Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02385 and MPMX20_02386 are separated by 66 nucleotides MPMX20_02386 and MPMX20_02387 overlap by 4 nucleotides
MPMX20_02385: MPMX20_02385 - Nitrate/nitrite transporter NarU, at 2,514,948 to 2,516,333
_02385
MPMX20_02386: MPMX20_02386 - Respiratory nitrate reductase 2 alpha chain, at 2,516,400 to 2,520,140
_02386
MPMX20_02387: MPMX20_02387 - Respiratory nitrate reductase 2 beta chain, at 2,520,137 to 2,521,681
_02387
Position (kb)
2516
2517
2518
2519
2520
2521 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2515.425 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.430 kb on + strand, within MPMX20_02385 at 2515.438 kb on - strand, within MPMX20_02385 at 2515.438 kb on - strand, within MPMX20_02385 at 2515.438 kb on - strand, within MPMX20_02385 at 2515.438 kb on - strand, within MPMX20_02385 at 2515.438 kb on - strand, within MPMX20_02385 at 2515.472 kb on - strand, within MPMX20_02385 at 2515.473 kb on - strand, within MPMX20_02385 at 2515.477 kb on + strand, within MPMX20_02385 at 2515.485 kb on - strand, within MPMX20_02385 at 2515.567 kb on + strand, within MPMX20_02385 at 2515.577 kb on + strand, within MPMX20_02385 at 2515.658 kb on + strand, within MPMX20_02385 at 2515.721 kb on - strand, within MPMX20_02385 at 2515.731 kb on - strand, within MPMX20_02385 at 2515.732 kb on - strand, within MPMX20_02385 at 2515.737 kb on - strand, within MPMX20_02385 at 2515.746 kb on - strand, within MPMX20_02385 at 2515.746 kb on - strand, within MPMX20_02385 at 2515.767 kb on + strand, within MPMX20_02385 at 2515.767 kb on + strand, within MPMX20_02385 at 2515.771 kb on + strand, within MPMX20_02385 at 2515.779 kb on - strand, within MPMX20_02385 at 2515.802 kb on + strand, within MPMX20_02385 at 2515.802 kb on + strand, within MPMX20_02385 at 2515.858 kb on - strand, within MPMX20_02385 at 2515.858 kb on - strand, within MPMX20_02385 at 2515.858 kb on - strand, within MPMX20_02385 at 2515.905 kb on - strand, within MPMX20_02385 at 2515.963 kb on + strand, within MPMX20_02385 at 2515.963 kb on + strand, within MPMX20_02385 at 2515.971 kb on - strand, within MPMX20_02385 at 2515.971 kb on - strand, within MPMX20_02385 at 2516.001 kb on - strand, within MPMX20_02385 at 2516.012 kb on + strand, within MPMX20_02385 at 2516.025 kb on + strand, within MPMX20_02385 at 2516.028 kb on - strand, within MPMX20_02385 at 2516.033 kb on - strand, within MPMX20_02385 at 2516.033 kb on - strand, within MPMX20_02385 at 2516.087 kb on - strand, within MPMX20_02385 at 2516.087 kb on - strand, within MPMX20_02385 at 2516.097 kb on - strand, within MPMX20_02385 at 2516.111 kb on - strand, within MPMX20_02385 at 2516.116 kb on + strand, within MPMX20_02385 at 2516.126 kb