Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02615

Experiment: L-Phenylalanine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_02614 and MPMX20_02615 overlap by 4 nucleotidesMPMX20_02615 and MPMX20_02616 are separated by 381 nucleotides MPMX20_02614: MPMX20_02614 - Respiratory nitrate reductase 1 beta chain, at 2,748,896 to 2,750,431 _02614 MPMX20_02615: MPMX20_02615 - Respiratory nitrate reductase 1 alpha chain, at 2,750,428 to 2,754,171 _02615 MPMX20_02616: MPMX20_02616 - Nitrate/nitrite transporter NarK, at 2,754,553 to 2,755,950 _02616 Position (kb) 2750 2751 2752 2753 2754 2755Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 2749.454 kb on + strand, within MPMX20_02614at 2749.462 kb on - strand, within MPMX20_02614at 2749.569 kb on - strand, within MPMX20_02614at 2749.616 kb on - strand, within MPMX20_02614at 2749.616 kb on - strand, within MPMX20_02614at 2749.651 kb on + strand, within MPMX20_02614at 2749.659 kb on - strand, within MPMX20_02614at 2749.708 kb on + strand, within MPMX20_02614at 2749.785 kb on + strand, within MPMX20_02614at 2749.826 kb on + strand, within MPMX20_02614at 2749.867 kb on + strand, within MPMX20_02614at 2749.867 kb on + strand, within MPMX20_02614at 2749.875 kb on - strand, within MPMX20_02614at 2749.875 kb on - strand, within MPMX20_02614at 2749.875 kb on - strand, within MPMX20_02614at 2749.955 kb on + strand, within MPMX20_02614at 2749.955 kb on + strand, within MPMX20_02614at 2749.963 kb on - strand, within MPMX20_02614at 2750.005 kb on + strand, within MPMX20_02614at 2750.005 kb on + strand, within MPMX20_02614at 2750.062 kb on - strand, within MPMX20_02614at 2750.062 kb on - strand, within MPMX20_02614at 2750.096 kb on + strand, within MPMX20_02614at 2750.104 kb on - strand, within MPMX20_02614at 2750.315 kb on + strandat 2750.321 kb on + strandat 2750.369 kb on + strandat 2750.376 kb on - strandat 2750.376 kb on - strandat 2750.440 kb on + strandat 2750.440 kb on + strandat 2750.440 kb on + strandat 2750.440 kb on + strandat 2750.440 kb on + strandat 2750.440 kb on + strandat 2750.448 kb on - strandat 2750.448 kb on - strandat 2750.448 kb on - strandat 2750.448 kb on - strandat 2750.448 kb on - strandat 2750.556 kb on - strandat 2750.559 kb on + strandat 2750.614 kb on + strandat 2750.658 kb on + strandat 2750.768 kb on - strandat 2750.800 kb on - strandat 2750.800 kb on - strandat 2750.839 kb on - strand, within MPMX20_02615at 2750.839 kb on - strand, within MPMX20_02615at 2750.887 kb on + strand, within MPMX20_02615at 2750.984 kb on + strand, within MPMX20_02615at 2751.003 kb on + strand, within MPMX20_02615at 2751.037 kb on - strand, within MPMX20_02615at 2751.057 kb on + strand, within MPMX20_02615at 2751.057 kb on + strand, within MPMX20_02615at 2751.065 kb on - strand, within MPMX20_02615at 2751.065 kb on - strand, within MPMX20_02615at 2751.088 kb on + strand, within