Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03864

Experiment: L-Phenylalanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03862 and MPMX20_03863 are separated by 138 nucleotidesMPMX20_03863 and MPMX20_03864 overlap by 4 nucleotidesMPMX20_03864 and MPMX20_03865 are separated by 105 nucleotidesMPMX20_03865 and MPMX20_03866 are separated by 30 nucleotides MPMX20_03862: MPMX20_03862 - Protein YgiW, at 4,069,953 to 4,070,354 _03862 MPMX20_03863: MPMX20_03863 - Transcriptional regulatory protein QseB, at 4,070,493 to 4,071,152 _03863 MPMX20_03864: MPMX20_03864 - Sensor protein QseC, at 4,071,149 to 4,072,498 _03864 MPMX20_03865: MPMX20_03865 - NADPH:quinone oxidoreductase MdaB, at 4,072,604 to 4,073,185 _03865 MPMX20_03866: MPMX20_03866 - putative quinol monooxygenase YgiN, at 4,073,216 to 4,073,530 _03866 Position (kb) 4071 4072 4073Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4070.159 kb on + strand, within MPMX20_03862at 4070.159 kb on + strand, within MPMX20_03862at 4070.159 kb on + strand, within MPMX20_03862at 4070.162 kb on + strand, within MPMX20_03862at 4070.167 kb on - strand, within MPMX20_03862at 4070.167 kb on - strand, within MPMX20_03862at 4070.205 kb on + strand, within MPMX20_03862at 4070.211 kb on - strand, within MPMX20_03862at 4070.213 kb on - strand, within MPMX20_03862at 4070.261 kb on + strand, within MPMX20_03862at 4070.374 kb on - strandat 4070.386 kb on + strandat 4070.386 kb on + strandat 4070.386 kb on + strandat 4070.386 kb on + strandat 4070.394 kb on - strandat 4070.394 kb on - strandat 4070.394 kb on - strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.396 kb on + strandat 4070.404 kb on - strandat 4070.404 kb on - strandat 4070.404 kb on - strandat 4070.442 kb on + strandat 4070.442 kb on + strandat 4070.457 kb on + strandat 4070.460 kb on - strandat 4070.472 kb on - strandat 4070.474 kb on - strandat 4070.515 kb on - strandat 4070.516 kb on - strandat 4070.530 kb on - strandat 4070.542 kb on + strandat 4070.545 kb on - strandat 4070.637 kb on + strand, within MPMX20_03863at 4070.645 kb on - strand, within MPMX20_03863at 4070.654 kb on + strand, within MPMX20_03863at 4070.787 kb on - strand, within MPMX20_03863at 4070.789 kb on + strand, within MPMX20_03863at 4070.797 kb on - strand, within MPMX20_03863at 4070.805 kb on - strand, within MPMX20_03863at 4070.805 kb on - strand, within MPMX20_03863at 4070.885 kb on + strand, within MPMX20_03863at 4070.893 kb on - strand, within MPMX20_03863at 4070.934 kb on - strand, within MPMX20_03863at 4070.944 kb on + strand, within MPMX20_03863at 4070.963 kb on + strand, within MPMX20_03863at 4071.031 kb on - strand, within MPMX20_03863at 4071.031 kb on - strand, within MPMX20_03863at 4071.031 kb on - strand, within MPMX20_03863at 4071.032 kb on - strand, within MPMX20_03863at 4071.066 kb on - strand, within MPMX20_03863at 4071.073 kb on + strand, within MPMX20_03863at 4071.110 kb on - strandat 4071.123 kb on - strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.130 