Experiment: L-tyrosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04102 and MPMX20_04103 are separated by 13 nucleotides MPMX20_04103 and MPMX20_04104 are separated by 14 nucleotides MPMX20_04104 and MPMX20_04105 overlap by 4 nucleotides
MPMX20_04102: MPMX20_04102 - Inner membrane protein YrbG, at 4,296,414 to 4,297,391
_04102
MPMX20_04103: MPMX20_04103 - Arabinose 5-phosphate isomerase KdsD, at 4,297,405 to 4,298,391
_04103
MPMX20_04104: MPMX20_04104 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC, at 4,298,406 to 4,298,972
_04104
MPMX20_04105: MPMX20_04105 - Lipopolysaccharide export system protein LptC, at 4,298,969 to 4,299,544
_04105
Position (kb)
4297
4298
4299 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4296.458 kb on + strand at 4296.458 kb on + strand at 4296.461 kb on + strand at 4296.461 kb on + strand at 4296.469 kb on - strand at 4296.469 kb on - strand at 4296.469 kb on - strand at 4296.469 kb on - strand at 4296.490 kb on + strand at 4296.490 kb on + strand at 4296.498 kb on - strand at 4296.503 kb on - strand at 4296.519 kb on - strand, within MPMX20_04102 at 4296.540 kb on + strand, within MPMX20_04102 at 4296.543 kb on - strand, within MPMX20_04102 at 4296.614 kb on - strand, within MPMX20_04102 at 4296.636 kb on + strand, within MPMX20_04102 at 4296.656 kb on - strand, within MPMX20_04102 at 4296.664 kb on + strand, within MPMX20_04102 at 4296.671 kb on - strand, within MPMX20_04102 at 4296.672 kb on - strand, within MPMX20_04102 at 4296.686 kb on - strand, within MPMX20_04102 at 4296.750 kb on - strand, within MPMX20_04102 at 4296.757 kb on - strand, within MPMX20_04102 at 4296.793 kb on - strand, within MPMX20_04102 at 4296.881 kb on - strand, within MPMX20_04102 at 4296.881 kb on - strand, within MPMX20_04102 at 4297.008 kb on - strand, within MPMX20_04102 at 4297.050 kb on - strand, within MPMX20_04102 at 4297.088 kb on + strand, within MPMX20_04102 at 4297.144 kb on - strand, within MPMX20_04102 at 4297.184 kb on - strand, within MPMX20_04102 at 4297.185 kb on - strand, within MPMX20_04102 at 4297.196 kb on + strand, within MPMX20_04102 at 4297.204 kb on - strand, within MPMX20_04102 at 4297.218 kb on + strand, within MPMX20_04102 at 4297.277 kb on + strand, within MPMX20_04102 at 4297.312 kb on + strand at 4297.323 kb on + strand at 4297.356 kb on + strand at 4297.361 kb on + strand at 4297.369 kb on - strand at 4297.385 kb on - strand at 4297.467 kb on - strand at 4297.474 kb on + strand at 4297.480 kb on + strand at 4297.488 kb on - strand at 4297.490 kb on + strand at 4297.498 kb on - strand at 4297.580 kb on + strand, within MPMX20_04103 at 4297.580 kb on + strand, within MPMX20_04103 at 4297.713 kb on + strand, within MPMX20_04103 at 4297.713 kb on + strand, within MPMX20_04103 at 4297.749 kb on + strand, within MPMX20_04103 at 4297.829 kb on + strand, within MPMX20_04103 at 4297.841 kb on + strand, within MPMX20_04103 at 4297.855 kb on + strand, within MPMX20_04103 at 4297.908 kb on + strand, within MPMX20_04103 at 4297.916 kb on - strand, within MPMX20_04103 at 4297.916 kb on - strand, within MPMX20_04103 at 4297.952 kb on + strand, within MPMX20_04103 at 4298.008 kb on - strand, within MPMX20_04103 at 4298.014 kb on - strand, within MPMX20_04103 at 4298.019 kb on + strand, within MPMX20_04103 at 4298.037 kb on - strand, within MPMX20_04103 at 4298.039 kb on + strand, within MPMX20_04103 at 4298.049 kb on - strand, within MPMX20_04103 at 4298.198 kb on + strand, within MPMX20_04103 at 4298.198 kb on + strand, within MPMX20_04103 at 4298.217 kb on + strand, within MPMX20_04103 at 4298.217 kb on + strand, within MPMX20_04103 at 4298.245 kb on - strand, within MPMX20_04103 at 4298.262 kb on + strand, within MPMX20_04103 at 4298.320 kb on - strand at 4298.348 kb on + strand at 4298.380 kb on + strand at 4298.380 kb on + strand at 4298.380 kb on + strand at 4298.386 kb on + strand at 4298.396 kb on + strand at 4298.396 kb on + strand at 4298.396 kb on + strand at 4298.437 kb on + strand at 4298.437 kb on + strand at 4298.452 kb on + strand at 4298.459 kb on + strand at 4298.494 kb on + strand, within MPMX20_04104 at 4298.605 kb on + strand, within MPMX20_04104 at 4298.680 kb on + strand, within MPMX20_04104 at 4298.819 kb on + strand, within MPMX20_04104 at 4298.821 kb on + strand, within MPMX20_04104 at 4298.869 kb on + strand, within MPMX20_04104 at 4298.951 kb on + strand at 4299.336 kb on + strand, within MPMX20_04105 at 4299.373 kb on + strand, within MPMX20_04105 at 4299.373 kb on + strand, within MPMX20_04105
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine (N) remove 4,296,458 + -0.1 4,296,458 + -0.5 4,296,461 + -0.5 4,296,461 + -0.2 4,296,469 - -1.0 4,296,469 - -0.4 4,296,469 - -0.2 4,296,469 - -0.4 4,296,490 + -0.1 4,296,490 + -0.6 4,296,498 - -0.6 4,296,503 - +1.5 4,296,519 - MPMX20_04102 0.11 +0.6 4,296,540 + MPMX20_04102 0.13 +0.5 4,296,543 - MPMX20_04102 0.13 +0.0 4,296,614 - MPMX20_04102 0.20 -0.6 4,296,636 + MPMX20_04102 0.23 -0.4 4,296,656 - MPMX20_04102 0.25 +0.4 4,296,664 + MPMX20_04102 0.26 +0.0 4,296,671 - MPMX20_04102 0.26 +0.1 4,296,672 - MPMX20_04102 0.26 -0.4 4,296,686 - MPMX20_04102 0.28 +0.1 4,296,750 - MPMX20_04102 0.34 +0.7 4,296,757 - MPMX20_04102 0.35 -1.1 4,296,793 - MPMX20_04102 0.39 -1.3 4,296,881 - MPMX20_04102 0.48 +0.9 4,296,881 - MPMX20_04102 0.48 +0.8 4,297,008 - MPMX20_04102 0.61 +0.4 4,297,050 - MPMX20_04102 0.65 +0.6 4,297,088 + MPMX20_04102 0.69 -0.2 4,297,144 - MPMX20_04102 0.75 +0.3 4,297,184 - MPMX20_04102 0.79 -1.1 4,297,185 - MPMX20_04102 0.79 -1.8 4,297,196 + MPMX20_04102 0.80 +0.6 4,297,204 - MPMX20_04102 0.81 -0.4 4,297,218 + MPMX20_04102 0.82 +0.9 4,297,277 + MPMX20_04102 0.88 +0.4 4,297,312 + -1.1 4,297,323 + -0.4 4,297,356 + +1.9 4,297,361 + +0.4 4,297,369 - -1.1 4,297,385 - +0.9 4,297,467 - +0.4 4,297,474 + -0.8 4,297,480 + +3.6 4,297,488 - -1.4 4,297,490 + -0.2 4,297,498 - -0.7 4,297,580 + MPMX20_04103 0.18 +0.2 4,297,580 + MPMX20_04103 0.18 -2.0 4,297,713 + MPMX20_04103 0.31 +1.5 4,297,713 + MPMX20_04103 0.31 -0.7 4,297,749 + MPMX20_04103 0.35 +0.6 4,297,829 + MPMX20_04103 0.43 +0.1 4,297,841 + MPMX20_04103 0.44 +1.0 4,297,855 + MPMX20_04103 0.46 -0.3 4,297,908 + MPMX20_04103 0.51 -0.0 4,297,916 - MPMX20_04103 0.52 -1.7 4,297,916 - MPMX20_04103 0.52 +0.4 4,297,952 + MPMX20_04103 0.55 -1.5 4,298,008 - MPMX20_04103 0.61 -0.1 4,298,014 - MPMX20_04103 0.62 -0.5 4,298,019 + MPMX20_04103 0.62 +0.6 4,298,037 - MPMX20_04103 0.64 +0.9 4,298,039 + MPMX20_04103 0.64 +2.4 4,298,049 - MPMX20_04103 0.65 +3.8 4,298,198 + MPMX20_04103 0.80 +1.3 4,298,198 + MPMX20_04103 0.80 +0.0 4,298,217 + MPMX20_04103 0.82 +2.2 4,298,217 + MPMX20_04103 0.82 -0.3 4,298,245 - MPMX20_04103 0.85 +1.0 4,298,262 + MPMX20_04103 0.87 +0.2 4,298,320 - +0.5 4,298,348 + +0.1 4,298,380 + -1.6 4,298,380 + +0.4 4,298,380 + +2.1 4,298,386 + +0.3 4,298,396 + -1.8 4,298,396 + +2.4 4,298,396 + -0.5 4,298,437 + +0.2 4,298,437 + +0.6 4,298,452 + +0.8 4,298,459 + +2.4 4,298,494 + MPMX20_04104 0.16 -0.7 4,298,605 + MPMX20_04104 0.35 +1.4 4,298,680 + MPMX20_04104 0.48 +0.2 4,298,819 + MPMX20_04104 0.73 +1.0 4,298,821 + MPMX20_04104 0.73 +0.2 4,298,869 + MPMX20_04104 0.82 +0.7 4,298,951 + +0.4 4,299,336 + MPMX20_04105 0.64 +0.8 4,299,373 + MPMX20_04105 0.70 +0.8 4,299,373 + MPMX20_04105 0.70 +0.9
Or see this region's nucleotide sequence