Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04032

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04031 and MPMX20_04032 are separated by 634 nucleotidesMPMX20_04032 and MPMX20_04033 are separated by 60 nucleotidesMPMX20_04033 and MPMX20_04034 are separated by 21 nucleotides MPMX20_04031: MPMX20_04031 - Tyrosine recombinase XerC, at 4,228,880 to 4,230,343 _04031 MPMX20_04032: MPMX20_04032 - Glycerate 2-kinase, at 4,230,978 to 4,232,123 _04032 MPMX20_04033: MPMX20_04033 - 2-hydroxy-3-oxopropionate reductase, at 4,232,184 to 4,233,074 _04033 MPMX20_04034: MPMX20_04034 - 5-keto-4-deoxy-D-glucarate aldolase, at 4,233,096 to 4,233,866 _04034 Position (kb) 4230 4231 4232 4233Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 4229.990 kb on + strand, within MPMX20_04031at 4229.996 kb on + strand, within MPMX20_04031at 4230.014 kb on - strand, within MPMX20_04031at 4230.027 kb on - strand, within MPMX20_04031at 4230.030 kb on + strand, within MPMX20_04031at 4230.030 kb on + strand, within MPMX20_04031at 4230.030 kb on + strand, within MPMX20_04031at 4230.030 kb on + strand, within MPMX20_04031at 4230.036 kb on + strand, within MPMX20_04031at 4230.036 kb on + strand, within MPMX20_04031at 4230.038 kb on + strand, within MPMX20_04031at 4230.038 kb on + strand, within MPMX20_04031at 4230.038 kb on - strand, within MPMX20_04031at 4230.044 kb on - strand, within MPMX20_04031at 4230.044 kb on - strand, within MPMX20_04031at 4230.046 kb on - strand, within MPMX20_04031at 4230.046 kb on - strand, within MPMX20_04031at 4230.046 kb on - strand, within MPMX20_04031at 4230.082 kb on + strand, within MPMX20_04031at 4230.082 kb on + strand, within MPMX20_04031at 4230.083 kb on + strand, within MPMX20_04031at 4230.090 kb on - strand, within MPMX20_04031at 4230.090 kb on - strand, within MPMX20_04031at 4230.090 kb on - strand, within MPMX20_04031at 4230.095 kb on - strand, within MPMX20_04031at 4230.095 kb on - strand, within MPMX20_04031at 4230.095 kb on - strand, within MPMX20_04031at 4230.116 kb on + strand, within MPMX20_04031at 4230.118 kb on + strand, within MPMX20_04031at 4230.121 kb on + strand, within MPMX20_04031at 4230.121 kb on + strand, within MPMX20_04031at 4230.128 kb on - strand, within MPMX20_04031at 4230.129 kb on - strand, within MPMX20_04031at 4230.129 kb on - strand, within MPMX20_04031at 4230.130 kb on + strand, within MPMX20_04031at 4230.130 kb on + strand, within MPMX20_04031at 4230.130 kb on - strand, within MPMX20_04031at 4230.160 kb on + strand, within MPMX20_04031at 4230.165 kb on + strand, within MPMX20_04031at 4230.165 kb on + strand, within MPMX20_04031at 4230.168 kb on - strand, within MPMX20_04031at 4230.170 kb on + strand, within MPMX20_04031at 4230.170 kb on + strand, within MPMX20_04031at 4230.170 kb on + strand, within MPMX20_04031at 4230.173 kb on - strand, within MPMX20_04031at 4230.173 kb on - strand, within MPMX20_04031at 4230.183 kb on - strand, within MPMX20_04031at 4230.187 kb on + strand, within MPMX20_04031at 4230.187 kb on - strand, within MPMX20_04031at 4230.210 kb on + strandat 4230.226 kb on + strandat 4230.288 kb on + strandat 4230.288 kb on + strandat 