Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03722 and MPMX20_03723 are separated by 32 nucleotides MPMX20_03723 and MPMX20_03724 are separated by 74 nucleotides MPMX20_03724 and MPMX20_03725 are separated by 28 nucleotides MPMX20_03725 and MPMX20_03726 are separated by 10 nucleotides MPMX20_03726 and MPMX20_03727 are separated by 178 nucleotides
MPMX20_03722: MPMX20_03722 - Inner membrane transport protein YqeG, at 3,924,767 to 3,925,996
_03722
MPMX20_03723: MPMX20_03723 - Leucine-responsive regulatory protein, at 3,926,029 to 3,926,544
_03723
MPMX20_03724: MPMX20_03724 - Homoserine/homoserine lactone efflux protein, at 3,926,619 to 3,927,230
_03724
MPMX20_03725: MPMX20_03725 - putative protein YjdJ, at 3,927,259 to 3,927,531
_03725
MPMX20_03726: MPMX20_03726 - hypothetical protein, at 3,927,542 to 3,927,772
_03726
MPMX20_03727: MPMX20_03727 - Sensor histidine kinase CitA, at 3,927,951 to 3,929,588
_03727
Position (kb)
3926
3927
3928 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 3925.797 kb on + strand, within MPMX20_03722 at 3925.797 kb on + strand, within MPMX20_03722 at 3925.805 kb on - strand, within MPMX20_03722 at 3925.807 kb on + strand, within MPMX20_03722 at 3925.812 kb on + strand, within MPMX20_03722 at 3925.812 kb on + strand, within MPMX20_03722 at 3925.820 kb on - strand, within MPMX20_03722 at 3925.820 kb on - strand, within MPMX20_03722 at 3925.820 kb on - strand, within MPMX20_03722 at 3925.820 kb on - strand, within MPMX20_03722 at 3925.950 kb on + strand at 3925.967 kb on - strand at 3926.008 kb on - strand at 3926.068 kb on + strand at 3926.068 kb on + strand at 3926.068 kb on + strand at 3926.261 kb on - strand, within MPMX20_03723 at 3926.346 kb on - strand, within MPMX20_03723 at 3926.413 kb on + strand, within MPMX20_03723 at 3926.414 kb on - strand, within MPMX20_03723 at 3926.419 kb on - strand, within MPMX20_03723 at 3926.462 kb on + strand, within MPMX20_03723 at 3926.462 kb on + strand, within MPMX20_03723 at 3926.470 kb on - strand, within MPMX20_03723 at 3926.500 kb on - strand at 3926.584 kb on + strand at 3926.594 kb on - strand at 3926.607 kb on + strand at 3926.641 kb on + strand at 3926.649 kb on - strand at 3926.698 kb on - strand, within MPMX20_03724 at 3926.698 kb on - strand, within MPMX20_03724 at 3926.747 kb on + strand, within MPMX20_03724 at 3926.747 kb on - strand, within MPMX20_03724 at 3926.753 kb on - strand, within MPMX20_03724 at 3926.898 kb on - strand, within MPMX20_03724 at 3926.898 kb on - strand, within MPMX20_03724 at 3926.937 kb on - strand, within MPMX20_03724 at 3926.968 kb on + strand, within MPMX20_03724 at 3926.976 kb on - strand, within MPMX20_03724 at 3926.976 kb on - strand, within MPMX20_03724 at 3927.048 kb on + strand, within MPMX20_03724 at 3927.048 kb on + strand, within MPMX20_03724 at 3927.048 kb on + strand, within MPMX20_03724 at 3927.048 kb on + strand, within MPMX20_03724 at 3927.065 kb on + strand, within MPMX20_03724 at 3927.085 kb on + strand, within MPMX20_03724 at 3927.085 