Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02620 and MPMX20_02621 overlap by 4 nucleotides MPMX20_02621 and MPMX20_02622 are separated by 11 nucleotides MPMX20_02622 and MPMX20_02623 are separated by 9 nucleotides
MPMX20_02620: MPMX20_02620 - Nitrate reductase, at 2,760,185 to 2,762,683
_02620
MPMX20_02621: MPMX20_02621 - Nitric oxide reductase FlRd-NAD(+) reductase, at 2,762,680 to 2,766,666
_02621
MPMX20_02622: MPMX20_02622 - Bicarbonate transport ATP-binding protein CmpC, at 2,766,678 to 2,767,466
_02622
MPMX20_02623: MPMX20_02623 - Bicarbonate transport system permease protein CmpB, at 2,767,476 to 2,768,357
_02623
Position (kb)
2762
2763
2764
2765
2766
2767 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2761.743 kb on + strand, within MPMX20_02620 at 2761.747 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.764 kb on + strand, within MPMX20_02620 at 2761.772 kb on - strand, within MPMX20_02620 at 2761.772 kb on - strand, within MPMX20_02620 at 2761.772 kb on - strand, within MPMX20_02620 at 2761.772 kb on - strand, within MPMX20_02620 at 2761.772 kb on - strand, within MPMX20_02620 at 2761.807 kb on - strand, within MPMX20_02620 at 2761.853 kb on - strand, within MPMX20_02620 at 2761.897 kb on + strand, within MPMX20_02620 at 2761.975 kb on - strand, within MPMX20_02620 at 2762.066 kb on + strand, within MPMX20_02620 at 2762.144 kb on + strand, within MPMX20_02620 at 2762.146 kb on + strand, within MPMX20_02620 at 2762.149 kb on + strand, within MPMX20_02620 at 2762.167 kb on + strand, within MPMX20_02620 at 2762.245 kb on + strand, within MPMX20_02620 at 2762.270 kb on + strand, within MPMX20_02620 at 2762.369 kb on - strand, within MPMX20_02620 at 2762.369 kb on - strand, within MPMX20_02620 at 2762.384 kb on - strand, within MPMX20_02620 at 2762.444 kb on - strand at 2762.519 kb on + strand at 2762.593 kb on - strand at 2762.595 kb on - strand at 2762.598 kb on - strand at 2762.654 kb on + strand at 2762.696 kb on + strand at 2762.696 kb on + strand at 2762.696 kb on + strand at 2762.720 kb on + strand at 2762.728 kb on - strand at 2762.763 kb on + strand at 2762.763 kb on + strand at 2762.831 kb on - strand at 2762.914 kb on + strand at 2762.922 kb on - strand at 2763.059 kb on + strand at 2763.067 kb on - strand at 2763.069 kb on + strand at 2763.072 kb on - strand at 2763.118 kb on + strand, within MPMX20_02621 at 2763.163 kb on + strand, within MPMX20_02621 at 2763.171 kb on - strand, within MPMX20_02621 at 2763.171 kb on - strand, within MPMX20_02621 at 2763.172 kb on + strand, within MPMX20_02621 at 2763.172 kb on + strand, within MPMX20_02621 at 2763.172 kb on + strand, within MPMX20_02621 at 2763.233 kb on + strand, within MPMX20_02621 at 2763.265 kb on - strand, within MPMX20_02621 at 2763.290 kb on + strand, within MPMX20_02621 at 2763.290 kb on + strand, within MPMX20_02621 at 2763.415 kb on + strand, within MPMX20_02621 at 2763.416 kb on + strand, within MPMX20_02621 at 2763.418 kb on - strand, within MPMX20_02621 at 2763.498 kb on + strand, within MPMX20_02621 at 2763.506 kb on - strand, within MPMX20_02621 at 2763.506 kb on - strand, within MPMX20_02621 at 2763.552 kb on - strand, within MPMX20_02621 at 2763.553 kb on - strand, within MPMX20_02621 at 2763.590 