MPMX20_02615at 2751.134 kb on - strand, within MPMX20_02615at 2751.134 kb on - strand, within MPMX20_02615at 2751.166 kb on + strand, within MPMX20_02615at 2751.257 kb on - strand, within MPMX20_02615at 2751.344 kb on - strand, within MPMX20_02615at 2751.371 kb on + strand, within MPMX20_02615at 2751.406 kb on - strand, within MPMX20_02615at 2751.425 kb on + strand, within MPMX20_02615at 2751.475 kb on - strand, within MPMX20_02615at 2751.484 kb on - strand, within MPMX20_02615at 2751.517 kb on - strand, within MPMX20_02615at 2751.543 kb on + strand, within MPMX20_02615at 2751.717 kb on + strand, within MPMX20_02615at 2751.742 kb on - strand, within MPMX20_02615at 2751.836 kb on + strand, within MPMX20_02615at 2751.836 kb on + strand, within MPMX20_02615at 2751.844 kb on - strand, within MPMX20_02615at 2751.846 kb on + strand, within MPMX20_02615at 2751.912 kb on + strand, within MPMX20_02615at 2751.994 kb on + strand, within MPMX20_02615at 2752.031 kb on - strand, within MPMX20_02615at 2752.031 kb on - strand, within MPMX20_02615at 2752.129 kb on - strand, within MPMX20_02615at 2752.179 kb on - strand, within MPMX20_02615at 2752.181 kb on + strand, within MPMX20_02615at 2752.328 kb on - strand, within MPMX20_02615at 2752.500 kb on + strand, within MPMX20_02615at 2752.500 kb on + strand, within MPMX20_02615at 2752.508 kb on - strand, within MPMX20_02615at 2752.508 kb on - strand, within MPMX20_02615at 2752.518 kb on - strand, within MPMX20_02615at 2752.542 kb on - strand, within MPMX20_02615at 2752.567 kb on + strand, within MPMX20_02615at 2752.567 kb on + strand, within MPMX20_02615at 2752.575 kb on - strand, within MPMX20_02615at 2752.647 kb on - strand, within MPMX20_02615at 2752.649 kb on + strand, within MPMX20_02615at 2752.652 kb on - strand, within MPMX20_02615at 2752.657 kb on - strand, within MPMX20_02615at 2752.657 kb on - strand, within MPMX20_02615at 2752.657 kb on - strand, within MPMX20_02615at 2752.657 kb on - strand, within MPMX20_02615at 2752.735 kb on - strand, within MPMX20_02615at 2752.737 kb on + strand, within MPMX20_02615at 2752.848 kb on + strand, within MPMX20_02615at 2752.933 kb on + strand, within MPMX20_02615at 2752.949 kb on + strand, within MPMX20_02615at 2752.957 kb on - strand, within MPMX20_02615at 2752.975 kb on + strand, within MPMX20_02615at 2752.998 kb on - strand, within MPMX20_02615at 2753.012 kb on + strand, within MPMX20_02615at 2753.027 kb on + strand, within MPMX20_02615at 2753.106 kb on + strand, within MPMX20_02615at 2753.139 kb on + strand, within MPMX20_02615at 2753.139 kb on + strand, within MPMX20_02615at 2753.147 kb on - strand, within MPMX20_02615at 2753.189 kb on + strand, within MPMX20_02615at 2753.189 kb on + strand, within MPMX20_02615at 2753.237 kb on - strand, within MPMX20_02615at 2753.263 kb on + strand, within MPMX20_02615at 2753.274 kb on + strand, within MPMX20_02615at 2753.274 kb