Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00084

Experiment: L-Methionine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00083 and MPMX20_00084 are separated by 2 nucleotidesMPMX20_00084 and MPMX20_00085 are separated by 3 nucleotidesMPMX20_00085 and MPMX20_00086 are separated by 4 nucleotides MPMX20_00083: MPMX20_00083 - Sodium/glutamate symporter, at 84,752 to 85,954 _00083 MPMX20_00084: MPMX20_00084 - ATP-dependent DNA helicase RecG, at 85,957 to 88,038 _00084 MPMX20_00085: MPMX20_00085 - tRNA (guanosine(18)-2'-O)-methyltransferase, at 88,042 to 88,731 _00085 MPMX20_00086: MPMX20_00086 - Bifunctional (p)ppGpp synthase/hydrolase SpoT, at 88,736 to 90,850 _00086 Position (kb) 85 86 87 88 89Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 84.981 kb on + strand, within MPMX20_00083at 84.981 kb on + strand, within MPMX20_00083at 84.989 kb on - strand, within MPMX20_00083at 84.989 kb on - strand, within MPMX20_00083at 85.043 kb on - strand, within MPMX20_00083at 85.043 kb on - strand, within MPMX20_00083at 85.186 kb on - strand, within MPMX20_00083at 85.189 kb on + strand, within MPMX20_00083at 85.237 kb on + strand, within MPMX20_00083at 85.237 kb on + strand, within MPMX20_00083at 85.259 kb on + strand, within MPMX20_00083at 85.262 kb on - strand, within MPMX20_00083at 85.381 kb on + strand, within MPMX20_00083at 85.381 kb on + strand, within MPMX20_00083at 85.439 kb on - strand, within MPMX20_00083at 85.486 kb on + strand, within MPMX20_00083at 85.490 kb on + strand, within MPMX20_00083at 85.624 kb on + strand, within MPMX20_00083at 85.629 kb on + strand, within MPMX20_00083at 85.656 kb on - strand, within MPMX20_00083at 85.696 kb on + strand, within MPMX20_00083at 85.713 kb on - strand, within MPMX20_00083at 85.787 kb on + strand, within MPMX20_00083at 85.879 kb on - strandat 85.931 kb on - strandat 86.024 kb on - strandat 86.024 kb on - strandat 86.024 kb on - strandat 86.316 kb on + strand, within MPMX20_00084at 86.372 kb on - strand, within MPMX20_00084at 86.461 kb on - strand, within MPMX20_00084at 86.477 kb on + strand, within MPMX20_00084at 86.525 kb on + strand, within MPMX20_00084at 86.547 kb on + strand, within MPMX20_00084at 86.555 kb on - strand, within MPMX20_00084at 86.584 kb on - strand, within MPMX20_00084at 86.584 kb on - strand, within MPMX20_00084at 86.654 kb on - strand, within MPMX20_00084at 86.670 kb on + strand, within MPMX20_00084at 86.738 kb on - strand, within MPMX20_00084at 86.753 kb on - strand, within MPMX20_00084at 86.798 kb on - strand, within MPMX20_00084at 86.831 kb on - strand, within MPMX20_00084at 86.839 kb on + strand, within MPMX20_00084at 86.880 kb on + strand, within MPMX20_00084at 86.949 kb on + strand, within MPMX20_00084at 86.962 kb on + strand, within MPMX20_00084at 86.987 kb on + strand, within MPMX20_00084at 86.987 kb on + strand, within MPMX20_00084at 86.997 kb on + strand, within MPMX20_00084at 87.020 kb on - strand, within MPMX20_00084at 87.037 kb on + strand, within MPMX20_00084at 87.040 kb on + strand, within MPMX20_00084at 87.101 kb on - strand, within