Experiment: L-Methionine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01041 and MPMX20_01042 are separated by 222 nucleotides MPMX20_01042 and MPMX20_01043 are separated by 35 nucleotides MPMX20_01043 and MPMX20_01044 are separated by 75 nucleotides
MPMX20_01041: MPMX20_01041 - Multidrug resistance-like ATP-binding protein MdlB, at 1,096,893 to 1,098,674
_01041
MPMX20_01042: MPMX20_01042 - Nitrogen regulatory protein P-II 2, at 1,098,897 to 1,099,235
_01042
MPMX20_01043: MPMX20_01043 - Ammonia channel, at 1,099,271 to 1,100,557
_01043
MPMX20_01044: MPMX20_01044 - Acyl-CoA thioesterase 2, at 1,100,633 to 1,101,493
_01044
Position (kb)
1099
1100
1101 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1098.282 kb on + strand, within MPMX20_01041 at 1098.313 kb on + strand, within MPMX20_01041 at 1098.320 kb on - strand, within MPMX20_01041 at 1098.341 kb on + strand, within MPMX20_01041 at 1098.429 kb on - strand, within MPMX20_01041 at 1098.524 kb on - strand at 1098.545 kb on + strand at 1098.557 kb on - strand at 1098.573 kb on - strand at 1098.905 kb on + strand at 1099.039 kb on + strand, within MPMX20_01042 at 1099.039 kb on + strand, within MPMX20_01042 at 1099.041 kb on + strand, within MPMX20_01042 at 1099.041 kb on + strand, within MPMX20_01042 at 1099.044 kb on + strand, within MPMX20_01042 at 1099.047 kb on - strand, within MPMX20_01042 at 1099.059 kb on - strand, within MPMX20_01042 at 1099.230 kb on + strand at 1099.251 kb on + strand at 1099.251 kb on + strand at 1099.253 kb on + strand at 1099.259 kb on - strand at 1099.261 kb on - strand at 1099.261 kb on - strand at 1099.313 kb on + strand at 1099.391 kb on - strand at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.426 kb on + strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.434 kb on - strand, within MPMX20_01043 at 1099.444 kb on - strand, within MPMX20_01043 at 1099.506 kb on - strand, within MPMX20_01043 at 1099.506 kb on - strand, within MPMX20_01043 at 1099.524 kb on - strand, within MPMX20_01043 at 1099.723 kb on - strand, within MPMX20_01043 at 1099.725 kb on + strand, within MPMX20_01043 at 1099.743 kb on - strand, within MPMX20_01043 at 1099.743 kb on - strand, within MPMX20_01043 at 1099.743 kb on - strand, within MPMX20_01043 at 1099.760 kb on - strand, within MPMX20_01043 at 1099.774 kb on + strand, within MPMX20_01043 at 1099.816 kb on - strand, within MPMX20_01043 at 1099.835 kb on + strand, within MPMX20_01043 at 1099.838 kb on - strand, within MPMX20_01043 at 1099.848 kb on - strand, within MPMX20_01043 at 1099.869 kb on + strand, within MPMX20_01043 at 1099.877 kb on - strand, within MPMX20_01043 at 1099.877 kb on - strand, within MPMX20_01043 at 1099.903 kb on - strand, within MPMX20_01043 at 1099.927 kb on - strand, within MPMX20_01043 at 1099.937 kb on + strand, within MPMX20_01043 at 1099.962 kb on + strand, within MPMX20_01043 at 1100.018 kb on + strand, within MPMX20_01043 at 1100.023 kb on + strand, within MPMX20_01043 at 1100.026 kb on - strand, within MPMX20_01043 at 1100.044 kb on + strand, within