on + strand, within MPMX20_02385 at 2516.134 kb on - strand, within MPMX20_02385 at 2516.134 kb on - strand, within MPMX20_02385 at 2516.240 kb on + strand at 2516.289 kb on + strand at 2516.334 kb on + strand at 2516.355 kb on - strand at 2516.357 kb on + strand at 2516.360 kb on - strand at 2516.365 kb on - strand at 2516.461 kb on + strand at 2516.480 kb on - strand at 2516.482 kb on - strand at 2516.488 kb on - strand at 2516.492 kb on - strand at 2516.494 kb on - strand at 2516.496 kb on - strand at 2516.501 kb on + strand at 2516.545 kb on + strand at 2516.652 kb on - strand at 2516.652 kb on - strand at 2516.667 kb on + strand at 2516.667 kb on - strand at 2516.703 kb on + strand at 2516.786 kb on - strand, within MPMX20_02386 at 2516.809 kb on - strand, within MPMX20_02386 at 2516.844 kb on - strand, within MPMX20_02386 at 2516.892 kb on + strand, within MPMX20_02386 at 2516.921 kb on + strand, within MPMX20_02386 at 2516.921 kb on + strand, within MPMX20_02386 at 2516.921 kb on + strand, within MPMX20_02386 at 2516.937 kb on - strand, within MPMX20_02386 at 2516.943 kb on + strand, within MPMX20_02386 at 2516.993 kb on + strand, within MPMX20_02386 at 2517.126 kb on + strand, within MPMX20_02386 at 2517.126 kb on + strand, within MPMX20_02386 at 2517.189 kb on + strand, within MPMX20_02386 at 2517.253 kb on + strand, within MPMX20_02386 at 2517.300 kb on + strand, within MPMX20_02386 at 2517.302 kb on - strand, within MPMX20_02386 at 2517.308 kb on - strand, within MPMX20_02386 at 2517.391 kb on - strand, within MPMX20_02386 at 2517.453 kb on + strand, within MPMX20_02386 at 2517.475 kb on + strand, within MPMX20_02386 at 2517.673 kb on + strand, within MPMX20_02386 at 2517.676 kb on - strand, within MPMX20_02386 at 2517.681 kb on - strand, within MPMX20_02386 at 2517.681 kb on - strand, within MPMX20_02386 at 2517.730 kb on + strand, within MPMX20_02386 at 2517.757 kb on + strand, within MPMX20_02386 at 2517.777 kb on - strand, within MPMX20_02386 at 2517.783 kb on - strand, within MPMX20_02386 at 2517.864 kb on - strand, within MPMX20_02386 at 2517.866 kb on - strand, within MPMX20_02386 at 2517.883 kb on + strand, within MPMX20_02386 at 2517.883 kb on + strand, within MPMX20_02386 at 2517.891 kb on - strand, within MPMX20_02386 at 2517.891 kb on - strand, within MPMX20_02386 at 2517.891 kb on - strand, within MPMX20_02386 at 2517.919 kb on - strand, within MPMX20_02386 at 2517.948 kb on - strand, within MPMX20_02386 at 2518.026 kb on + strand, within MPMX20_02386 at 2518.029 kb on - strand, within MPMX20_02386 at 2518.050 kb on + strand, within MPMX20_02386 at 2518.058 kb on - strand, within MPMX20_02386 at 2518.058 kb on - strand, within MPMX20_02386 at 2518.109 kb on - strand, within MPMX20_02386 