MPMX20_00084at 87.151 kb on + strand, within MPMX20_00084at 87.219 kb on + strand, within MPMX20_00084at 87.284 kb on + strand, within MPMX20_00084at 87.292 kb on - strand, within MPMX20_00084at 87.339 kb on + strand, within MPMX20_00084at 87.363 kb on + strand, within MPMX20_00084at 87.371 kb on - strand, within MPMX20_00084at 87.404 kb on + strand, within MPMX20_00084at 87.411 kb on + strand, within MPMX20_00084at 87.441 kb on - strand, within MPMX20_00084at 87.441 kb on - strand, within MPMX20_00084at 87.457 kb on - strand, within MPMX20_00084at 87.463 kb on + strand, within MPMX20_00084at 87.463 kb on + strand, within MPMX20_00084at 87.464 kb on + strand, within MPMX20_00084at 87.493 kb on - strand, within MPMX20_00084at 87.511 kb on + strand, within MPMX20_00084at 87.552 kb on + strand, within MPMX20_00084at 87.609 kb on + strand, within MPMX20_00084at 87.617 kb on - strand, within MPMX20_00084at 87.627 kb on - strand, within MPMX20_00084at 87.689 kb on + strand, within MPMX20_00084at 87.694 kb on + strand, within MPMX20_00084at 87.694 kb on + strand, within MPMX20_00084at 87.694 kb on + strand, within MPMX20_00084at 87.697 kb on - strand, within MPMX20_00084at 87.697 kb on - strand, within MPMX20_00084at 87.702 kb on + strand, within MPMX20_00084at 87.702 kb on - strand, within MPMX20_00084at 87.702 kb on - strand, within MPMX20_00084at 87.792 kb on - strand, within MPMX20_00084at 87.794 kb on + strand, within MPMX20_00084at 87.816 kb on + strand, within MPMX20_00084at 87.829 kb on + strand, within MPMX20_00084at 87.829 kb on + strand, within MPMX20_00084at 87.829 kb on + strand, within MPMX20_00084at 87.837 kb on - strandat 87.837 kb on - strandat 88.062 kb on - strandat 88.152 kb on - strand, within MPMX20_00085at 88.256 kb on - strand, within MPMX20_00085at 88.284 kb on + strand, within MPMX20_00085at 88.390 kb on + strand, within MPMX20_00085at 88.448 kb on - strand, within MPMX20_00085at 88.599 kb on + strand, within MPMX20_00085at 88.601 kb on + strand, within MPMX20_00085at 88.607 kb on - strand, within MPMX20_00085at 88.607 kb on - strand, within MPMX20_00085at 88.607 kb on - strand, within MPMX20_00085at 88.607 kb on - strand, within MPMX20_00085at 88.607 kb on - strand, within MPMX20_00085at 88.609 kb on - strand, within MPMX20_00085at 88.636 kb on + strand, within MPMX20_00085at 88.656 kb on + strand, within MPMX20_00085at 88.656 kb on + strand, within MPMX20_00085at 88.687 kb on - strandat 88.922 kb on + strandat 88.987 kb on + strand, within MPMX20_00086at 89.012 kb on - strand, within MPMX20_00086

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Methionine (N)
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84,981 + MPMX20_00083 0.19 -1.6
84,981 + MPMX20_00083 0.19 -0.3
84,989 - MPMX20_00083 0.20 +1.4
84,989 - MPMX20_00083 0.20 -1.4
85,043 - MPMX20_00083 0.24 +0.3
85,043 - MPMX20_00083 0.24 +0.5
85,186 - MPMX20_00083 0.36 +0.8
85,189 + MPMX20_00083 0.36 +0.3
85,237 + MPMX20_00083 0.40 -1.7
85,237 + MPMX20_00083 0.40 -1.8
85,259 + MPMX20_00083 0.42 +0.2
85,262 - MPMX20_00083 0.42 -2.0