MPMX20_01043 at 1100.047 kb on - strand, within MPMX20_01043 at 1100.054 kb on + strand, within MPMX20_01043 at 1100.075 kb on - strand, within MPMX20_01043 at 1100.095 kb on + strand, within MPMX20_01043 at 1100.095 kb on + strand, within MPMX20_01043 at 1100.101 kb on + strand, within MPMX20_01043 at 1100.103 kb on - strand, within MPMX20_01043 at 1100.121 kb on + strand, within MPMX20_01043 at 1100.151 kb on - strand, within MPMX20_01043 at 1100.154 kb on + strand, within MPMX20_01043 at 1100.252 kb on - strand, within MPMX20_01043 at 1100.252 kb on - strand, within MPMX20_01043 at 1100.259 kb on + strand, within MPMX20_01043 at 1100.351 kb on + strand, within MPMX20_01043 at 1100.409 kb on - strand, within MPMX20_01043 at 1100.454 kb on + strand at 1100.521 kb on - strand at 1100.521 kb on - strand at 1100.580 kb on - strand at 1100.580 kb on - strand at 1100.615 kb on - strand at 1100.625 kb on + strand at 1100.633 kb on - strand at 1100.633 kb on - strand at 1100.655 kb on - strand at 1100.657 kb on + strand at 1100.694 kb on + strand at 1100.694 kb on + strand at 1100.694 kb on + strand at 1100.702 kb on - strand at 1100.744 kb on - strand, within MPMX20_01044 at 1100.759 kb on - strand, within MPMX20_01044 at 1100.759 kb on - strand, within MPMX20_01044 at 1100.759 kb on - strand, within MPMX20_01044 at 1100.775 kb on - strand, within MPMX20_01044 at 1100.784 kb on + strand, within MPMX20_01044 at 1100.847 kb on + strand, within MPMX20_01044 at 1100.999 kb on + strand, within MPMX20_01044 at 1101.046 kb on + strand, within MPMX20_01044 at 1101.053 kb on - strand, within MPMX20_01044 at 1101.119 kb on - strand, within MPMX20_01044 at 1101.202 kb on - strand, within MPMX20_01044 at 1101.214 kb on + strand, within MPMX20_01044 at 1101.229 kb on + strand, within MPMX20_01044 at 1101.237 kb on - strand, within MPMX20_01044 at 1101.262 kb on + strand, within MPMX20_01044 at 1101.347 kb on + strand, within MPMX20_01044 at 1101.357 kb on - strand, within MPMX20_01044 at 1101.405 kb on - strand, within MPMX20_01044 at 1101.423 kb on + strand at 1101.481 kb on + strand at 1101.481 kb on + strand at 1101.481 kb on + strand at 1101.481 kb on + strand at 1101.501 kb on - strand at 1101.529 kb on - strand at 1101.531 kb on + strand at 1101.533 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Methionine (N) remove 1,098,282 + MPMX20_01041 0.78 -1.2 1,098,313 + MPMX20_01041 0.80 -1.3 1,098,320 - MPMX20_01041 0.80 +0.4 1,098,341 + MPMX20_01041 0.81 -1.1 1,098,429 - MPMX20_01041 0.86 -0.1 1,098,524 - +0.0 1,098,545 + -0.2 1,098,557 - -0.6 1,098,573 - +0.5 1,098,905 + +0.8 1,099,039 + MPMX20_01042 0.42 -0.1 1,099,039 + MPMX20_01042 0.42 +0.9 1,099,041 + MPMX20_01042 0.42 +0.6 1,099,041 + MPMX20_01042 0.42 -0.3 1,099,044 + MPMX20_01042 0.43 +0.3 1,099,047 - MPMX20_01042 0.44 -0.6 1,099,059 - MPMX20_01042 0.48 -0.8 1,099,230 + +0.8 1,099,251 + -2.5 1,099,251 + -2.2 1,099,253 + +0.7 1,099,259 - -1.0 1,099,261 - -0.3 1,099,261 - -0.4 1,099,313 + -1.1 1,099,391 - -0.8 1,099,426 + MPMX20_01043 0.12 -0.2 1,099,426 + MPMX20_01043 0.12 -2.9 1,099,426 + MPMX20_01043 0.12 -1.0 1,099,426 + MPMX20_01043 0.12 -0.3 1,099,426 + MPMX20_01043 0.12 -0.6 1,099,426 + MPMX20_01043 0.12 -0.1 1,099,426 + MPMX20_01043 0.12 -2.0 1,099,426 + MPMX20_01043 0.12 -3.1 1,099,434 - MPMX20_01043 0.13 -3.6 1,099,434 - MPMX20_01043 0.13 -0.7 1,099,434 - MPMX20_01043 0.13 +0.2 1,099,434 - MPMX20_01043 0.13 -1.5 1,099,434 - MPMX20_01043 0.13 -1.0 1,099,434 - MPMX20_01043 0.13 -0.1 1,099,434 - MPMX20_01043 0.13 -2.8 1,099,434 - MPMX20_01043 0.13 +0.6 1,099,444 - MPMX20_01043 0.13 -2.6 1,099,506 - MPMX20_01043 0.18 -0.8 1,099,506 - MPMX20_01043 0.18 -0.7 1,099,524 - MPMX20_01043 0.20 +0.2 1,099,723 - MPMX20_01043 0.35 -1.0 1,099,725 + MPMX20_01043 0.35 -0.7 1,099,743 - MPMX20_01043 0.37 -0.1 1,099,743 - MPMX20_01043 0.37 -2.1 1,099,743 - MPMX20_01043 0.37 -2.4 1,099,760 - MPMX20_01043 0.38 -0.8 1,099,774 + MPMX20_01043 0.39 -1.8 1,099,816 - MPMX20_01043 0.42 +0.7 1,099,835 + MPMX20_01043 0.44 -2.2 1,099,838 - MPMX20_01043 0.44 -2.2 1,099,848 - MPMX20_01043 0.45 -1.1 1,099,869 + MPMX20_01043 0.46 -3.3 1,099,877 - MPMX20_01043 0.47 -0.6 1,099,877 - MPMX20_01043 0.47 -0.3 1,099,903 - MPMX20_01043 0.49 -0.7 1,099,927 - MPMX20_01043 0.51 -0.1 1,099,937 + MPMX20_01043 0.52 +0.0 1,099,962 + MPMX20_01043 0.54 -2.0 1,100,018 + MPMX20_01043 0.58 -2.1 1,100,023 + MPMX20_01043 0.58 -0.9 1,100,026 - MPMX20_01043 0.59 -0.1 1,100,044 + MPMX20_01043 0.60 -1.4 1,100,047 - MPMX20_01043 0.60 +0.2 1,100,054 + MPMX20_01043 0.61 -2.2 1,100,075 - MPMX20_01043 0.62 -1.3 1,100,095 + MPMX20_01043 0.64 -3.5 1,100,095 + MPMX20_01043 0.64 -0.1 1,100,101 + MPMX20_01043 0.64 -1.3 1,100,103 - MPMX20_01043 0.65 -1.3 1,100,121 + MPMX20_01043 0.66 +0.5 1,100,151 - MPMX20_01043 0.68 -1.3 1,100,154 + MPMX20_01043 0.69 -3.3 1,100,252 - MPMX20_01043 0.76 -2.3 1,100,252 - MPMX20_01043 0.76 -1.0 1,100,259 + MPMX20_01043 0.77 +0.4 1,100,351 + MPMX20_01043 0.84 -2.2 1,100,409 - MPMX20_01043 0.88 -0.5 1,100,454 + -2.1 1,100,521 - -1.9 1,100,521 - +0.2 1,100,580 - +0.5 1,100,580 - +0.3 1,100,615 - -1.1 1,100,625 + -0.6 1,100,633 - +1.5 1,100,633 - +0.8 1,100,655 - -1.0 1,100,657 + -0.6 1,100,694 + -0.8 1,100,694 + -2.2 1,100,694 + -0.6 1,100,702 - -0.5 1,100,744 - MPMX20_01044 0.13 -0.0 1,100,759 - MPMX20_01044 0.15 -0.3 1,100,759 - MPMX20_01044 0.15 +0.6 1,100,759 - MPMX20_01044 0.15 -1.3 1,100,775 - MPMX20_01044 0.16 -1.1 1,100,784 + MPMX20_01044 0.18 +0.0 1,100,847 + MPMX20_01044 0.25 -0.8 1,100,999 + MPMX20_01044 0.43 +0.3 1,101,046 + MPMX20_01044 0.48 +0.2 1,101,053 - MPMX20_01044 0.49 -1.0 1,101,119 - MPMX20_01044 0.56 -1.6 1,101,202 - MPMX20_01044 0.66 +0.9 1,101,214 + MPMX20_01044 0.67 +1.4 1,101,229 + MPMX20_01044 0.69 +0.4 1,101,237 - MPMX20_01044 0.70 -1.8 1,101,262 + MPMX20_01044 0.73 +0.0 1,101,347 + MPMX20_01044 0.83 -0.7 1,101,357 - MPMX20_01044 0.84 -2.5 1,101,405 - MPMX20_01044 0.90 +1.3 1,101,423 + +0.9 1,101,481 + +2.0 1,101,481 + +1.2 1,101,481 + -2.3 1,101,481 + -0.8 1,101,501 - -0.3 1,101,529 - -0.9 1,101,531 + -0.2 1,101,533 + -1.6
Or see this region's nucleotide sequence