Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04549

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_04547 and MPMX20_04548 are separated by 111 nucleotidesMPMX20_04548 and MPMX20_04549 are separated by 33 nucleotidesMPMX20_04549 and MPMX20_04550 are separated by 73 nucleotidesMPMX20_04550 and MPMX20_04551 are separated by 109 nucleotides MPMX20_04547: MPMX20_04547 - hypothetical protein, at 4,760,050 to 4,760,646 _04547 MPMX20_04548: MPMX20_04548 - Triosephosphate isomerase, at 4,760,758 to 4,761,525 _04548 MPMX20_04549: MPMX20_04549 - hypothetical protein, at 4,761,559 to 4,762,863 _04549 MPMX20_04550: MPMX20_04550 - CDP-diacylglycerol pyrophosphatase, at 4,762,937 to 4,763,680 _04550 MPMX20_04551: MPMX20_04551 - Sulfate-binding protein, at 4,763,790 to 4,764,779 _04551 Position (kb) 4761 4762 4763Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4760.712 kb on + strandat 4761.500 kb on + strandat 4761.630 kb on + strandat 4761.630 kb on + strandat 4761.630 kb on + strandat 4761.655 kb on - strandat 4761.700 kb on + strand, within MPMX20_04549at 4761.813 kb on + strand, within MPMX20_04549at 4761.813 kb on - strand, within MPMX20_04549at 4761.815 kb on + strand, within MPMX20_04549at 4761.880 kb on + strand, within MPMX20_04549at 4762.098 kb on + strand, within MPMX20_04549at 4762.291 kb on - strand, within MPMX20_04549at 4762.402 kb on - strand, within MPMX20_04549at 4762.422 kb on + strand, within MPMX20_04549at 4762.474 kb on - strand, within MPMX20_04549at 4762.546 kb on + strand, within MPMX20_04549at 4762.546 kb on + strand, within MPMX20_04549at 4762.546 kb on + strand, within MPMX20_04549at 4762.551 kb on + strand, within MPMX20_04549at 4762.559 kb on - strand, within MPMX20_04549at 4762.569 kb on - strand, within MPMX20_04549at 4762.619 kb on - strand, within MPMX20_04549at 4762.634 kb on + strand, within MPMX20_04549at 4762.671 kb on + strand, within MPMX20_04549at 4762.679 kb on - strand, within MPMX20_04549at 4762.679 kb on - strand, within MPMX20_04549at 4762.700 kb on - strand, within MPMX20_04549at 4762.740 kb on + strandat 4762.774 kb on - strandat 4762.853 kb on - strandat 4762.853 kb on - strandat 4762.853 kb on - strandat 4762.899 kb on + strandat 4763.049 kb on + strand, within MPMX20_04550at 4763.128 kb on + strand, within MPMX20_04550at 4763.205 kb on + strand, within MPMX20_04550at 4763.206 kb on - strand, within MPMX20_04550at 4763.226 kb on + strand, within MPMX20_04550at 4763.226 kb on + strand, within MPMX20_04550at 4763.226 kb on + strand, within MPMX20_04550at 4763.226 kb on + strand, within MPMX20_04550at 4763.234 kb on - strand, within MPMX20_04550at 4763.234 kb on - strand, within MPMX20_04550at 4763.234 kb on - strand, within MPMX20_04550at 4763.257 kb on + strand, within MPMX20_04550at 4763.298 kb on + strand, within MPMX20_04550at 4763.298 kb on + strand, within MPMX20_04550at 4763.304 kb on + strand, within MPMX20_04550at 4763.305 kb on + strand, within MPMX20_04550at 