4230.288 kb on + strandat 4230.290 kb on + strandat 4230.296 kb on - strandat 4230.296 kb on - strandat 4230.296 kb on - strandat 4230.298 kb on - strandat 4230.298 kb on - strandat 4230.298 kb on - strandat 4230.298 kb on - strandat 4230.298 kb on - strandat 4230.302 kb on + strandat 4230.302 kb on + strandat 4230.306 kb on + strandat 4230.306 kb on + strandat 4230.310 kb on - strandat 4230.335 kb on + strandat 4230.343 kb on - strandat 4230.343 kb on - strandat 4230.343 kb on - strandat 4230.357 kb on + strandat 4230.357 kb on + strandat 4230.358 kb on + strandat 4230.358 kb on + strandat 4230.358 kb on + strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.365 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.366 kb on - strandat 4230.372 kb on - strandat 4230.372 kb on - strandat 4230.377 kb on + strandat 4230.377 kb on - strandat 4230.389 kb on + strandat 4230.389 kb on + strandat 4230.389 kb on + strandat 4230.389 kb on + strandat 4230.389 kb on + strandat 4230.389 kb on + strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.397 kb on - strandat 4230.422 kb on - strandat 4230.430 kb on + strandat 4230.430 kb on + strandat 4230.438 kb on + strandat 4230.438 kb on + strandat 4230.446 kb on - strandat 4230.474 kb on + strandat 4230.482 kb on - strandat 4230.528 kb on + strandat 4230.533 kb on + strandat 4230.541 kb on - strandat 4230.567 kb on + strandat 4230.975 kb on + strandat 4230.982 kb on - strandat 4230.983 kb on - strandat 4230.994 kb on + strandat 4231.065 kb on - strandat 4231.065 kb on - strandat 4231.076 kb on + strandat 4231.094 kb on - strand, within MPMX20_04032at 4231.111 kb on + strand, within MPMX20_04032at 4231.119 kb on - strand, within MPMX20_04032at 4231.132 kb on + strand, within MPMX20_04032at 4231.137 kb on + strand, within MPMX20_04032at 4231.245 kb on + strand, within MPMX20_04032at 4231.245 kb on + strand, within MPMX20_04032at 4231.259 kb on + strand, within MPMX20_04032at 4231.267 kb on - strand, within MPMX20_04032at 4231.272 kb on + strand, within MPMX20_04032at 4231.326 kb on + strand, within MPMX20_04032at 4231.326 kb on + strand, within MPMX20_04032at 4231.334 kb on - strand, within MPMX20_04032at 4231.334 kb on - strand, within MPMX20_04032at 4231.334 kb on - strand, within MPMX20_04032at 4231.334 kb on - strand, within MPMX20_04032at 4231.334 kb on - strand, within MPMX20_04032at 4231.363 kb on - strand, within MPMX20_04032at 4231.396 kb on + strand, within MPMX20_04032at 4231.430 kb on + strand, within MPMX20_04032at 4231.430 kb on + strand, within MPMX20_04032at 4231.440 kb on + strand, within MPMX20_04032at 4231.448 kb on + strand, within MPMX20_04032at 4231.451 kb on - strand, within MPMX20_04032at 4231.451 kb on - strand, within MPMX20_04032at 4231.465 kb on + strand, within MPMX20_04032at 4231.470 kb on + strand, within MPMX20_04032at 4231.521 kb on + strand, within MPMX20_04032at 4231.579 kb on - strand, within MPMX20_04032at 4231.624 kb on - strand, within MPMX20_04032at 4231.632 kb on + strand, within MPMX20_04032at 4231.651 kb on - strand, within MPMX20_04032at 4231.651 kb on - strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.750 