at 2518.128 kb on - strand, within MPMX20_02386 at 2518.137 kb on - strand, within MPMX20_02386 at 2518.187 kb on + strand, within MPMX20_02386 at 2518.190 kb on - strand, within MPMX20_02386 at 2518.196 kb on - strand, within MPMX20_02386 at 2518.196 kb on - strand, within MPMX20_02386 at 2518.217 kb on - strand, within MPMX20_02386 at 2518.258 kb on + strand, within MPMX20_02386 at 2518.286 kb on - strand, within MPMX20_02386 at 2518.342 kb on + strand, within MPMX20_02386 at 2518.364 kb on + strand, within MPMX20_02386 at 2518.364 kb on + strand, within MPMX20_02386 at 2518.372 kb on - strand, within MPMX20_02386 at 2518.374 kb on - strand, within MPMX20_02386 at 2518.430 kb on - strand, within MPMX20_02386 at 2518.439 kb on + strand, within MPMX20_02386 at 2518.439 kb on + strand, within MPMX20_02386 at 2518.439 kb on + strand, within MPMX20_02386 at 2518.439 kb on + strand, within MPMX20_02386 at 2518.439 kb on + strand, within MPMX20_02386 at 2518.440 kb on - strand, within MPMX20_02386 at 2518.447 kb on - strand, within MPMX20_02386 at 2518.447 kb on - strand, within MPMX20_02386 at 2518.447 kb on - strand, within MPMX20_02386 at 2518.447 kb on - strand, within MPMX20_02386 at 2518.545 kb on - strand, within MPMX20_02386 at 2518.566 kb on + strand, within MPMX20_02386 at 2518.574 kb on - strand, within MPMX20_02386 at 2518.651 kb on - strand, within MPMX20_02386 at 2518.679 kb on - strand, within MPMX20_02386 at 2518.690 kb on + strand, within MPMX20_02386 at 2518.690 kb on + strand, within MPMX20_02386 at 2518.698 kb on - strand, within MPMX20_02386 at 2518.698 kb on - strand, within MPMX20_02386 at 2518.732 kb on + strand, within MPMX20_02386 at 2518.831 kb on - strand, within MPMX20_02386 at 2518.831 kb on - strand, within MPMX20_02386 at 2518.845 kb on + strand, within MPMX20_02386 at 2518.852 kb on - strand, within MPMX20_02386 at 2518.881 kb on + strand, within MPMX20_02386 at 2518.889 kb on - strand, within MPMX20_02386 at 2518.889 kb on - strand, within MPMX20_02386 at 2518.915 kb on - strand, within MPMX20_02386 at 2518.939 kb on + strand, within MPMX20_02386 at 2519.112 kb on + strand, within MPMX20_02386 at 2519.251 kb on + strand, within MPMX20_02386 at 2519.259 kb on - strand, within MPMX20_02386 at 2519.259 kb on - strand, within MPMX20_02386 at 2519.319 kb on - strand, within MPMX20_02386 at 2519.358 kb on - strand, within MPMX20_02386 at 2519.360 kb on + strand, within MPMX20_02386 at 2519.360 kb on + strand, within MPMX20_02386 at 2519.368 kb on - strand, within MPMX20_02386 at 2519.373 kb on + strand, within MPMX20_02386 at 2519.394 kb on + strand, within MPMX20_02386 at 2519.402 kb on - strand, within MPMX20_02386 at 2519.402 kb on - strand, within MPMX20_02386 at 2519.402 