on + strand, within MPMX20_02615at 2753.300 kb on - strand, within MPMX20_02615at 2753.371 kb on + strand, within MPMX20_02615at 2753.387 kb on + strand, within MPMX20_02615at 2753.395 kb on - strand, within MPMX20_02615at 2753.400 kb on - strand, within MPMX20_02615at 2753.400 kb on - strand, within MPMX20_02615at 2753.403 kb on + strand, within MPMX20_02615at 2753.445 kb on - strand, within MPMX20_02615at 2753.472 kb on + strand, within MPMX20_02615at 2753.474 kb on + strand, within MPMX20_02615at 2753.474 kb on + strand, within MPMX20_02615at 2753.600 kb on + strand, within MPMX20_02615at 2753.703 kb on - strand, within MPMX20_02615at 2753.729 kb on - strand, within MPMX20_02615at 2753.729 kb on - strand, within MPMX20_02615at 2753.785 kb on + strand, within MPMX20_02615at 2753.850 kb on + strandat 2753.860 kb on + strandat 2753.865 kb on + strandat 2753.872 kb on + strandat 2753.885 kb on - strandat 2753.885 kb on - strandat 2753.904 kb on - strandat 2753.998 kb on + strandat 2754.003 kb on + strandat 2754.006 kb on - strandat 2754.016 kb on - strandat 2754.088 kb on + strandat 2754.096 kb on + strandat 2754.135 kb on + strandat 2754.143 kb on - strandat 2754.174 kb on + strandat 2754.182 kb on - strandat 2754.182 kb on - strandat 2754.184 kb on + strandat 2754.200 kb on + strandat 2754.232 kb on + strandat 2754.239 kb on + strandat 2754.291 kb on - strandat 2754.291 kb on - strandat 2754.302 kb on - strandat 2754.424 kb on - strandat 2754.451 kb on + strandat 2754.451 kb on + strandat 2754.459 kb on - strandat 2754.577 kb on + strandat 2754.577 kb on + strandat 2754.577 kb on + strandat 2754.577 kb on + strandat 2754.577 kb on + strandat 2754.585 kb on - strandat 2754.607 kb on + strandat 2754.660 kb on + strandat 2754.660 kb on + strandat 2754.660 kb on + strandat 2754.660 kb on + strandat 2754.661 kb on + strandat 2754.668 kb on - strandat 2754.668 kb on - strandat 2754.668 kb on - strandat 2754.668 kb on - strandat 2754.668 kb on - strandat 2754.674 kb on - strandat 2754.799 kb on - strand, within MPMX20_02616at 2754.856 kb on + strand, within MPMX20_02616at 2754.859 kb on - strand, within MPMX20_02616at 2754.864 kb on - strand, within MPMX20_02616at 2754.864 kb on - strand, within MPMX20_02616at 2754.916 kb on + strand, within MPMX20_02616at 2754.916 kb on + strand, within MPMX20_02616at 2754.925 kb on - strand, within MPMX20_02616at 2755.039 kb on + strand, within MPMX20_02616at 2755.067 kb on - strand, within MPMX20_02616at 2755.091 kb on + strand, within MPMX20_02616at 2755.099 kb on - strand, within MPMX20_02616at 2755.103 kb on + strand, within MPMX20_02616at 2755.111 kb on - strand, within MPMX20_02616at 2755.111 kb on - strand, within MPMX20_02616at 2755.154 kb on - strand, within MPMX20_02616at 2755.154 kb on - strand, within MPMX20_02616

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Phenylalanine (N)
remove