kb on - strand, within MPMX20_02621 at 2763.659 kb on - strand, within MPMX20_02621 at 2763.830 kb on + strand, within MPMX20_02621 at 2763.891 kb on + strand, within MPMX20_02621 at 2763.899 kb on - strand, within MPMX20_02621 at 2763.901 kb on + strand, within MPMX20_02621 at 2763.933 kb on - strand, within MPMX20_02621 at 2763.934 kb on - strand, within MPMX20_02621 at 2763.965 kb on - strand, within MPMX20_02621 at 2764.064 kb on + strand, within MPMX20_02621 at 2764.180 kb on + strand, within MPMX20_02621 at 2764.208 kb on + strand, within MPMX20_02621 at 2764.208 kb on + strand, within MPMX20_02621 at 2764.213 kb on + strand, within MPMX20_02621 at 2764.216 kb on - strand, within MPMX20_02621 at 2764.216 kb on - strand, within MPMX20_02621 at 2764.221 kb on - strand, within MPMX20_02621 at 2764.223 kb on + strand, within MPMX20_02621 at 2764.231 kb on - strand, within MPMX20_02621 at 2764.231 kb on - strand, within MPMX20_02621 at 2764.277 kb on + strand, within MPMX20_02621 at 2764.308 kb on + strand, within MPMX20_02621 at 2764.365 kb on + strand, within MPMX20_02621 at 2764.365 kb on + strand, within MPMX20_02621 at 2764.383 kb on + strand, within MPMX20_02621 at 2764.383 kb on + strand, within MPMX20_02621 at 2764.393 kb on - strand, within MPMX20_02621 at 2764.464 kb on + strand, within MPMX20_02621 at 2764.505 kb on - strand, within MPMX20_02621 at 2764.556 kb on + strand, within MPMX20_02621 at 2764.642 kb on + strand, within MPMX20_02621 at 2764.735 kb on + strand, within MPMX20_02621 at 2764.745 kb on - strand, within MPMX20_02621 at 2764.910 kb on - strand, within MPMX20_02621 at 2765.104 kb on + strand, within MPMX20_02621 at 2765.211 kb on - strand, within MPMX20_02621 at 2765.261 kb on - strand, within MPMX20_02621 at 2765.261 kb on - strand, within MPMX20_02621 at 2765.344 kb on + strand, within MPMX20_02621 at 2765.362 kb on - strand, within MPMX20_02621 at 2765.362 kb on - strand, within MPMX20_02621 at 2765.362 kb on - strand, within MPMX20_02621 at 2765.446 kb on - strand, within MPMX20_02621 at 2765.471 kb on - strand, within MPMX20_02621 at 2765.658 kb on + strand, within MPMX20_02621 at 2765.661 kb on - strand, within MPMX20_02621 at 2765.672 kb on + strand, within MPMX20_02621 at 2765.680 kb on - strand, within MPMX20_02621 at 2765.708 kb on - strand, within MPMX20_02621 at 2765.711 kb on + strand, within MPMX20_02621 at 2765.716 kb on + strand, within MPMX20_02621 at 2765.719 kb on - strand, within MPMX20_02621 at 2765.721 kb on + strand, within MPMX20_02621 at 2765.721 kb on + strand, within MPMX20_02621 at 2765.721 kb on + strand, within MPMX20_02621 at 2765.729 kb on - strand, within MPMX20_02621 at 2765.729 kb on - strand, within MPMX20_02621 at 2765.729 kb on - strand, within MPMX20_02621 at 2765.874 kb on - strand, within MPMX20_02621 at 2765.899 kb on + strand, within MPMX20_02621 at 2765.914 kb on + strand, within MPMX20_02621 at 2765.919 kb on + strand, within MPMX20_02621 at 2765.919 kb on + strand, within MPMX20_02621 at 2766.029 kb on + strand, within MPMX20_02621 at 2766.062 kb on + strand, within MPMX20_02621 at 2766.112 kb on - strand, within MPMX20_02621 at 2766.150 kb on + strand, within MPMX20_02621 at 2766.193 kb on + strand, within MPMX20_02621 at 