85,381 + MPMX20_00083 0.52 -0.1
85,381 + MPMX20_00083 0.52 -1.1
85,439 - MPMX20_00083 0.57 +0.5
85,486 + MPMX20_00083 0.61 -1.3
85,490 + MPMX20_00083 0.61 -0.3
85,624 + MPMX20_00083 0.72 -0.2
85,629 + MPMX20_00083 0.73 -0.4
85,656 - MPMX20_00083 0.75 +0.3
85,696 + MPMX20_00083 0.78 -0.8
85,713 - MPMX20_00083 0.80 -3.1
85,787 + MPMX20_00083 0.86 -0.6
85,879 - -0.0
85,931 - -0.0
86,024 - -1.2
86,024 - +0.9
86,024 - -1.1
86,316 + MPMX20_00084 0.17 -2.7
86,372 - MPMX20_00084 0.20 -1.5
86,461 - MPMX20_00084 0.24 +0.2
86,477 + MPMX20_00084 0.25 -2.4
86,525 + MPMX20_00084 0.27 +2.1
86,547 + MPMX20_00084 0.28 -3.2
86,555 - MPMX20_00084 0.29 -0.8
86,584 - MPMX20_00084 0.30 -1.2
86,584 - MPMX20_00084 0.30 -2.9
86,654 - MPMX20_00084 0.33 +0.5
86,670 + MPMX20_00084 0.34 +0.2
86,738 - MPMX20_00084 0.38 -1.9
86,753 - MPMX20_00084 0.38 -2.3
86,798 - MPMX20_00084 0.40 -1.0
86,831 - MPMX20_00084 0.42 +0.9
86,839 + MPMX20_00084 0.42 -0.7
86,880 + MPMX20_00084 0.44 -0.5
86,949 + MPMX20_00084 0.48 +1.2
86,962 + MPMX20_00084 0.48 +1.8
86,987 + MPMX20_00084 0.49 -3.9
86,987 + MPMX20_00084 0.49 -0.6
86,997 + MPMX20_00084 0.50 -0.8
87,020 - MPMX20_00084 0.51 -2.7
87,037 + MPMX20_00084 0.52 +0.9
87,040 + MPMX20_00084 0.52 -3.3
87,101 - MPMX20_00084 0.55 +0.0
87,151 + MPMX20_00084 0.57 -1.3
87,219 + MPMX20_00084 0.61 +2.0
87,284 + MPMX20_00084 0.64 -1.2
87,292 - MPMX20_00084 0.64 -1.2
87,339 + MPMX20_00084 0.66 -1.9
87,363 + MPMX20_00084 0.68 -1.2
87,371 - MPMX20_00084 0.68 +0.9
87,404 + MPMX20_00084 0.70 +0.5
87,411 + MPMX20_00084 0.70 -3.6
87,441 - MPMX20_00084 0.71 -0.7
87,441 - MPMX20_00084 0.71 -0.3
87,457 - MPMX20_00084 0.72 -2.7
87,463 + MPMX20_00084 0.72 -0.1
87,463 + MPMX20_00084 0.72 -2.7
87,464 + MPMX20_00084 0.72 -2.8
87,493 - MPMX20_00084 0.74 -0.3
87,511 + MPMX20_00084 0.75 -1.7
87,552 + MPMX20_00084 0.77 -0.5
87,609 + MPMX20_00084 0.79 -0.4
87,617 - MPMX20_00084 0.80 -0.9
87,627 - MPMX20_00084 0.80 -1.0
87,689 + MPMX20_00084 0.83 -0.3
87,694 + MPMX20_00084 0.83 -1.4
87,694 + MPMX20_00084 0.83 -1.2
87,694 + MPMX20_00084 0.83 -2.4
87,697 - MPMX20_00084 0.84 -0.1
87,697 - MPMX20_00084 0.84 -0.7
87,702 + MPMX20_00084 0.84 -1.5
87,702 - MPMX20_00084 0.84 -2.9
87,702 - MPMX20_00084 0.84 -2.1
87,792 - MPMX20_00084 0.88 -1.2
87,794 + MPMX20_00084 0.88 -1.3
87,816 + MPMX20_00084 0.89 -4.1
87,829 + MPMX20_00084 0.90 -1.7
87,829 + MPMX20_00084 0.90 -1.5
87,829 + MPMX20_00084 0.90 -1.4
87,837 - -2.4
87,837 - -2.3
88,062 - +0.4
88,152 - MPMX20_00085 0.16 +0.4
88,256 - MPMX20_00085 0.31 -0.8
88,284 + MPMX20_00085 0.35 +0.1
88,390 + MPMX20_00085 0.50 -0.7
88,448 - MPMX20_00085 0.59 -2.1
88,599 + MPMX20_00085 0.81 +0.2
88,601 + MPMX20_00085 0.81 +0.1
88,607 - MPMX20_00085 0.82 +1.0
88,607 - MPMX20_00085 0.82 -1.5
88,607 - MPMX20_00085 0.82 -2.0
88,607 - MPMX20_00085 0.82 -2.0
88,607 - MPMX20_00085 0.82 -3.5
88,609 - MPMX20_00085 0.82 -1.4
88,636 + MPMX20_00085 0.86 -0.4
88,656 + MPMX20_00085 0.89 -0.5
88,656 + MPMX20_00085 0.89 -0.3
88,687 - -1.7
88,922 + -0.6
88,987 + MPMX20_00086 0.12 -1.3
89,012 - MPMX20_00086 0.13 -2.9

Or see this region's nucleotide sequence