Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01709

Experiment: L-tyrosine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01708 and MPMX20_01709 are separated by 223 nucleotidesMPMX20_01709 and MPMX20_01710 are separated by 298 nucleotidesMPMX20_01710 and MPMX20_01711 are separated by 147 nucleotides MPMX20_01708: MPMX20_01708 - Deferrochelatase/peroxidase EfeB, at 1,807,134 to 1,808,417 _01708 MPMX20_01709: MPMX20_01709 - Protein PhoH, at 1,808,641 to 1,809,705 _01709 MPMX20_01710: MPMX20_01710 - tRNA-Ser, at 1,810,004 to 1,810,091 _01710 MPMX20_01711: MPMX20_01711 - putative hydrolase YcaC, at 1,810,239 to 1,810,916 _01711 Position (kb) 1808 1809 1810Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1807.656 kb on + strand, within MPMX20_01708at 1807.685 kb on + strand, within MPMX20_01708at 1807.752 kb on - strand, within MPMX20_01708at 1807.752 kb on - strand, within MPMX20_01708at 1807.805 kb on + strand, within MPMX20_01708at 1807.820 kb on - strand, within MPMX20_01708at 1807.870 kb on + strand, within MPMX20_01708at 1807.904 kb on + strand, within MPMX20_01708at 1807.914 kb on + strand, within MPMX20_01708at 1807.928 kb on + strand, within MPMX20_01708at 1807.948 kb on - strand, within MPMX20_01708at 1808.011 kb on - strand, within MPMX20_01708at 1808.040 kb on - strand, within MPMX20_01708at 1808.085 kb on + strand, within MPMX20_01708at 1808.126 kb on - strand, within MPMX20_01708at 1808.162 kb on + strand, within MPMX20_01708at 1808.190 kb on + strand, within MPMX20_01708at 1808.218 kb on + strand, within MPMX20_01708at 1808.266 kb on + strand, within MPMX20_01708at 1808.289 kb on + strandat 1808.297 kb on - strandat 1808.384 kb on + strandat 1808.392 kb on - strandat 1808.392 kb on - strandat 1808.514 kb on - strandat 1808.525 kb on + strandat 1808.525 kb on + strandat 1808.525 kb on + strandat 1808.525 kb on + strandat 1808.533 kb on - strandat 1808.533 kb on - strandat 1808.571 kb on + strandat 1808.579 kb on - strandat 1808.579 kb on - strandat 1808.579 kb on - strandat 1808.589 kb on - strandat 1808.594 kb on - strandat 1808.594 kb on - strandat 1808.633 kb on - strandat 1808.654 kb on + strandat 1808.662 kb on - strandat 1808.662 kb on - strandat 1808.662 kb on - strandat 1808.662 kb on - strandat 1808.665 kb on + strandat 1808.665 kb on + strandat 1808.698 kb on + strandat 1808.706 kb on - strandat 1808.706 kb on - strandat 1808.706 kb on - strandat 1808.778 kb on - strand, within MPMX20_01709at 1808.836 kb on + strand, within MPMX20_01709at 1808.843 kb on + strand, within MPMX20_01709at 1808.859 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.987 kb on + strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1808.995 kb on - strand, within MPMX20_01709at 1809.025 kb on + strand, within MPMX20_01709at 1809.030 kb on + strand, within MPMX20_01709at 1809.057 kb on + strand, within MPMX20_01709at 1809.058 kb on + strand, within MPMX20_01709at 1809.058 kb on + strand, within MPMX20_01709at 1809.066 kb on - strand, within MPMX20_01709at 1809.066 kb on - strand, within MPMX20_01709at 1809.096 kb on + strand, within MPMX20_01709at 1809.111 kb on - strand, within MPMX20_01709at 1809.122 kb on - strand, within MPMX20_01709at 1809.139 kb on - strand, within MPMX20_01709at 1809.241 kb on - strand, within MPMX20_01709at 1809.273 kb on + strand, within MPMX20_01709at 1809.318 kb on + strand, within MPMX20_01709at 1809.326 kb on - strand, within MPMX20_01709at 