kb on + strandat 4071.138 kb on - strandat 4071.138 kb on - strandat 4071.138 kb on - strandat 4071.138 kb on - strandat 4071.138 kb on - strandat 4071.138 kb on - strandat 4071.143 kb on - strandat 4071.171 kb on + strandat 4071.171 kb on + strandat 4071.179 kb on - strandat 4071.243 kb on + strandat 4071.243 kb on + strandat 4071.251 kb on - strandat 4071.414 kb on - strand, within MPMX20_03864at 4071.511 kb on + strand, within MPMX20_03864at 4071.517 kb on - strand, within MPMX20_03864at 4071.592 kb on - strand, within MPMX20_03864at 4071.628 kb on - strand, within MPMX20_03864at 4071.630 kb on + strand, within MPMX20_03864at 4071.633 kb on - strand, within MPMX20_03864at 4071.638 kb on - strand, within MPMX20_03864at 4071.638 kb on - strand, within MPMX20_03864at 4071.671 kb on - strand, within MPMX20_03864at 4071.786 kb on + strand, within MPMX20_03864at 4071.803 kb on + strand, within MPMX20_03864at 4071.837 kb on + strand, within MPMX20_03864at 4071.837 kb on + strand, within MPMX20_03864at 4071.890 kb on + strand, within MPMX20_03864at 4071.892 kb on + strand, within MPMX20_03864at 4071.900 kb on - strand, within MPMX20_03864at 4071.905 kb on - strand, within MPMX20_03864at 4072.060 kb on - strand, within MPMX20_03864at 4072.081 kb on + strand, within MPMX20_03864at 4072.109 kb on + strand, within MPMX20_03864at 4072.138 kb on + strand, within MPMX20_03864at 4072.177 kb on + strand, within MPMX20_03864at 4072.177 kb on + strand, within MPMX20_03864at 4072.184 kb on + strand, within MPMX20_03864at 4072.184 kb on + strand, within MPMX20_03864at 4072.192 kb on - strand, within MPMX20_03864at 4072.217 kb on - strand, within MPMX20_03864at 4072.226 kb on + strand, within MPMX20_03864at 4072.231 kb on + strand, within MPMX20_03864at 4072.239 kb on - strand, within MPMX20_03864at 4072.376 kb on - strandat 4072.394 kb on + strandat 4072.402 kb on - strandat 4072.453 kb on + strandat 4072.456 kb on - strandat 4072.456 kb on - strandat 4072.461 kb on - strandat 4072.461 kb on - strandat 4072.473 kb on + strandat 4072.502 kb on - strandat 4072.621 kb on + strandat 4072.648 kb on + strandat 4072.648 kb on + strandat 4072.648 kb on + strandat 4072.648 kb on + strandat 4072.656 kb on - strandat 4072.656 kb on - strandat 4072.656 kb on - strandat 4072.656 kb on - strandat 4072.656 kb on - strandat 4072.771 kb on - strand, within MPMX20_03865at 4072.782 kb on - strand, within MPMX20_03865at 4072.784 kb on + strand, within MPMX20_03865at 4072.802 kb on + strand, within MPMX20_03865at 4072.825 kb on + strand, within MPMX20_03865at 4072.825 kb on + strand, within MPMX20_03865at 4072.825 kb on + strand, within MPMX20_03865at 4072.826 kb on + strand, within MPMX20_03865at 4072.833 kb on - strand, within MPMX20_03865at 4072.888 kb on - strand, within MPMX20_03865at 4072.895 kb on + strand, within MPMX20_03865at 4072.938 kb on + strand, within MPMX20_03865at 4072.946 kb on - strand, within MPMX20_03865at 4072.966 kb on + strand, within MPMX20_03865at 