kb on + strand, within MPMX20_03724 at 3927.085 kb on + strand, within MPMX20_03724 at 3927.085 kb on + strand, within MPMX20_03724 at 3927.093 kb on - strand, within MPMX20_03724 at 3927.093 kb on - strand, within MPMX20_03724 at 3927.093 kb on - strand, within MPMX20_03724 at 3927.093 kb on - strand, within MPMX20_03724 at 3927.095 kb on + strand, within MPMX20_03724 at 3927.311 kb on + strand, within MPMX20_03725 at 3927.370 kb on - strand, within MPMX20_03725 at 3927.387 kb on + strand, within MPMX20_03725 at 3927.388 kb on + strand, within MPMX20_03725 at 3927.395 kb on - strand, within MPMX20_03725 at 3927.395 kb on - strand, within MPMX20_03725 at 3927.408 kb on + strand, within MPMX20_03725 at 3927.418 kb on + strand, within MPMX20_03725 at 3927.426 kb on + strand, within MPMX20_03725 at 3927.433 kb on + strand, within MPMX20_03725 at 3927.461 kb on - strand, within MPMX20_03725 at 3927.476 kb on + strand, within MPMX20_03725 at 3927.483 kb on + strand, within MPMX20_03725 at 3927.498 kb on + strand, within MPMX20_03725 at 3927.555 kb on + strand at 3927.557 kb on + strand at 3927.575 kb on - strand, within MPMX20_03726 at 3927.578 kb on + strand, within MPMX20_03726 at 3927.586 kb on - strand, within MPMX20_03726 at 3927.586 kb on - strand, within MPMX20_03726 at 3927.598 kb on - strand, within MPMX20_03726 at 3927.622 kb on + strand, within MPMX20_03726 at 3927.645 kb on + strand, within MPMX20_03726 at 3927.663 kb on - strand, within MPMX20_03726 at 3927.663 kb on - strand, within MPMX20_03726 at 3927.687 kb on + strand, within MPMX20_03726 at 3927.710 kb on - strand, within MPMX20_03726 at 3927.710 kb on - strand, within MPMX20_03726 at 3927.732 kb on + strand, within MPMX20_03726 at 3927.732 kb on + strand, within MPMX20_03726 at 3927.732 kb on + strand, within MPMX20_03726 at 3927.740 kb on - strand, within MPMX20_03726 at 3927.740 kb on - strand, within MPMX20_03726 at 3927.755 kb on + strand at 3927.755 kb on + strand at 3927.755 kb on + strand at 3927.763 kb on - strand at 3927.763 kb on - strand at 3927.802 kb on + strand at 3927.808 kb on + strand at 3927.808 kb on + strand at 3927.808 kb on + strand at 3927.809 kb on + strand at 3927.809 kb on + strand at 3927.810 kb on - strand at 3927.810 kb on - strand at 3927.814 kb on + strand at 3927.814 kb on + strand at 3927.814 kb on + strand at 3927.815 kb on - strand at 3927.817 kb on - strand at 3927.817 kb on - strand at 3927.817 kb on - strand at 3927.822 kb on - strand at 3927.822 kb on - strand at 3927.822 kb on - strand at 3927.822 kb on - strand at 3927.834 kb on - strand at 3927.859 kb on + strand at 3927.867 kb on - strand at 3927.907 kb on + strand at 3927.907 kb on + strand at 3927.907 kb on + strand at 3927.907 kb on + strand at 3927.907 kb on + strand at 3927.910 kb on - strand at 3927.912 kb on + strand at 3927.912 kb on + strand at 3927.912 kb on + strand at 3927.912 kb on + strand at 3927.915 kb on - strand at 3927.920 kb on - strand at 3927.921 kb on + strand at 3927.921 kb on + strand at 