2766.220 kb on + strand, within MPMX20_02621 at 2766.225 kb on + strand, within MPMX20_02621 at 2766.443 kb on + strand at 2766.452 kb on + strand at 2766.460 kb on - strand at 2766.517 kb on + strand at 2766.530 kb on - strand at 2766.596 kb on + strand at 2766.683 kb on - strand at 2766.683 kb on - strand at 2766.752 kb on - strand at 2766.752 kb on - strand at 2766.776 kb on + strand, within MPMX20_02622 at 2766.793 kb on - strand, within MPMX20_02622 at 2766.862 kb on + strand, within MPMX20_02622 at 2766.908 kb on - strand, within MPMX20_02622 at 2766.925 kb on + strand, within MPMX20_02622 at 2766.933 kb on - strand, within MPMX20_02622 at 2766.960 kb on - strand, within MPMX20_02622 at 2767.073 kb on + strand, within MPMX20_02622 at 2767.081 kb on - strand, within MPMX20_02622 at 2767.082 kb on - strand, within MPMX20_02622 at 2767.114 kb on - strand, within MPMX20_02622 at 2767.167 kb on - strand, within MPMX20_02622 at 2767.231 kb on - strand, within MPMX20_02622 at 2767.237 kb on + strand, within MPMX20_02622 at 2767.241 kb on - strand, within MPMX20_02622 at 2767.287 kb on - strand, within MPMX20_02622 at 2767.515 kb on - strand at 2767.517 kb on + strand at 2767.519 kb on - strand at 2767.544 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,761,743 + MPMX20_02620 0.62 +0.4 2,761,747 + MPMX20_02620 0.63 +0.9 2,761,764 + MPMX20_02620 0.63 -0.9 2,761,764 + MPMX20_02620 0.63 +0.1 2,761,764 + MPMX20_02620 0.63 -2.1 2,761,764 + MPMX20_02620 0.63 +1.1 2,761,764 + MPMX20_02620 0.63 +0.1 2,761,764 + MPMX20_02620 0.63 -2.4 2,761,772 - MPMX20_02620 0.64 -0.9 2,761,772 - MPMX20_02620 0.64 +1.4 2,761,772 - MPMX20_02620 0.64 -0.2 2,761,772 - MPMX20_02620 0.64 -2.6 2,761,772 - MPMX20_02620 0.64 -2.3 2,761,807 - MPMX20_02620 0.65 +0.2 2,761,853 - MPMX20_02620 0.67 -1.9 2,761,897 + MPMX20_02620 0.69 -1.1 2,761,975 - MPMX20_02620 0.72 +0.2 2,762,066 + MPMX20_02620 0.75 +1.2 2,762,144 + MPMX20_02620 0.78 -0.8 2,762,146 + MPMX20_02620 0.78 -1.2 2,762,149 + MPMX20_02620 0.79 -1.6 2,762,167 + MPMX20_02620 0.79 -0.2 2,762,245 + MPMX20_02620 0.82 +0.7 2,762,270 + MPMX20_02620 0.83 -0.1 2,762,369 - MPMX20_02620 0.87 -2.0 2,762,369 - MPMX20_02620 0.87 -0.9 2,762,384 - MPMX20_02620 0.88 -0.3 2,762,444 - +0.6 2,762,519 + -1.2 2,762,593 - -1.8 2,762,595 - +0.1 2,762,598 - -1.1 2,762,654 + -1.7 2,762,696 + -1.8 2,762,696 + -1.6 2,762,696 + -2.6 2,762,720 + -0.3 2,762,728 - -1.1 2,762,763 + -0.9 2,762,763 + -1.2 2,762,831 - -2.8 2,762,914 + -3.7 2,762,922 - -1.6 2,763,059 + -3.4 2,763,067 - -2.1 2,763,069 + -1.5 2,763,072 - -1.1 2,763,118 + MPMX20_02621 0.11 -2.7 2,763,163 + MPMX20_02621 0.12 -2.6 2,763,171 - MPMX20_02621 0.12 -2.9 2,763,171 - MPMX20_02621 0.12 +0.4 2,763,172 + MPMX20_02621 0.12 -0.9 2,763,172 + MPMX20_02621 0.12 -1.0 2,763,172 + MPMX20_02621 0.12 -2.4 2,763,233 + MPMX20_02621 0.14 -2.2 2,763,265 - MPMX20_02621 0.15 -1.9 2,763,290 + MPMX20_02621 0.15 -3.2 2,763,290 + MPMX20_02621 0.15 -2.1 2,763,415 + MPMX20_02621 0.18 -1.2 2,763,416 + MPMX20_02621 0.18 -0.2 2,763,418 - MPMX20_02621 0.19 -1.6 2,763,498 + MPMX20_02621 0.21 -1.1 2,763,506 - MPMX20_02621 0.21 -0.9 2,763,506 - MPMX20_02621 0.21 -2.5 2,763,552 - MPMX20_02621 0.22 -0.7 2,763,553 - MPMX20_02621 0.22 -1.3 2,763,590 - MPMX20_02621 0.23 -2.1 2,763,659 - MPMX20_02621 0.25 -3.0 2,763,830 + MPMX20_02621 0.29 -1.2 2,763,891 + MPMX20_02621 0.30 +0.1 2,763,899 - MPMX20_02621 0.31 -3.1 2,763,901 + MPMX20_02621 0.31 +0.8 2,763,933 - MPMX20_02621 0.31 -2.0 2,763,934 - MPMX20_02621 0.31 -2.5 2,763,965 - MPMX20_02621 0.32 -1.8 2,764,064 + MPMX20_02621 0.35 -1.1 2,764,180 + MPMX20_02621 0.38 -2.9 2,764,208 + MPMX20_02621 0.38 -0.6 2,764,208 + MPMX20_02621 0.38 -2.9 2,764,213 + MPMX20_02621 0.38 -2.1 2,764,216 - MPMX20_02621 0.39 -3.1 2,764,216 - MPMX20_02621 0.39 -0.3 2,764,221 - MPMX20_02621 0.39 -0.9 2,764,223 + MPMX20_02621 0.39 -2.3 2,764,231 - MPMX20_02621 0.39 -1.9 2,764,231 - MPMX20_02621 0.39 -2.9 2,764,277 + MPMX20_02621 0.40 -0.7 2,764,308 + MPMX20_02621 0.41 -0.2 2,764,365 + MPMX20_02621 0.42 -0.9 2,764,365 + MPMX20_02621 0.42 -1.9 2,764,383 + MPMX20_02621 0.43 -1.5 2,764,383 + MPMX20_02621 0.43 -0.7 2,764,393 - MPMX20_02621 0.43 -2.9 2,764,464 + MPMX20_02621 0.45 -1.6 2,764,505 - MPMX20_02621 0.46 -0.9 2,764,556 + MPMX20_02621 0.47 +0.1 2,764,642 + MPMX20_02621 0.49 +2.0 2,764,735 + MPMX20_02621 0.52 -1.7 2,764,745 - MPMX20_02621 0.52 -0.5 2,764,910 - MPMX20_02621 0.56 -2.3 2,765,104 + MPMX20_02621 0.61 -0.8 2,765,211 - MPMX20_02621 0.63 -0.7 2,765,261 - MPMX20_02621 0.65 -3.6 2,765,261 - MPMX20_02621 0.65 -2.9 2,765,344 + MPMX20_02621 0.67 -3.4 2,765,362 - MPMX20_02621 0.67 -1.2 2,765,362 - MPMX20_02621 0.67 -1.5 2,765,362 - MPMX20_02621 0.67 -2.3 2,765,446 - MPMX20_02621 0.69 -1.0 2,765,471 - MPMX20_02621 0.70 -2.3 2,765,658 + MPMX20_02621 0.75 +0.2 2,765,661 - MPMX20_02621 0.75 -0.2 2,765,672 + MPMX20_02621 0.75 -2.3 2,765,680 - MPMX20_02621 0.75 -0.0 2,765,708 - MPMX20_02621 0.76 -0.2 2,765,711 + MPMX20_02621 0.76 -0.8 2,765,716 + MPMX20_02621 0.76 -1.3 2,765,719 - MPMX20_02621 0.76 +2.4 2,765,721 + MPMX20_02621 0.76 +0.2 2,765,721 + MPMX20_02621 0.76 -1.2 2,765,721 + MPMX20_02621 0.76 -2.4 2,765,729 - MPMX20_02621 0.76 -0.3 2,765,729 - MPMX20_02621 0.76 -1.5 2,765,729 - MPMX20_02621 0.76 -0.2 2,765,874 - MPMX20_02621 0.80 -0.0 2,765,899 + MPMX20_02621 0.81 -1.3 2,765,914 + MPMX20_02621 0.81 -1.8 2,765,919 + MPMX20_02621 0.81 +2.3 2,765,919 + MPMX20_02621 0.81 -2.1 2,766,029 + MPMX20_02621 0.84 -1.5 2,766,062 + MPMX20_02621 0.85 +0.8 2,766,112 - MPMX20_02621 0.86 -0.9 2,766,150 + MPMX20_02621 0.87 -1.3 2,766,193 + MPMX20_02621 0.88 -1.6 2,766,220 + MPMX20_02621 0.89 -3.5 2,766,225 + MPMX20_02621 0.89 -1.7 2,766,443 + -1.4 2,766,452 + -1.7 2,766,460 - -1.7 2,766,517 + -1.3 2,766,530 - +0.2 2,766,596 + -1.4 2,766,683 - -0.1 2,766,683 - -0.9 2,766,752 - +1.1 2,766,752 - -0.0 2,766,776 + MPMX20_02622 0.12 -1.3 2,766,793 - MPMX20_02622 0.15 +1.0 2,766,862 + MPMX20_02622 0.23 +0.2 2,766,908 - MPMX20_02622 0.29 +1.5 2,766,925 + MPMX20_02622 0.31 -0.2 2,766,933 - MPMX20_02622 0.32 +0.6 2,766,960 - MPMX20_02622 0.36 +0.4 2,767,073 + MPMX20_02622 0.50 +0.0 2,767,081 - MPMX20_02622 0.51 +0.5 2,767,082 - MPMX20_02622 0.51 +0.0 2,767,114 - MPMX20_02622 0.55 +0.5 2,767,167 - MPMX20_02622 0.62 +0.7 2,767,231 - MPMX20_02622 0.70 +1.2 2,767,237 + MPMX20_02622 0.71 +2.2 2,767,241 - MPMX20_02622 0.71 +0.7 2,767,287 - MPMX20_02622 0.77 +1.1 2,767,515 - -0.2 2,767,517 + +0.6 2,767,519 - +0.5 2,767,544 + -0.0
Or see this region's nucleotide sequence