kb on - strand, within MPMX20_02386 at 2519.441 kb on + strand, within MPMX20_02386 at 2519.571 kb on - strand, within MPMX20_02386 at 2519.775 kb on + strand at 2519.775 kb on + strand at 2519.783 kb on - strand at 2519.783 kb on - strand at 2519.783 kb on - strand at 2519.808 kb on + strand at 2519.808 kb on + strand at 2519.844 kb on + strand at 2519.844 kb on + strand at 2519.847 kb on - strand at 2519.862 kb on + strand at 2519.881 kb on - strand at 2519.887 kb on - strand at 2519.987 kb on - strand at 2520.012 kb on + strand at 2520.062 kb on - strand at 2520.154 kb on + strand at 2520.164 kb on - strand at 2520.201 kb on + strand at 2520.228 kb on - strand at 2520.228 kb on - strand at 2520.228 kb on - strand at 2520.308 kb on + strand, within MPMX20_02387 at 2520.472 kb on - strand, within MPMX20_02387 at 2520.487 kb on - strand, within MPMX20_02387 at 2520.487 kb on - strand, within MPMX20_02387 at 2520.493 kb on + strand, within MPMX20_02387 at 2520.505 kb on + strand, within MPMX20_02387 at 2520.554 kb on + strand, within MPMX20_02387 at 2520.572 kb on - strand, within MPMX20_02387 at 2520.582 kb on - strand, within MPMX20_02387 at 2520.612 kb on + strand, within MPMX20_02387 at 2520.691 kb on - strand, within MPMX20_02387 at 2520.744 kb on - strand, within MPMX20_02387 at 2520.939 kb on + strand, within MPMX20_02387 at 2520.952 kb on + strand, within MPMX20_02387 at 2521.090 kb on + strand, within MPMX20_02387
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 2,515,425 + MPMX20_02385 0.34 -0.8 2,515,430 + MPMX20_02385 0.35 +0.7 2,515,430 + MPMX20_02385 0.35 +0.2 2,515,430 + MPMX20_02385 0.35 -1.9 2,515,430 + MPMX20_02385 0.35 +1.2 2,515,430 + MPMX20_02385 0.35 +1.4 2,515,430 + MPMX20_02385 0.35 -0.7 2,515,438 - MPMX20_02385 0.35 +0.5 2,515,438 - MPMX20_02385 0.35 +0.3 2,515,438 - MPMX20_02385 0.35 -0.1 2,515,438 - MPMX20_02385 0.35 -3.1 2,515,438 - MPMX20_02385 0.35 -1.3 2,515,472 - MPMX20_02385 0.38 -2.5 2,515,473 - MPMX20_02385 0.38 -1.6 2,515,477 + MPMX20_02385 0.38 -0.0 2,515,485 - MPMX20_02385 0.39 +0.8 2,515,567 + MPMX20_02385 0.45 -0.2 2,515,577 + MPMX20_02385 0.45 -0.1 2,515,658 + MPMX20_02385 0.51 -0.3 2,515,721 - MPMX20_02385 0.56 -1.1 2,515,731 - MPMX20_02385 0.56 -0.7 2,515,732 - MPMX20_02385 0.57 -0.2 2,515,737 - MPMX20_02385 0.57 +0.5 2,515,746 - MPMX20_02385 0.58 -0.9 2,515,746 - MPMX20_02385 0.58 +0.1 2,515,767 + MPMX20_02385 0.59 +0.2 2,515,767 + MPMX20_02385 0.59 -1.4 2,515,771 + MPMX20_02385 0.59 +0.5 2,515,779 - MPMX20_02385 0.60 -0.5 2,515,802 + MPMX20_02385 0.62 -2.0 2,515,802 + MPMX20_02385 0.62 -0.3 2,515,858 - MPMX20_02385 0.66 +0.6 2,515,858 - MPMX20_02385 0.66 -1.3 2,515,858 - MPMX20_02385 0.66 +1.4 2,515,905 - MPMX20_02385 0.69 +0.0 2,515,963 + MPMX20_02385 