3927.926 kb on + strand at 3927.929 kb on - strand at 3927.929 kb on - strand at 3927.929 kb on - strand at 3927.934 kb on - strand at 3927.934 kb on - strand at 3927.935 kb on + strand at 3927.939 kb on + strand at 3927.943 kb on - strand at 3927.943 kb on - strand at 3927.995 kb on + strand at 3927.995 kb on + strand at 3928.003 kb on + strand at 3928.003 kb on + strand at 3928.011 kb on - strand at 3928.020 kb on + strand at 3928.025 kb on + strand at 3928.028 kb on - strand at 3928.033 kb on - strand at 3928.033 kb on - strand at 3928.033 kb on - strand at 3928.033 kb on - strand at 3928.038 kb on - strand at 3928.072 kb on + strand at 3928.073 kb on - strand at 3928.080 kb on - strand at 3928.085 kb on + strand at 3928.092 kb on + strand at 3928.095 kb on - strand at 3928.123 kb on - strand, within MPMX20_03727 at 3928.152 kb on + strand, within MPMX20_03727 at 3928.168 kb on + strand, within MPMX20_03727 at 3928.172 kb on + strand, within MPMX20_03727 at 3928.178 kb on + strand, within MPMX20_03727 at 3928.185 kb on - strand, within MPMX20_03727 at 3928.187 kb on + strand, within MPMX20_03727 at 3928.187 kb on + strand, within MPMX20_03727 at 3928.195 kb on - strand, within MPMX20_03727 at 3928.204 kb on + strand, within MPMX20_03727 at 3928.212 kb on - strand, within MPMX20_03727 at 3928.225 kb on + strand, within MPMX20_03727 at 3928.225 kb on + strand, within MPMX20_03727 at 3928.225 kb on + strand, within MPMX20_03727
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 3,925,797 + MPMX20_03722 0.84 -0.1 3,925,797 + MPMX20_03722 0.84 +0.2 3,925,805 - MPMX20_03722 0.84 +1.9 3,925,807 + MPMX20_03722 0.85 -0.0 3,925,812 + MPMX20_03722 0.85 +0.2 3,925,812 + MPMX20_03722 0.85 +0.8 3,925,820 - MPMX20_03722 0.86 +1.1 3,925,820 - MPMX20_03722 0.86 +1.3 3,925,820 - MPMX20_03722 0.86 +1.6 3,925,820 - MPMX20_03722 0.86 -1.4 3,925,950 + +1.0 3,925,967 - +0.8 3,926,008 - +1.2 3,926,068 + +6.8 3,926,068 + +7.8 3,926,068 + +6.8 3,926,261 - MPMX20_03723 0.45 +7.6 3,926,346 - MPMX20_03723 0.61 +6.2 3,926,413 + MPMX20_03723 0.74 +7.1 3,926,414 - MPMX20_03723 0.75 +7.3 3,926,419 - MPMX20_03723 0.76 +6.7 3,926,462 + MPMX20_03723 0.84 +7.1 3,926,462 + MPMX20_03723 0.84 +6.2 3,926,470 - MPMX20_03723 0.85 +7.6 3,926,500 - +6.6 3,926,584 + +4.5 3,926,594 - +7.4 3,926,607 + +6.1 3,926,641 + +7.9 3,926,649 - +8.3 3,926,698 - MPMX20_03724 0.13 +4.8 3,926,698 - MPMX20_03724 0.13 +7.1 3,926,747 + MPMX20_03724 0.21 +7.5 3,926,747 - MPMX20_03724 0.21 +6.7 3,926,753 - MPMX20_03724 0.22 +6.3 3,926,898 - MPMX20_03724 0.46 +7.2 3,926,898 - MPMX20_03724 0.46 +7.8 3,926,937 - MPMX20_03724 0.52 +7.8 3,926,968 + MPMX20_03724 0.57 +7.0 3,926,976 - MPMX20_03724 0.58 +6.5 3,926,976 - MPMX20_03724 0.58 +7.1 3,927,048 + MPMX20_03724 0.70 +5.6 3,927,048 + MPMX20_03724 0.70 -0.7 3,927,048 + MPMX20_03724 0.70 +6.0 3,927,048 + MPMX20_03724 0.70 +8.2 3,927,065 + MPMX20_03724 0.73 +8.4 3,927,085 + MPMX20_03724 0.76 +6.1 3,927,085 + MPMX20_03724 0.76 +6.1 3,927,085 + MPMX20_03724 0.76 +6.5 3,927,085 + MPMX20_03724 