kb on + strand, within MPMX20_04032at 4231.758 kb on - strand, within MPMX20_04032at 4231.758 kb on - strand, within MPMX20_04032at 4231.758 kb on - strand, within MPMX20_04032at 4231.758 kb on - strand, within MPMX20_04032at 4231.758 kb on - strand, within MPMX20_04032at 4231.778 kb on + strand, within MPMX20_04032at 4231.784 kb on - strand, within MPMX20_04032at 4231.786 kb on - strand, within MPMX20_04032at 4231.822 kb on + strand, within MPMX20_04032at 4231.832 kb on + strand, within MPMX20_04032at 4231.840 kb on - strand, within MPMX20_04032at 4231.840 kb on - strand, within MPMX20_04032at 4231.889 kb on + strand, within MPMX20_04032at 4231.900 kb on + strand, within MPMX20_04032at 4231.908 kb on - strand, within MPMX20_04032at 4231.908 kb on - strand, within MPMX20_04032at 4231.925 kb on - strand, within MPMX20_04032at 4231.932 kb on - strand, within MPMX20_04032at 4231.945 kb on + strand, within MPMX20_04032at 4231.950 kb on + strand, within MPMX20_04032at 4231.955 kb on + strand, within MPMX20_04032at 4231.959 kb on - strand, within MPMX20_04032at 4232.068 kb on + strandat 4232.125 kb on + strandat 4232.141 kb on + strandat 4232.193 kb on + strandat 4232.194 kb on + strandat 4232.202 kb on - strandat 4232.238 kb on + strandat 4232.238 kb on + strandat 4232.238 kb on + strandat 4232.240 kb on + strandat 4232.245 kb on + strandat 4232.246 kb on - strandat 4232.246 kb on - strandat 4232.250 kb on + strandat 4232.256 kb on - strandat 4232.258 kb on - strandat 4232.258 kb on - strandat 4232.258 kb on - strandat 4232.293 kb on - strand, within MPMX20_04033at 4232.334 kb on + strand, within MPMX20_04033at 4232.351 kb on + strand, within MPMX20_04033at 4232.361 kb on - strand, within MPMX20_04033at 4232.431 kb on + strand, within MPMX20_04033at 4232.437 kb on - strand, within MPMX20_04033at 4232.439 kb on - strand, within MPMX20_04033at 4232.439 kb on - strand, within MPMX20_04033at 4232.458 kb on + strand, within MPMX20_04033at 4232.479 kb on - strand, within MPMX20_04033at 4232.479 kb on - strand, within MPMX20_04033at 4232.622 kb on - strand, within MPMX20_04033at 4232.622 kb on - strand, within MPMX20_04033at 4232.675 kb on + strand, within MPMX20_04033at 4232.689 kb on + strand, within MPMX20_04033at 4232.689 kb on + strand, within MPMX20_04033at 4232.697 kb on - strand, within MPMX20_04033at 4232.697 kb on - strand, within MPMX20_04033at 4232.734 kb on + strand, within MPMX20_04033at 4232.846 kb on + strand, within MPMX20_04033at 4232.869 kb on + strand, within MPMX20_04033at 4232.914 kb on + strand, within MPMX20_04033at 4232.987 kb on + strandat 4233.004 kb on + strandat 4233.005 kb on - strandat 4233.036 kb on - strandat 4233.115 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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4,229,990 + MPMX20_04031 0.76 +1.5
4,229,996 + MPMX20_04031 0.76 -0.5
4,230,014 - MPMX20_04031 0.77 -0.8
4,230,027 - MPMX20_04031 0.78 -0.5
4,230,030 + MPMX20_04031 0.79 +1.3
4,230,030 + MPMX20_04031 0.79 -0.8
4,230,030 + MPMX20_04031 0.79 +0.3
4,230,030 + MPMX20_04031 0.79 -0.2
4,230,036 + MPMX20_04031 0.79 +1.5
4,230,036 + MPMX20_04031 0.79 +0.3