4072.973 kb on + strand, within MPMX20_03865at 4072.996 kb on - strand, within MPMX20_03865at 4073.040 kb on + strand, within MPMX20_03865at 4073.040 kb on + strand, within MPMX20_03865at 4073.061 kb on + strand, within MPMX20_03865at 4073.069 kb on - strand, within MPMX20_03865at 4073.097 kb on + strand, within MPMX20_03865at 4073.097 kb on + strand, within MPMX20_03865at 4073.097 kb on + strand, within MPMX20_03865at 4073.193 kb on - strandat 4073.207 kb on + strandat 4073.215 kb on - strandat 4073.217 kb on + strandat 4073.226 kb on - strandat 4073.260 kb on - strand, within MPMX20_03866at 4073.263 kb on + strand, within MPMX20_03866at 4073.268 kb on + strand, within MPMX20_03866at 4073.323 kb on - strand, within MPMX20_03866at 4073.381 kb on + strand, within MPMX20_03866at 4073.381 kb on + strand, within MPMX20_03866at 4073.408 kb on - strand, within MPMX20_03866at 4073.418 kb on - strand, within MPMX20_03866at 4073.420 kb on - strand, within MPMX20_03866at 4073.440 kb on + strand, within MPMX20_03866at 4073.448 kb on - strand, within MPMX20_03866at 4073.448 kb on - strand, within MPMX20_03866at 4073.462 kb on + strand, within MPMX20_03866

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
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4,070,159 + MPMX20_03862 0.51 -1.3
4,070,159 + MPMX20_03862 0.51 +1.6
4,070,159 + MPMX20_03862 0.51 +0.0
4,070,162 + MPMX20_03862 0.52 -2.0
4,070,167 - MPMX20_03862 0.53 -0.5
4,070,167 - MPMX20_03862 0.53 +0.4
4,070,205 + MPMX20_03862 0.63 -0.8
4,070,211 - MPMX20_03862 0.64 -0.8
4,070,213 - MPMX20_03862 0.65 +0.2
4,070,261 + MPMX20_03862 0.77 -0.2
4,070,374 - -1.8
4,070,386 + -0.6
4,070,386 + +0.9
4,070,386 + -0.3
4,070,386 + +0.8
4,070,394 - -0.1
4,070,394 - +1.1
4,070,394 - -0.4
4,070,396 + -0.3
4,070,396 + +0.5
4,070,396 + -0.1
4,070,396 + +1.2
4,070,396 + -0.3
4,070,396 + -0.4
4,070,396 + -2.3
4,070,404 - -2.6
4,070,404 - -0.9
4,070,404 - -1.8
4,070,442 + +0.2
4,070,442 + -2.6
4,070,457 + -0.3
4,070,460 - +0.4
4,070,472 - -0.4
4,070,474 - +0.6
4,070,515 - -2.1
4,070,516 - -0.2
4,070,530 - +0.2
4,070,542 + -0.9
4,070,545 - -1.1
4,070,637 + MPMX20_03863 0.22 -0.3
4,070,645 - MPMX20_03863 0.23 +1.5
4,070,654 + MPMX20_03863 0.24 -0.0
4,070,787 - MPMX20_03863 0.45 -2.3
4,070,789 + MPMX20_03863 0.45 -0.5
4,070,797 - MPMX20_03863 0.46 +0.2
4,070,805 - MPMX20_03863 0.47 -0.6
4,070,805 - MPMX20_03863 0.47 -1.0
4,070,885 + MPMX20_03863 0.59 +0.6
4,070,893 - MPMX20_03863 0.61 -0.3
4,070,934 - MPMX20_03863 0.67 +0.3
4,070,944 + MPMX20_03863 0.68 +0.9
4,070,963 + MPMX20_03863 0.71 +1.8
4,071,031 - MPMX20_03863 0.82 +2.0
4,071,031 - MPMX20_03863 0.82 +1.5
4,071,031 - MPMX20_03863 0.82 -0.2
4,071,032 - MPMX20_03863 0.82 +0.5
4,071,066 - MPMX20_03863 0.87 -0.1
4,071,073 + MPMX20_03863 0.88 +0.4
4,071,110 - -0.3
4,071,123 - -0.6
4,071,130 + +0.3
4,071,130 + -0.6
4,071,130 + -1.3
4,071,130 + -0.1
4,071,130 + -1.8
4,071,130 + +0.7
4,071,130 + -2.6
4,071,130 + +0.4
4,071,130 + -0.3
4,071,130 + -0.3
4,071,138 - -0.8
4,071,138 - -1.3