2,749,454 + MPMX20_02614 0.36 +0.2
2,749,462 - MPMX20_02614 0.37 +0.5
2,749,569 - MPMX20_02614 0.44 +0.1
2,749,616 - MPMX20_02614 0.47 -0.4
2,749,616 - MPMX20_02614 0.47 -1.8
2,749,651 + MPMX20_02614 0.49 -1.4
2,749,659 - MPMX20_02614 0.50 +1.8
2,749,708 + MPMX20_02614 0.53 +0.5
2,749,785 + MPMX20_02614 0.58 -0.2
2,749,826 + MPMX20_02614 0.61 +0.6
2,749,867 + MPMX20_02614 0.63 +0.3
2,749,867 + MPMX20_02614 0.63 -0.1
2,749,875 - MPMX20_02614 0.64 -2.6
2,749,875 - MPMX20_02614 0.64 -0.1
2,749,875 - MPMX20_02614 0.64 -0.5
2,749,955 + MPMX20_02614 0.69 +0.1
2,749,955 + MPMX20_02614 0.69 +0.3
2,749,963 - MPMX20_02614 0.69 -0.7
2,750,005 + MPMX20_02614 0.72 +0.1
2,750,005 + MPMX20_02614 0.72 +1.4
2,750,062 - MPMX20_02614 0.76 -0.6
2,750,062 - MPMX20_02614 0.76 -1.1
2,750,096 + MPMX20_02614 0.78 -0.2
2,750,104 - MPMX20_02614 0.79 +1.1
2,750,315 + +0.2
2,750,321 + +0.9
2,750,369 + -0.5
2,750,376 - +1.1
2,750,376 - -2.1
2,750,440 + +1.6
2,750,440 + -1.2
2,750,440 + -1.2
2,750,440 + -1.2
2,750,440 + -0.0
2,750,440 + -0.4
2,750,448 - -0.2
2,750,448 - +0.6
2,750,448 - -0.2
2,750,448 - -0.6
2,750,448 - -2.1
2,750,556 - +0.3
2,750,559 + +0.8
2,750,614 + +0.7
2,750,658 + +0.1
2,750,768 - +1.3
2,750,800 - +1.0
2,750,800 - +0.5
2,750,839 - MPMX20_02615 0.11 +0.6
2,750,839 - MPMX20_02615 0.11 +0.4
2,750,887 + MPMX20_02615 0.12 -1.0
2,750,984 + MPMX20_02615 0.15 -0.4
2,751,003 + MPMX20_02615 0.15 -1.2
2,751,037 - MPMX20_02615 0.16 -0.6
2,751,057 + MPMX20_02615 0.17 +3.6
2,751,057 + MPMX20_02615 0.17 +0.8
2,751,065 - MPMX20_02615 0.17 -0.0
2,751,065 - MPMX20_02615 0.17 -1.3
2,751,088 + MPMX20_02615 0.18 -1.4
2,751,134 - MPMX20_02615 0.19 -0.4
2,751,134 - MPMX20_02615 0.19 -1.7
2,751,166 + MPMX20_02615 0.20 -0.0
2,751,257 - MPMX20_02615 0.22 +0.1
2,751,344 - MPMX20_02615 0.24 +0.1
2,751,371 + MPMX20_02615 0.25 -1.6
2,751,406 - MPMX20_02615 0.26 -1.0
2,751,425 + MPMX20_02615 0.27 +0.1
2,751,475 - MPMX20_02615 0.28 -0.3
2,751,484 - MPMX20_02615 0.28 +0.8
2,751,517 - MPMX20_02615 0.29 +0.7
2,751,543 + MPMX20_02615 0.30 -1.6
2,751,717 + MPMX20_02615 0.34 -0.6
2,751,742 - MPMX20_02615 0.35 +0.7
2,751,836 + MPMX20_02615 0.38 -0.2
2,751,836 + MPMX20_02615 0.38 -0.6
2,751,844 - MPMX20_02615 0.38 -0.0
2,751,846 + MPMX20_02615 0.38 +0.1
2,751,912 + MPMX20_02615 0.40 -0.2
2,751,994 + MPMX20_02615 0.42 -0.6
2,752,031 - MPMX20_02615 0.43 +0.6
2,752,031 - MPMX20_02615 0.43 -0.4
2,752,129 - MPMX20_02615 0.45 +0.5
2,752,179 - MPMX20_02615 0.47 -0.7
2,752,181 + MPMX20_02615 0.47 -0.7
2,752,328 - MPMX20_02615 0.51 +1.1
2,752,500 + MPMX20_02615 0.55 -0.4
2,752,500 + MPMX20_02615 0.55 +0.3
2,752,508 - MPMX20_02615 0.56 -1.2
2,752,508 - MPMX20_02615 0.56 -0.4
2,752,518 - MPMX20_02615 0.56 -0.0
2,752,542 - MPMX20_02615 0.56 +0.4
2,752,567 + MPMX20_02615 0.57 -0.2
2,752,567 + MPMX20_02615 0.57 -0.3
2,752,575 - MPMX20_02615 0.57 -0.6
2,752,647 - MPMX20_02615 0.59 -0.3