4,230,038 + MPMX20_04031 0.79 +0.8
4,230,038 + MPMX20_04031 0.79 +0.0
4,230,038 - MPMX20_04031 0.79 -0.8
4,230,044 - MPMX20_04031 0.80 +0.7
4,230,044 - MPMX20_04031 0.80 -1.8
4,230,046 - MPMX20_04031 0.80 +0.3
4,230,046 - MPMX20_04031 0.80 +1.3
4,230,046 - MPMX20_04031 0.80 -0.4
4,230,082 + MPMX20_04031 0.82 +0.2
4,230,082 + MPMX20_04031 0.82 +1.5
4,230,083 + MPMX20_04031 0.82 -1.7
4,230,090 - MPMX20_04031 0.83 -0.2
4,230,090 - MPMX20_04031 0.83 -0.8
4,230,090 - MPMX20_04031 0.83 +1.4
4,230,095 - MPMX20_04031 0.83 -0.2
4,230,095 - MPMX20_04031 0.83 -0.3
4,230,095 - MPMX20_04031 0.83 +0.5
4,230,116 + MPMX20_04031 0.84 -1.2
4,230,118 + MPMX20_04031 0.85 -2.2
4,230,121 + MPMX20_04031 0.85 -0.2
4,230,121 + MPMX20_04031 0.85 -1.5
4,230,128 - MPMX20_04031 0.85 +0.7
4,230,129 - MPMX20_04031 0.85 -0.5
4,230,129 - MPMX20_04031 0.85 -0.1
4,230,130 + MPMX20_04031 0.85 -1.1
4,230,130 + MPMX20_04031 0.85 -0.7
4,230,130 - MPMX20_04031 0.85 -0.4
4,230,160 + MPMX20_04031 0.87 +0.6
4,230,165 + MPMX20_04031 0.88 +0.0
4,230,165 + MPMX20_04031 0.88 +0.5
4,230,168 - MPMX20_04031 0.88 -0.0
4,230,170 + MPMX20_04031 0.88 -0.7
4,230,170 + MPMX20_04031 0.88 -1.2
4,230,170 + MPMX20_04031 0.88 +1.3
4,230,173 - MPMX20_04031 0.88 -3.9
4,230,173 - MPMX20_04031 0.88 -1.1
4,230,183 - MPMX20_04031 0.89 -2.8
4,230,187 + MPMX20_04031 0.89 -0.9
4,230,187 - MPMX20_04031 0.89 -0.0
4,230,210 + -1.3
4,230,226 + +1.5
4,230,288 + +1.3
4,230,288 + -1.0
4,230,288 + +0.1
4,230,290 + +0.3
4,230,296 - -0.9
4,230,296 - -0.8
4,230,296 - +0.2
4,230,298 - +0.2
4,230,298 - +0.0
4,230,298 - +0.5
4,230,298 - +1.1
4,230,298 - -1.4
4,230,302 + -1.0
4,230,302 + -0.2
4,230,306 + +0.1
4,230,306 + +0.3
4,230,310 - -0.4
4,230,335 + +0.6
4,230,343 - -0.4
4,230,343 - -0.8
4,230,343 - +3.1
4,230,357 + -1.1
4,230,357 + -2.6
4,230,358 + +0.6
4,230,358 + +2.4
4,230,358 + -0.5
4,230,365 - +0.0
4,230,365 - +1.0
4,230,365 - +0.0
4,230,365 - +1.1
4,230,365 - +0.5
4,230,365 - -0.9
4,230,365 - -1.5
4,230,365 - -2.8
4,230,365 - +1.6
4,230,365 - +0.1
4,230,365 - +0.9
4,230,365 - +1.6
4,230,365 - -1.0
4,230,366 - -0.2
4,230,366 - +2.3
4,230,366 - -0.8
4,230,366 - -0.5
4,230,366 - +0.8
4,230,366 - -1.0
4,230,366 - +0.5
4,230,366 - -2.2
4,230,366 - +0.0
4,230,372 - +2.1
4,230,372 - +0.2
4,230,377 + +0.3
4,230,377 - -0.7
4,230,389 + +0.7
4,230,389 + -0.7
4,230,389 + -1.4
4,230,389 + +0.8
4,230,389 + +0.2
4,230,389 + -0.7
4,230,397 - +0.7
4,230,397 - -2.0
4,230,397 - +0.4
4,230,397 - -1.4
4,230,397 - -1.4
4,230,397 - +0.2
4,230,397 - +2.3
4,230,397 - +0.2
4,230,397 - -1.4
4,230,397 - +0.3
4,230,397 - +0.4
4,230,397 - -1.1
4,230,397 - +0.6
4,230,397 - +1.0
4,230,422 - +1.0
4,230,430 + -0.8
4,230,430 + +1.9
4,230,438 + -0.1
4,230,438 + +0.3
4,230,446 - -0.8
4,230,474 + +0.8
4,230,482 - -0.4
4,230,528 + -0.2
4,230,533 + +0.5
4,230,541 - +0.7
4,230,567 + +0.4
4,230,975 + -1.9
4,230,982 - -1.6
4,230,983 - +1.4
4,230,994 + -0.5
4,231,065 - +0.8
4,231,065 - -0.7
4,231,076 + -0.2
4,231,094 - MPMX20_04032 0.10 -2.2
4,231,111 + MPMX20_04032 0.12 -1.4
4,231,119 - MPMX20_04032 0.12 -0.4
4,231,132 + MPMX20_04032 0.13 -1.5
4,231,137 + MPMX20_04032 0.14 -1.2
4,231,245 + MPMX20_04032 0.23 -0.4