0.76 +6.7 3,927,093 - MPMX20_03724 0.77 +8.4 3,927,093 - MPMX20_03724 0.77 +7.9 3,927,093 - MPMX20_03724 0.77 +7.4 3,927,093 - MPMX20_03724 0.77 +6.9 3,927,095 + MPMX20_03724 0.78 +5.5 3,927,311 + MPMX20_03725 0.19 +0.4 3,927,370 - MPMX20_03725 0.41 +0.2 3,927,387 + MPMX20_03725 0.47 -4.0 3,927,388 + MPMX20_03725 0.47 -0.9 3,927,395 - MPMX20_03725 0.50 -0.0 3,927,395 - MPMX20_03725 0.50 -0.2 3,927,408 + MPMX20_03725 0.55 +1.1 3,927,418 + MPMX20_03725 0.58 +1.9 3,927,426 + MPMX20_03725 0.61 +0.1 3,927,433 + MPMX20_03725 0.64 +0.6 3,927,461 - MPMX20_03725 0.74 +0.4 3,927,476 + MPMX20_03725 0.79 +0.2 3,927,483 + MPMX20_03725 0.82 +1.0 3,927,498 + MPMX20_03725 0.88 -0.2 3,927,555 + +0.8 3,927,557 + +0.6 3,927,575 - MPMX20_03726 0.14 -1.4 3,927,578 + MPMX20_03726 0.16 -0.2 3,927,586 - MPMX20_03726 0.19 +0.9 3,927,586 - MPMX20_03726 0.19 -0.2 3,927,598 - MPMX20_03726 0.24 +1.1 3,927,622 + MPMX20_03726 0.35 -1.0 3,927,645 + MPMX20_03726 0.45 -0.2 3,927,663 - MPMX20_03726 0.52 +1.4 3,927,663 - MPMX20_03726 0.52 -0.9 3,927,687 + MPMX20_03726 0.63 -0.6 3,927,710 - MPMX20_03726 0.73 +1.0 3,927,710 - MPMX20_03726 0.73 -1.1 3,927,732 + MPMX20_03726 0.82 -0.6 3,927,732 + MPMX20_03726 0.82 -1.7 3,927,732 + MPMX20_03726 0.82 -2.5 3,927,740 - MPMX20_03726 0.86 +0.3 3,927,740 - MPMX20_03726 0.86 +0.7 3,927,755 + +2.2 3,927,755 + +0.0 3,927,755 + +0.3 3,927,763 - +0.3 3,927,763 - -1.8 3,927,802 + -1.3 3,927,808 + -0.2 3,927,808 + -2.6 3,927,808 + -0.4 3,927,809 + +0.5 3,927,809 + +1.3 3,927,810 - +1.2 3,927,810 - -1.0 3,927,814 + +1.1 3,927,814 + -0.9 3,927,814 + +0.8 3,927,815 - +0.6 3,927,817 - +1.1 3,927,817 - +0.9 3,927,817 - +1.5 3,927,822 - -0.4 3,927,822 - -1.6 3,927,822 - -3.2 3,927,822 - -0.3 3,927,834 - -0.4 3,927,859 + +0.6 3,927,867 - +0.5 3,927,907 + -0.3 3,927,907 + -1.2 3,927,907 + +1.2 3,927,907 + -0.6 3,927,907 + -0.5 3,927,910 - -1.4 3,927,912 + -1.2 3,927,912 + +1.4 3,927,912 + -3.1 3,927,912 + -1.2 3,927,915 - +1.2 3,927,920 - +0.3 3,927,921 + -0.0 3,927,921 + -1.2 3,927,926 + -0.8 3,927,929 - +0.6 3,927,929 - -1.1 3,927,929 - +0.2 3,927,934 - +0.3 3,927,934 - +0.6 3,927,935 + -0.3 3,927,939 + +0.7 3,927,943 - +2.2 3,927,943 - -1.2 3,927,995 + -0.8 3,927,995 + +1.7 3,928,003 + -0.6 3,928,003 + -0.3 3,928,011 - +0.6 3,928,020 + -0.1 3,928,025 + +0.1 3,928,028 - -1.4 3,928,033 - +0.1 3,928,033 - -0.3 3,928,033 - -1.2 3,928,033 - -1.1 3,928,038 - -1.1 3,928,072 + -1.3 3,928,073 - +0.5 3,928,080 - -1.9 3,928,085 + +0.0 3,928,092 + +0.9 3,928,095 - -2.4 3,928,123 - MPMX20_03727 0.11 +1.5 3,928,152 + MPMX20_03727 0.12 -2.3 3,928,168 + MPMX20_03727 0.13 -1.7 3,928,172 + MPMX20_03727 0.13 +1.1 3,928,178 + MPMX20_03727 0.14 -0.2 3,928,185 - MPMX20_03727 0.14 +1.2 3,928,187 + MPMX20_03727 0.14 -0.7 3,928,187 + MPMX20_03727 0.14 +0.5 3,928,195 - MPMX20_03727 0.15 +1.0 3,928,204 + MPMX20_03727 0.15 -0.5 3,928,212 - MPMX20_03727 0.16 -1.8 3,928,225 + MPMX20_03727 0.17 +0.4 3,928,225 + MPMX20_03727 0.17 +0.2 3,928,225 + MPMX20_03727 0.17 -0.5
Or see this region's nucleotide sequence