4,071,138 - -1.9
4,071,138 - -1.3
4,071,138 - -0.6
4,071,138 - -1.1
4,071,143 - +0.4
4,071,171 + -1.1
4,071,171 + +0.7
4,071,179 - +0.9
4,071,243 + +0.9
4,071,243 + -1.2
4,071,251 - -1.9
4,071,414 - MPMX20_03864 0.20 -0.6
4,071,511 + MPMX20_03864 0.27 -0.4
4,071,517 - MPMX20_03864 0.27 -0.6
4,071,592 - MPMX20_03864 0.33 +0.5
4,071,628 - MPMX20_03864 0.35 -0.6
4,071,630 + MPMX20_03864 0.36 -1.5
4,071,633 - MPMX20_03864 0.36 -0.8
4,071,638 - MPMX20_03864 0.36 -2.2
4,071,638 - MPMX20_03864 0.36 +0.5
4,071,671 - MPMX20_03864 0.39 -0.4
4,071,786 + MPMX20_03864 0.47 -0.6
4,071,803 + MPMX20_03864 0.48 -0.9
4,071,837 + MPMX20_03864 0.51 -1.1
4,071,837 + MPMX20_03864 0.51 -0.5
4,071,890 + MPMX20_03864 0.55 -2.8
4,071,892 + MPMX20_03864 0.55 -1.9
4,071,900 - MPMX20_03864 0.56 -1.6
4,071,905 - MPMX20_03864 0.56 -0.8
4,072,060 - MPMX20_03864 0.67 -0.6
4,072,081 + MPMX20_03864 0.69 -0.3
4,072,109 + MPMX20_03864 0.71 -1.1
4,072,138 + MPMX20_03864 0.73 +0.1
4,072,177 + MPMX20_03864 0.76 -2.0
4,072,177 + MPMX20_03864 0.76 -1.3
4,072,184 + MPMX20_03864 0.77 -2.1
4,072,184 + MPMX20_03864 0.77 +0.9
4,072,192 - MPMX20_03864 0.77 -0.6
4,072,217 - MPMX20_03864 0.79 -0.3
4,072,226 + MPMX20_03864 0.80 -1.8
4,072,231 + MPMX20_03864 0.80 -0.9
4,072,239 - MPMX20_03864 0.81 -3.0
4,072,376 - -0.8
4,072,394 + -0.6
4,072,402 - +0.2
4,072,453 + -1.7
4,072,456 - +0.3
4,072,456 - -2.9
4,072,461 - -0.8
4,072,461 - +0.4
4,072,473 + -0.6
4,072,502 - -2.9
4,072,621 + -0.6
4,072,648 + +1.0
4,072,648 + +0.1
4,072,648 + -0.3
4,072,648 + -1.0
4,072,656 - +1.2
4,072,656 - -0.1
4,072,656 - -2.1
4,072,656 - +1.9
4,072,656 - +0.6
4,072,771 - MPMX20_03865 0.29 +1.1
4,072,782 - MPMX20_03865 0.31 -1.7
4,072,784 + MPMX20_03865 0.31 +0.8
4,072,802 + MPMX20_03865 0.34 -0.8
4,072,825 + MPMX20_03865 0.38 +0.0
4,072,825 + MPMX20_03865 0.38 +0.9
4,072,825 + MPMX20_03865 0.38 +0.7
4,072,826 + MPMX20_03865 0.38 -0.4
4,072,833 - MPMX20_03865 0.39 -0.2
4,072,888 - MPMX20_03865 0.49 -1.2
4,072,895 + MPMX20_03865 0.50 +0.1
4,072,938 + MPMX20_03865 0.57 +0.1
4,072,946 - MPMX20_03865 0.59 +2.2
4,072,966 + MPMX20_03865 0.62 -1.4
4,072,973 + MPMX20_03865 0.63 -2.4
4,072,996 - MPMX20_03865 0.67 -0.4
4,073,040 + MPMX20_03865 0.75 -1.7
4,073,040 + MPMX20_03865 0.75 -1.1
4,073,061 + MPMX20_03865 0.79 +2.0
4,073,069 - MPMX20_03865 0.80 +1.7
4,073,097 + MPMX20_03865 0.85 +0.2
4,073,097 + MPMX20_03865 0.85 +0.5
4,073,097 + MPMX20_03865 0.85 -1.1
4,073,193 - +0.3
4,073,207 + +0.8
4,073,215 - -0.2
4,073,217 + +0.9
4,073,226 - -0.1
4,073,260 - MPMX20_03866 0.14 -0.4
4,073,263 + MPMX20_03866 0.15 +0.3
4,073,268 + MPMX20_03866 0.17 -2.3
4,073,323 - MPMX20_03866 0.34 -0.8
4,073,381 + MPMX20_03866 0.52 -2.0
4,073,381 + MPMX20_03866 0.52 -2.0
4,073,408 - MPMX20_03866 0.61 +0.6
4,073,418 - MPMX20_03866 0.64 -1.2
4,073,420 - MPMX20_03866 0.65 +0.7
4,073,440 + MPMX20_03866 0.71 +1.3
4,073,448 - MPMX20_03866 0.74 +0.1
4,073,448 - MPMX20_03866 0.74 -0.6
4,073,462 + MPMX20_03866 0.78 -0.8

Or see this region's nucleotide sequence