1809.326 kb on - strand, within MPMX20_01709at 1809.326 kb on - strand, within MPMX20_01709at 1809.326 kb on - strand, within MPMX20_01709at 1809.337 kb on - strand, within MPMX20_01709at 1809.337 kb on - strand, within MPMX20_01709at 1809.337 kb on - strand, within MPMX20_01709at 1809.337 kb on - strand, within MPMX20_01709at 1809.350 kb on - strand, within MPMX20_01709at 1809.362 kb on + strand, within MPMX20_01709at 1809.369 kb on + strand, within MPMX20_01709at 1809.372 kb on + strand, within MPMX20_01709at 1809.372 kb on + strand, within MPMX20_01709at 1809.375 kb on - strand, within MPMX20_01709at 1809.407 kb on - strand, within MPMX20_01709at 1809.466 kb on - strand, within MPMX20_01709at 1809.548 kb on + strand, within MPMX20_01709at 1809.556 kb on - strand, within MPMX20_01709at 1809.556 kb on - strand, within MPMX20_01709at 1809.574 kb on + strand, within MPMX20_01709at 1809.574 kb on + strand, within MPMX20_01709at 1809.589 kb on - strand, within MPMX20_01709at 1809.594 kb on - strand, within MPMX20_01709at 1809.619 kb on + strandat 1809.670 kb on + strandat 1809.686 kb on + strandat 1809.699 kb on + strandat 1810.135 kb on + strandat 1810.140 kb on + strandat 1810.143 kb on - strandat 1810.231 kb on - strandat 1810.250 kb on + strandat 1810.288 kb on + strandat 1810.288 kb on - strandat 1810.288 kb on - strandat 1810.288 kb on - strandat 1810.346 kb on - strand, within MPMX20_01711at 1810.425 kb on + strand, within MPMX20_01711at 1810.425 kb on + strand, within MPMX20_01711at 1810.425 kb on + strand, within MPMX20_01711at 1810.425 kb on + strand, within MPMX20_01711at 1810.433 kb on - strand, within MPMX20_01711at 1810.433 kb on - strand, within MPMX20_01711at 1810.433 kb on - strand, within MPMX20_01711at 1810.433 kb on - strand, within MPMX20_01711at 1810.440 kb on + strand, within MPMX20_01711at 1810.452 kb on + strand, within MPMX20_01711at 1810.504 kb on + strand, within MPMX20_01711at 1810.504 kb on + strand, within MPMX20_01711at 1810.510 kb on - strand, within MPMX20_01711at 1810.510 kb on - strand, within MPMX20_01711at 1810.512 kb on - strand, within MPMX20_01711at 1810.512 kb on - strand, within MPMX20_01711at 1810.531 kb on - strand, within MPMX20_01711at 1810.580 kb on - strand, within MPMX20_01711at 1810.624 kb on + strand, within MPMX20_01711at 1810.678 kb on + strand, within MPMX20_01711

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Per-strain Table

Position Strand Gene LocusTag Fraction L-tyrosine (N)
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1,807,656 + MPMX20_01708 0.41 -0.1
1,807,685 + MPMX20_01708 0.43 +0.0
1,807,752 - MPMX20_01708 0.48 +0.0
1,807,752 - MPMX20_01708 0.48 -0.1
1,807,805 + MPMX20_01708 0.52 +0.4
1,807,820 - MPMX20_01708 0.53 -0.9
1,807,870 + MPMX20_01708 0.57 -0.3
1,807,904 + MPMX20_01708 0.60 -0.4
1,807,914 + MPMX20_01708 0.61 -1.5
1,807,928 + MPMX20_01708 0.62 -0.2
1,807,948 - MPMX20_01708 0.63 +0.2
1,808,011 - MPMX20_01708 0.68 +0.5
1,808,040 - MPMX20_01708 0.71 -0.3
1,808,085 + MPMX20_01708 0.74 +1.1
1,808,126 - MPMX20_01708 0.77 -1.2
1,808,162 + MPMX20_01708 0.80 -1.0
1,808,190 + MPMX20_01708 0.82 -0.9
1,808,218 + MPMX20_01708 0.84 +0.2
1,808,266 + MPMX20_01708 0.88 +0.0
1,808,289 + -0.9
1,808,297 - +0.0
1,808,384 + +0.1
1,808,392 - -0.0
1,808,392 - -2.4
1,808,514 - -0.2
1,808,525 + +0.1
1,808,525 + -1.1
1,808,525 + -0.3
1,808,525 + +0.2
1,808,533 - -0.7
1,808,533 - -0.5
1,808,571 + -1.4
1,808,579 - -1.1
