at 679.244 kb on + strand, within MPMX20_00654 at 679.250 kb on + strand, within MPMX20_00654 at 679.252 kb on - strand, within MPMX20_00654 at 679.252 kb on - strand, within MPMX20_00654 at 679.320 kb on - strand, within MPMX20_00654 at 679.373 kb on + strand, within MPMX20_00654 at 679.381 kb on - strand, within MPMX20_00654 at 679.381 kb on - strand, within MPMX20_00654 at 679.393 kb on + strand, within MPMX20_00654
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (N) remove 677,004 + MPMX20_00650 0.85 -2.0 677,039 + -2.8 677,049 + -0.4 677,121 + -1.3 677,121 + -0.6 677,121 + -0.7 677,121 + -2.4 677,121 + -0.9 677,121 + -0.7 677,121 + -0.9 677,121 + -0.4 677,121 + -1.0 677,121 + -1.2 677,121 + +0.5 677,121 + -0.8 677,121 + -1.9 677,121 + -1.2 677,121 + -1.5 677,121 + +0.4 677,121 + -0.1 677,121 + +0.0 677,129 - -1.3 677,129 - -2.0 677,129 - -0.3 677,129 - +1.1 677,129 - -1.7 677,129 - +1.3 677,129 - +0.3 677,129 - -2.4 678,444 - -0.9 678,444 - +1.6 678,444 - -0.1 678,450 - +0.7 678,460 - -0.1 678,482 + -0.1 678,482 + -1.3 678,514 - -0.3 678,522 - +0.1 678,574 - -1.3 678,656 + MPMX20_00653 0.16 -0.1 678,757 - MPMX20_00653 0.39 +0.3 678,847 - MPMX20_00653 0.60 +1.2 678,856 + MPMX20_00653 0.62 +2.5 678,861 - MPMX20_00653 0.64 -0.4 678,866 + MPMX20_00653 0.65 -1.0 678,871 + MPMX20_00653 0.66 -0.5 678,871 + MPMX20_00653 0.66 -0.2 678,874 - MPMX20_00653 0.67 -1.4 678,874 - MPMX20_00653 0.67 -0.1 678,874 - MPMX20_00653 0.67 -1.4 678,879 - MPMX20_00653 0.68 +0.5 678,928 - MPMX20_00653 0.79 -0.4 679,049 + +1.6 679,091 + +0.1 679,093 + -0.4 679,101 - -0.8 679,129 + -2.7 679,150 - MPMX20_00654 0.11 +0.9 679,165 + MPMX20_00654 0.14 +0.8 679,165 + MPMX20_00654 0.14 -1.6 679,165 + MPMX20_00654 0.14 -1.4 679,171 - MPMX20_00654 0.15 -2.0 679,173 - MPMX20_00654 0.16 -0.8 679,173 - MPMX20_00654 0.16 -0.3 679,244 + MPMX20_00654 0.32 -1.8 679,244 + MPMX20_00654 0.32 +2.2 679,250 + MPMX20_00654 0.33 -0.3 679,252 - MPMX20_00654 0.33 -0.5 679,252 - MPMX20_00654 0.33 -0.8 679,320 - MPMX20_00654 0.48 -0.1 679,373 + MPMX20_00654 0.60 +0.5 679,381 - MPMX20_00654 0.62 -0.7 679,381 - MPMX20_00654 0.62 -1.4 679,393 + MPMX20_00654 0.64 -0.8
Or see this region's nucleotide sequence