0.73 -0.5 2,515,963 + MPMX20_02385 0.73 +0.3 2,515,971 - MPMX20_02385 0.74 -0.7 2,515,971 - MPMX20_02385 0.74 -0.5 2,516,001 - MPMX20_02385 0.76 +0.7 2,516,012 + MPMX20_02385 0.77 +0.9 2,516,025 + MPMX20_02385 0.78 +0.3 2,516,028 - MPMX20_02385 0.78 +0.2 2,516,033 - MPMX20_02385 0.78 -0.1 2,516,033 - MPMX20_02385 0.78 -0.0 2,516,087 - MPMX20_02385 0.82 -0.9 2,516,087 - MPMX20_02385 0.82 -0.3 2,516,097 - MPMX20_02385 0.83 +1.0 2,516,111 - MPMX20_02385 0.84 -0.7 2,516,116 + MPMX20_02385 0.84 +1.6 2,516,126 + MPMX20_02385 0.85 +0.4 2,516,134 - MPMX20_02385 0.86 +0.7 2,516,134 - MPMX20_02385 0.86 -2.4 2,516,240 + -0.8 2,516,289 + -0.5 2,516,334 + +0.8 2,516,355 - -1.2 2,516,357 + -0.4 2,516,360 - +1.6 2,516,365 - -0.8 2,516,461 + -0.6 2,516,480 - -0.8 2,516,482 - -0.6 2,516,488 - +0.1 2,516,492 - +1.7 2,516,494 - -0.2 2,516,496 - -0.6 2,516,501 + -0.2 2,516,545 + -0.0 2,516,652 - -0.4 2,516,652 - -0.4 2,516,667 + -0.3 2,516,667 - +0.3 2,516,703 + -1.9 2,516,786 - MPMX20_02386 0.10 -0.6 2,516,809 - MPMX20_02386 0.11 -1.9 2,516,844 - MPMX20_02386 0.12 +1.3 2,516,892 + MPMX20_02386 0.13 +0.5 2,516,921 + MPMX20_02386 0.14 +0.4 2,516,921 + MPMX20_02386 0.14 -0.5 2,516,921 + MPMX20_02386 0.14 -0.5 2,516,937 - MPMX20_02386 0.14 +2.1 2,516,943 + MPMX20_02386 0.15 -0.8 2,516,993 + MPMX20_02386 0.16 +0.4 2,517,126 + MPMX20_02386 0.19 +0.1 2,517,126 + MPMX20_02386 0.19 -1.4 2,517,189 + MPMX20_02386 0.21 -0.7 2,517,253 + MPMX20_02386 0.23 +0.5 2,517,300 + MPMX20_02386 0.24 -1.5 2,517,302 - MPMX20_02386 0.24 -1.6 2,517,308 - MPMX20_02386 0.24 -1.9 2,517,391 - MPMX20_02386 0.26 +0.1 2,517,453 + MPMX20_02386 0.28 +0.3 2,517,475 + MPMX20_02386 0.29 +0.9 2,517,673 + MPMX20_02386 0.34 -0.9 2,517,676 - MPMX20_02386 0.34 +0.3 2,517,681 - MPMX20_02386 0.34 -2.1 2,517,681 - MPMX20_02386 0.34 -0.5 2,517,730 + MPMX20_02386 0.36 +0.4 2,517,757 + MPMX20_02386 0.36 -1.1 2,517,777 - MPMX20_02386 0.37 +0.4 2,517,783 - MPMX20_02386 0.37 -1.0 2,517,864 - MPMX20_02386 0.39 -0.1 2,517,866 - MPMX20_02386 0.39 -1.4 2,517,883 + MPMX20_02386 0.40 -1.1 2,517,883 + MPMX20_02386 0.40 +1.8 2,517,891 - MPMX20_02386 0.40 -0.7 2,517,891 - MPMX20_02386 0.40 -1.2 2,517,891 - MPMX20_02386 0.40 +1.0 2,517,919 - MPMX20_02386 0.41 -1.5 2,517,948 - MPMX20_02386 0.41 -0.3 2,518,026 + MPMX20_02386 0.43 +1.1 2,518,029 - MPMX20_02386 0.44 -0.0 2,518,050 + MPMX20_02386 0.44 +0.5 2,518,058 - MPMX20_02386 0.44 +0.4 2,518,058 - MPMX20_02386 0.44 -0.0 2,518,109 - MPMX20_02386 0.46 -3.0 2,518,128 - MPMX20_02386 0.46 -0.2 2,518,137 - MPMX20_02386 0.46 -0.9 2,518,187 + MPMX20_02386 0.48 -0.2 2,518,190 - MPMX20_02386 0.48 -0.6 2,518,196 - MPMX20_02386 0.48 +0.7 2,518,196 - MPMX20_02386 0.48 -1.4 2,518,217 - MPMX20_02386 0.49 +1.0 2,518,258 + MPMX20_02386 0.50 -1.2 2,518,286 - MPMX20_02386 0.50 -0.7 2,518,342 + MPMX20_02386 0.52 +0.2 2,518,364 + MPMX20_02386 0.52 +0.0 2,518,364 + MPMX20_02386 0.52 +0.6 2,518,372 - MPMX20_02386 0.53 -0.0 2,518,374 - MPMX20_02386 0.53 +0.4 2,518,430 - MPMX20_02386 0.54 -3.0 2,518,439 + MPMX20_02386 0.55 -0.5 2,518,439 + MPMX20_02386 0.55 -0.6 2,518,439 + MPMX20_02386 0.55 -0.2 2,518,439 + MPMX20_02386 0.55 -1.3 2,518,439 + MPMX20_02386 0.55 +0.4 2,518,440 - MPMX20_02386 0.55 +2.1 2,518,447 - MPMX20_02386 0.55 +0.3 2,518,447 - MPMX20_02386 0.55 +0.6 2,518,447 - MPMX20_02386 0.55 -2.5 2,518,447 - MPMX20_02386 0.55 +0.0 2,518,545 - MPMX20_02386 0.57 -1.2 2,518,566 + MPMX20_02386 0.58 +0.2 2,518,574 - MPMX20_02386 0.58 -2.1 2,518,651 - MPMX20_02386 0.60 +0.5 2,518,679 - MPMX20_02386 0.61 +1.8 2,518,690 + MPMX20_02386 0.61 +0.3 2,518,690 + MPMX20_02386 0.61 -0.4 2,518,698 - MPMX20_02386 0.61 -0.5 2,518,698 - MPMX20_02386 0.61 -0.1 2,518,732 + MPMX20_02386 0.62 +0.2 2,518,831 - MPMX20_02386 0.65 +1.4 2,518,831 - MPMX20_02386 0.65 +2.1 2,518,845 + MPMX20_02386 0.65 +1.1 2,518,852 - MPMX20_02386 0.66 -0.0 2,518,881 + MPMX20_02386 0.66 +0.2 2,518,889 - MPMX20_02386 0.67 +1.1 2,518,889 - MPMX20_02386 0.67 -1.0 2,518,915 - MPMX20_02386 0.67 +0.5 2,518,939 + MPMX20_02386 0.68 +0.3 2,519,112 + MPMX20_02386 0.72 -3.4 2,519,251 + MPMX20_02386 0.76 -1.0 2,519,259 - MPMX20_02386 0.76 +1.2 2,519,259 - MPMX20_02386 0.76 -0.7 2,519,319 - MPMX20_02386 0.78 -1.2 2,519,358 - MPMX20_02386 0.79 +0.6 2,519,360 + MPMX20_02386 0.79 +0.4 2,519,360 + MPMX20_02386 0.79 -0.3 2,519,368 - MPMX20_02386 0.79 +0.6 2,519,373 + MPMX20_02386 0.79 -2.2 2,519,394 + MPMX20_02386 0.80 +0.4 2,519,402 - MPMX20_02386 0.80 -2.9 2,519,402 - MPMX20_02386 0.80 +0.5 2,519,402 - MPMX20_02386 0.80 -0.4 2,519,441 + MPMX20_02386 0.81 -0.2 2,519,571 - MPMX20_02386 0.85 -1.7 2,519,775 + +0.2 2,519,775 + +0.7 2,519,783 - +3.0 2,519,783 - -0.3 2,519,783 - -0.4 2,519,808 + -1.6 2,519,808 + +0.9 2,519,844 + -0.9 2,519,844 + -0.4 2,519,847 - -0.8 2,519,862 + +1.4 2,519,881 - -0.7 2,519,887 - -0.6 2,519,987 - +0.2 2,520,012 + -0.5 2,520,062 - -0.8 2,520,154 + +1.4 2,520,164 - -0.0 2,520,201 + +0.5 2,520,228 - -1.3 2,520,228 - -1.8 2,520,228 - -0.3 2,520,308 + MPMX20_02387 0.11 +1.1 2,520,472 - MPMX20_02387 0.22 +0.3 2,520,487 - MPMX20_02387 0.23 +0.4 2,520,487 - MPMX20_02387 0.23 -0.2 2,520,493 + MPMX20_02387 0.23 +0.2 2,520,505 + MPMX20_02387 0.24 +0.9 2,520,554 + MPMX20_02387 0.27 +0.6 2,520,572 - MPMX20_02387 0.28 -1.1 2,520,582 - MPMX20_02387 0.29 +0.6 2,520,612 + MPMX20_02387 0.31 +0.4 2,520,691 - MPMX20_02387 0.36 +0.9 2,520,744 - MPMX20_02387 0.39 -0.3 2,520,939 + MPMX20_02387 0.52 +2.4 2,520,952 + MPMX20_02387 0.53 -0.8 2,521,090 + MPMX20_02387 0.62 +0.1
Or see this region's nucleotide sequence