4,231,245 + MPMX20_04032 0.23 -2.0
4,231,259 + MPMX20_04032 0.25 -0.7
4,231,267 - MPMX20_04032 0.25 -1.0
4,231,272 + MPMX20_04032 0.26 -1.0
4,231,326 + MPMX20_04032 0.30 +0.9
4,231,326 + MPMX20_04032 0.30 -2.8
4,231,334 - MPMX20_04032 0.31 -1.5
4,231,334 - MPMX20_04032 0.31 +0.2
4,231,334 - MPMX20_04032 0.31 -0.2
4,231,334 - MPMX20_04032 0.31 -1.5
4,231,334 - MPMX20_04032 0.31 -3.7
4,231,363 - MPMX20_04032 0.34 -1.0
4,231,396 + MPMX20_04032 0.36 +0.0
4,231,430 + MPMX20_04032 0.39 -0.1
4,231,430 + MPMX20_04032 0.39 -1.3
4,231,440 + MPMX20_04032 0.40 +0.1
4,231,448 + MPMX20_04032 0.41 -0.2
4,231,451 - MPMX20_04032 0.41 +0.5
4,231,451 - MPMX20_04032 0.41 -1.0
4,231,465 + MPMX20_04032 0.42 +0.2
4,231,470 + MPMX20_04032 0.43 -0.1
4,231,521 + MPMX20_04032 0.47 +0.3
4,231,579 - MPMX20_04032 0.52 +0.1
4,231,624 - MPMX20_04032 0.56 -0.6
4,231,632 + MPMX20_04032 0.57 +0.2
4,231,651 - MPMX20_04032 0.59 +0.8
4,231,651 - MPMX20_04032 0.59 +2.6
4,231,750 + MPMX20_04032 0.67 -0.7
4,231,750 + MPMX20_04032 0.67 +0.3
4,231,750 + MPMX20_04032 0.67 -1.1
4,231,750 + MPMX20_04032 0.67 -1.0
4,231,750 + MPMX20_04032 0.67 -1.3
4,231,750 + MPMX20_04032 0.67 +1.1
4,231,750 + MPMX20_04032 0.67 -0.2
4,231,758 - MPMX20_04032 0.68 -1.3
4,231,758 - MPMX20_04032 0.68 -0.5
4,231,758 - MPMX20_04032 0.68 +0.5
4,231,758 - MPMX20_04032 0.68 -2.8
4,231,758 - MPMX20_04032 0.68 -1.8
4,231,778 + MPMX20_04032 0.70 -0.7
4,231,784 - MPMX20_04032 0.70 +1.0
4,231,786 - MPMX20_04032 0.71 +0.5
4,231,822 + MPMX20_04032 0.74 +1.1
4,231,832 + MPMX20_04032 0.75 -1.1
4,231,840 - MPMX20_04032 0.75 -1.7
4,231,840 - MPMX20_04032 0.75 +0.9
4,231,889 + MPMX20_04032 0.79 +0.7
4,231,900 + MPMX20_04032 0.80 +0.1
4,231,908 - MPMX20_04032 0.81 -1.2
4,231,908 - MPMX20_04032 0.81 +3.1
4,231,925 - MPMX20_04032 0.83 -2.0
4,231,932 - MPMX20_04032 0.83 +0.2
4,231,945 + MPMX20_04032 0.84 +2.0
4,231,950 + MPMX20_04032 0.85 -1.4
4,231,955 + MPMX20_04032 0.85 -0.8
4,231,959 - MPMX20_04032 0.86 -1.4
4,232,068 + -0.8
4,232,125 + -0.2
4,232,141 + +0.6
4,232,193 + +0.7
4,232,194 + -2.0
4,232,202 - -0.1
4,232,238 + +0.3
4,232,238 + -0.3
4,232,238 + -0.3
4,232,240 + -1.7
4,232,245 + -1.8
4,232,246 - +0.3
4,232,246 - +0.9
4,232,250 + +1.4
4,232,256 - -0.4
4,232,258 - -2.5
4,232,258 - -0.7
4,232,258 - +1.3
4,232,293 - MPMX20_04033 0.12 -0.8
4,232,334 + MPMX20_04033 0.17 -0.1
4,232,351 + MPMX20_04033 0.19 -0.0
4,232,361 - MPMX20_04033 0.20 -0.9
4,232,431 + MPMX20_04033 0.28 -3.5
4,232,437 - MPMX20_04033 0.28 -0.3
4,232,439 - MPMX20_04033 0.29 -2.0
4,232,439 - MPMX20_04033 0.29 -0.0
4,232,458 + MPMX20_04033 0.31 +0.5
4,232,479 - MPMX20_04033 0.33 -1.4
4,232,479 - MPMX20_04033 0.33 -1.6
4,232,622 - MPMX20_04033 0.49 -2.0
4,232,622 - MPMX20_04033 0.49 -0.6
4,232,675 + MPMX20_04033 0.55 -0.6
4,232,689 + MPMX20_04033 0.57 -0.5
4,232,689 + MPMX20_04033 0.57 -0.2
4,232,697 - MPMX20_04033 0.58 -1.5
4,232,697 - MPMX20_04033 0.58 +0.0
4,232,734 + MPMX20_04033 0.62 -1.2
4,232,846 + MPMX20_04033 0.74 -2.6
4,232,869 + MPMX20_04033 0.77 +0.8
4,232,914 + MPMX20_04033 0.82 -0.5
4,232,987 + -0.5
4,233,004 + +0.5
4,233,005 - -1.0
4,233,036 - -0.2
4,233,115 + +0.5

Or see this region's nucleotide sequence