1,808,579 - -1.4
1,808,579 - -0.3
1,808,589 - -0.3
1,808,594 - -0.2
1,808,594 - -2.4
1,808,633 - -0.5
1,808,654 + -0.8
1,808,662 - -2.4
1,808,662 - -1.2
1,808,662 - -0.3
1,808,662 - -1.5
1,808,665 + -1.3
1,808,665 + -2.0
1,808,698 + +1.2
1,808,706 - -1.7
1,808,706 - -1.0
1,808,706 - -2.4
1,808,778 - MPMX20_01709 0.13 +0.2
1,808,836 + MPMX20_01709 0.18 -0.8
1,808,843 + MPMX20_01709 0.19 +0.4
1,808,859 + MPMX20_01709 0.20 -0.8
1,808,987 + MPMX20_01709 0.32 +0.7
1,808,987 + MPMX20_01709 0.32 -0.1
1,808,987 + MPMX20_01709 0.32 -1.3
1,808,987 + MPMX20_01709 0.32 -0.3
1,808,987 + MPMX20_01709 0.32 -0.2
1,808,987 + MPMX20_01709 0.32 -0.6
1,808,987 + MPMX20_01709 0.32 -0.9
1,808,987 + MPMX20_01709 0.32 -0.8
1,808,987 + MPMX20_01709 0.32 -2.3
1,808,987 + MPMX20_01709 0.32 +0.8
1,808,987 + MPMX20_01709 0.32 +0.8
1,808,987 + MPMX20_01709 0.32 -3.0
1,808,987 + MPMX20_01709 0.32 +0.0
1,808,995 - MPMX20_01709 0.33 -1.8
1,808,995 - MPMX20_01709 0.33 +0.1
1,808,995 - MPMX20_01709 0.33 +0.0
1,808,995 - MPMX20_01709 0.33 -1.0
1,808,995 - MPMX20_01709 0.33 -1.5
1,808,995 - MPMX20_01709 0.33 -1.4
1,808,995 - MPMX20_01709 0.33 -2.9
1,808,995 - MPMX20_01709 0.33 -0.2
1,809,025 + MPMX20_01709 0.36 -0.6
1,809,030 + MPMX20_01709 0.37 -0.8
1,809,057 + MPMX20_01709 0.39 -0.3
1,809,058 + MPMX20_01709 0.39 -2.4
1,809,058 + MPMX20_01709 0.39 -1.1
1,809,066 - MPMX20_01709 0.40 -0.7
1,809,066 - MPMX20_01709 0.40 -0.8
1,809,096 + MPMX20_01709 0.43 -1.9
1,809,111 - MPMX20_01709 0.44 -2.3
1,809,122 - MPMX20_01709 0.45 -0.8
1,809,139 - MPMX20_01709 0.47 -1.3
1,809,241 - MPMX20_01709 0.56 -0.3
1,809,273 + MPMX20_01709 0.59 -1.1
1,809,318 + MPMX20_01709 0.64 -1.2
1,809,326 - MPMX20_01709 0.64 -2.6
1,809,326 - MPMX20_01709 0.64 -2.5
1,809,326 - MPMX20_01709 0.64 -1.0
1,809,326 - MPMX20_01709 0.64 -2.1
1,809,337 - MPMX20_01709 0.65 -1.8
1,809,337 - MPMX20_01709 0.65 -1.0
1,809,337 - MPMX20_01709 0.65 -0.3
1,809,337 - MPMX20_01709 0.65 -0.5
1,809,350 - MPMX20_01709 0.67 -1.1
1,809,362 + MPMX20_01709 0.68 +0.8
1,809,369 + MPMX20_01709 0.68 -1.7
1,809,372 + MPMX20_01709 0.69 +0.3
1,809,372 + MPMX20_01709 0.69 -0.8
1,809,375 - MPMX20_01709 0.69 -0.7
1,809,407 - MPMX20_01709 0.72 -1.4
1,809,466 - MPMX20_01709 0.77 -2.1
1,809,548 + MPMX20_01709 0.85 -1.4
1,809,556 - MPMX20_01709 0.86 -1.0
1,809,556 - MPMX20_01709 0.86 +0.0
1,809,574 + MPMX20_01709 0.88 -0.9
1,809,574 + MPMX20_01709 0.88 -2.0
1,809,589 - MPMX20_01709 0.89 -3.1
1,809,594 - MPMX20_01709 0.89 -0.7
1,809,619 + -0.7
1,809,670 + -0.8
1,809,686 + +0.8
1,809,699 + +0.2
1,810,135 + -0.4
1,810,140 + +0.6
1,810,143 - +0.0
1,810,231 - -0.5
1,810,250 + -0.8
1,810,288 + -1.0
1,810,288 - -0.4
1,810,288 - -1.5
1,810,288 - -0.5
1,810,346 - MPMX20_01711 0.16 -0.8
1,810,425 + MPMX20_01711 0.27 +0.2
1,810,425 + MPMX20_01711 0.27 -1.2
1,810,425 + MPMX20_01711 0.27 +0.4
1,810,425 + MPMX20_01711 0.27 -1.1
1,810,433 - MPMX20_01711 0.29 +0.8
1,810,433 - MPMX20_01711 0.29 -0.1
1,810,433 - MPMX20_01711 0.29 -0.4
1,810,433 - MPMX20_01711 0.29 -0.5
1,810,440 + MPMX20_01711 0.30 -0.3
1,810,452 + MPMX20_01711 0.31 +2.6
1,810,504 + MPMX20_01711 0.39 -0.8
1,810,504 + MPMX20_01711 0.39 -1.0
1,810,510 - MPMX20_01711 0.40 +0.5
1,810,510 - MPMX20_01711 0.40 -0.8
1,810,512 - MPMX20_01711 0.40 -0.6
1,810,512 - MPMX20_01711 0.40 -1.4
1,810,531 - MPMX20_01711 0.43 -0.3
1,810,580 - MPMX20_01711 0.50 +0.7
1,810,624 + MPMX20_01711 0.57 -1.1
1,810,678 + MPMX20_01711 0.65 -0.1

Or see this region's nucleotide sequence