4763.306 kb on - strand, within MPMX20_04550at 4763.313 kb on - strand, within MPMX20_04550at 4763.330 kb on + strand, within MPMX20_04550at 4763.330 kb on + strand, within MPMX20_04550at 4763.330 kb on + strand, within MPMX20_04550at 4763.330 kb on + strand, within MPMX20_04550at 4763.338 kb on + strand, within MPMX20_04550at 4763.338 kb on - strand, within MPMX20_04550at 4763.338 kb on - strand, within MPMX20_04550at 4763.514 kb on + strand, within MPMX20_04550at 4763.522 kb on - strand, within MPMX20_04550at 4763.524 kb on + strand, within MPMX20_04550at 4763.541 kb on - strand, within MPMX20_04550at 4763.596 kb on - strand, within MPMX20_04550at 4763.629 kb on - strandat 4763.720 kb on - strandat 4763.767 kb on + strandat 4763.796 kb on - strandat 4763.815 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
remove
4,760,712 + -0.5
4,761,500 + -0.8
4,761,630 + -0.7
4,761,630 + +1.8
4,761,630 + -0.9
4,761,655 - +1.9
4,761,700 + MPMX20_04549 0.11 -0.8
4,761,813 + MPMX20_04549 0.19 -1.1
4,761,813 - MPMX20_04549 0.19 -1.4
4,761,815 + MPMX20_04549 0.20 -2.1
4,761,880 + MPMX20_04549 0.25 -0.6
4,762,098 + MPMX20_04549 0.41 +0.2
4,762,291 - MPMX20_04549 0.56 -0.1
4,762,402 - MPMX20_04549 0.65 +0.6
4,762,422 + MPMX20_04549 0.66 -0.6
4,762,474 - MPMX20_04549 0.70 +0.7
4,762,546 + MPMX20_04549 0.76 -1.6
4,762,546 + MPMX20_04549 0.76 +0.8
4,762,546 + MPMX20_04549 0.76 +0.9
4,762,551 + MPMX20_04549 0.76 -0.7
4,762,559 - MPMX20_04549 0.77 +0.4
4,762,569 - MPMX20_04549 0.77 -0.1
4,762,619 - MPMX20_04549 0.81 -0.5
4,762,634 + MPMX20_04549 0.82 -0.4
4,762,671 + MPMX20_04549 0.85 +0.4
4,762,679 - MPMX20_04549 0.86 +0.2
4,762,679 - MPMX20_04549 0.86 -0.3
4,762,700 - MPMX20_04549 0.87 -2.2
4,762,740 + +2.0
4,762,774 - -0.3
4,762,853 - -0.9
4,762,853 - -0.5
4,762,853 - +1.1
4,762,899 + -2.3
4,763,049 + MPMX20_04550 0.15 -0.6
4,763,128 + MPMX20_04550 0.26 -0.6
4,763,205 + MPMX20_04550 0.36 -0.8
4,763,206 - MPMX20_04550 0.36 -0.3
4,763,226 + MPMX20_04550 0.39 -0.4
4,763,226 + MPMX20_04550 0.39 -0.9
4,763,226 + MPMX20_04550 0.39 -1.8
4,763,226 + MPMX20_04550 0.39 +1.1
4,763,234 - MPMX20_04550 0.40 -0.4
4,763,234 - MPMX20_04550 0.40 +0.0
4,763,234 - MPMX20_04550 0.40 -0.6
4,763,257 + MPMX20_04550 0.43 -1.9
4,763,298 + MPMX20_04550 0.49 -1.5
4,763,298 + MPMX20_04550 0.49 -2.2
4,763,304 + MPMX20_04550 0.49 +0.1
4,763,305 + MPMX20_04550 0.49 -0.5
4,763,306 - MPMX20_04550 0.50 -0.6
4,763,313 - MPMX20_04550 0.51 -0.0
4,763,330 + MPMX20_04550 0.53 -0.4
4,763,330 + MPMX20_04550 0.53 +0.9
4,763,330 + MPMX20_04550 0.53 -1.5
4,763,330 + MPMX20_04550 0.53 +0.8
4,763,338 + MPMX20_04550 0.54 -1.9
4,763,338 - MPMX20_04550 0.54 -3.0
4,763,338 - MPMX20_04550 0.54 +0.5
4,763,514 + MPMX20_04550 0.78 -3.6
4,763,522 - MPMX20_04550 0.79 -0.5
4,763,524 + MPMX20_04550 0.79 -1.6
4,763,541 - MPMX20_04550 0.81 -1.3
4,763,596 - MPMX20_04550 0.89 -0.9
4,763,629 - -1.1
4,763,720 - +1.8
4,763,767 + +0.6
4,763,796 - -0.7
4,763,815 - -1.4

Or see this region's nucleotide sequence