2,752,649 + MPMX20_02615 0.59 -2.1
2,752,652 - MPMX20_02615 0.59 +0.6
2,752,657 - MPMX20_02615 0.60 -0.3
2,752,657 - MPMX20_02615 0.60 -0.4
2,752,657 - MPMX20_02615 0.60 +4.0
2,752,657 - MPMX20_02615 0.60 +0.3
2,752,735 - MPMX20_02615 0.62 +0.6
2,752,737 + MPMX20_02615 0.62 -1.4
2,752,848 + MPMX20_02615 0.65 -0.2
2,752,933 + MPMX20_02615 0.67 -0.5
2,752,949 + MPMX20_02615 0.67 -1.2
2,752,957 - MPMX20_02615 0.68 +3.1
2,752,975 + MPMX20_02615 0.68 +0.8
2,752,998 - MPMX20_02615 0.69 +1.5
2,753,012 + MPMX20_02615 0.69 +1.0
2,753,027 + MPMX20_02615 0.69 -1.2
2,753,106 + MPMX20_02615 0.72 -0.2
2,753,139 + MPMX20_02615 0.72 +0.6
2,753,139 + MPMX20_02615 0.72 +0.5
2,753,147 - MPMX20_02615 0.73 -0.6
2,753,189 + MPMX20_02615 0.74 -0.0
2,753,189 + MPMX20_02615 0.74 +0.1
2,753,237 - MPMX20_02615 0.75 +0.3
2,753,263 + MPMX20_02615 0.76 -0.5
2,753,274 + MPMX20_02615 0.76 -0.9
2,753,274 + MPMX20_02615 0.76 -0.1
2,753,300 - MPMX20_02615 0.77 +1.3
2,753,371 + MPMX20_02615 0.79 -0.6
2,753,387 + MPMX20_02615 0.79 +0.2
2,753,395 - MPMX20_02615 0.79 +0.6
2,753,400 - MPMX20_02615 0.79 -0.9
2,753,400 - MPMX20_02615 0.79 +1.9
2,753,403 + MPMX20_02615 0.79 -0.6
2,753,445 - MPMX20_02615 0.81 +0.8
2,753,472 + MPMX20_02615 0.81 -0.3
2,753,474 + MPMX20_02615 0.81 -1.0
2,753,474 + MPMX20_02615 0.81 +2.1
2,753,600 + MPMX20_02615 0.85 -1.9
2,753,703 - MPMX20_02615 0.87 -0.1
2,753,729 - MPMX20_02615 0.88 +0.8
2,753,729 - MPMX20_02615 0.88 -0.0
2,753,785 + MPMX20_02615 0.90 +2.3
2,753,850 + -0.1
2,753,860 + -0.2
2,753,865 + -1.2
2,753,872 + +0.8
2,753,885 - -0.5
2,753,885 - -0.5
2,753,904 - -0.6
2,753,998 + -0.9
2,754,003 + +0.3
2,754,006 - -0.4
2,754,016 - -0.7
2,754,088 + -0.7
2,754,096 + +1.4
2,754,135 + -1.5
2,754,143 - -1.8
2,754,174 + -0.6
2,754,182 - -0.4
2,754,182 - -1.6
2,754,184 + +0.3
2,754,200 + +0.7
2,754,232 + +0.6
2,754,239 + -1.4
2,754,291 - -0.5
2,754,291 - -0.1
2,754,302 - -0.0
2,754,424 - +0.4
2,754,451 + +0.5
2,754,451 + -0.2
2,754,459 - +1.4
2,754,577 + +0.5
2,754,577 + +0.2
2,754,577 + -0.1
2,754,577 + +0.3
2,754,577 + -0.4
2,754,585 - +0.3
2,754,607 + +0.4
2,754,660 + +1.5
2,754,660 + -0.2
2,754,660 + -0.7
2,754,660 + +0.4
2,754,661 + -0.6
2,754,668 - -0.2
2,754,668 - -2.3
2,754,668 - -0.0
2,754,668 - -0.5
2,754,668 - -0.2
2,754,674 - -1.4
2,754,799 - MPMX20_02616 0.18 -0.9
2,754,856 + MPMX20_02616 0.22 -0.7
2,754,859 - MPMX20_02616 0.22 +0.5
2,754,864 - MPMX20_02616 0.22 -1.2
2,754,864 - MPMX20_02616 0.22 +0.2
2,754,916 + MPMX20_02616 0.26 +0.1
2,754,916 + MPMX20_02616 0.26 -1.2
2,754,925 - MPMX20_02616 0.27 -0.1
2,755,039 + MPMX20_02616 0.35 +0.7
2,755,067 - MPMX20_02616 0.37 -2.0
2,755,091 + MPMX20_02616 0.38 -0.3
2,755,099 - MPMX20_02616 0.39 +0.3
2,755,103 + MPMX20_02616 0.39 -0.3
2,755,111 - MPMX20_02616 0.40 +0.5
2,755,111 - MPMX20_02616 0.40 -1.9
2,755,154 - MPMX20_02616 0.43 +0.8
2,755,154 - MPMX20_02616 0.43 +0.2

Or see this region's nucleotide sequence