Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03200

Experiment: L-Leucine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03198 and MPMX20_03199 overlap by 4 nucleotidesMPMX20_03199 and MPMX20_03200 overlap by 4 nucleotidesMPMX20_03200 and MPMX20_03201 are separated by 88 nucleotides MPMX20_03198: MPMX20_03198 - 1,4-dihydroxy-2-naphthoyl-CoA synthase, at 3,367,335 to 3,368,192 _03198 MPMX20_03199: MPMX20_03199 - 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase, at 3,368,189 to 3,368,965 _03199 MPMX20_03200: MPMX20_03200 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase, at 3,368,962 to 3,370,632 _03200 MPMX20_03201: MPMX20_03201 - Isochorismate synthase MenF, at 3,370,721 to 3,372,016 _03201 Position (kb) 3368 3369 3370 3371Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3368.038 kb on - strand, within MPMX20_03198at 3368.132 kb on - strandat 3368.172 kb on + strandat 3368.172 kb on + strandat 3368.174 kb on - strandat 3368.182 kb on + strandat 3368.182 kb on + strandat 3368.190 kb on - strandat 3368.190 kb on - strandat 3368.277 kb on + strand, within MPMX20_03199at 3368.308 kb on + strand, within MPMX20_03199at 3368.322 kb on + strand, within MPMX20_03199at 3368.322 kb on + strand, within MPMX20_03199at 3368.456 kb on - strand, within MPMX20_03199at 3368.479 kb on - strand, within MPMX20_03199at 3368.586 kb on + strand, within MPMX20_03199at 3368.586 kb on + strand, within MPMX20_03199at 3368.594 kb on - strand, within MPMX20_03199at 3368.662 kb on - strand, within MPMX20_03199at 3368.794 kb on + strand, within MPMX20_03199at 3368.833 kb on + strand, within MPMX20_03199at 3368.835 kb on - strand, within MPMX20_03199at 3368.857 kb on + strand, within MPMX20_03199at 3368.929 kb on - strandat 3368.960 kb on + strandat 3369.073 kb on - strandat 3369.129 kb on - strand, within MPMX20_03200at 3369.179 kb on + strand, within MPMX20_03200at 3369.297 kb on + strand, within MPMX20_03200at 3369.323 kb on + strand, within MPMX20_03200at 3369.418 kb on - strand, within MPMX20_03200at 3369.419 kb on + strand, within MPMX20_03200at 3369.560 kb on + strand, within MPMX20_03200at 3369.560 kb on + strand, within MPMX20_03200at 3369.560 kb on + strand, within MPMX20_03200at 3369.560 kb on + strand, within MPMX20_03200at 3369.560 kb on + strand, within MPMX20_03200at 3369.596 kb on + strand, within MPMX20_03200at 3369.601 kb on + strand, within MPMX20_03200at 3369.603 kb on - strand, within MPMX20_03200at 3369.604 kb on - strand, within MPMX20_03200at 3369.604 kb on - strand, within MPMX20_03200at 3369.604 kb on - strand, within MPMX20_03200at 3369.627 kb on + strand, within MPMX20_03200at 3369.703 kb on - strand, within MPMX20_03200at 3369.710 kb on + strand, within MPMX20_03200at 3369.710 kb on + strand, within MPMX20_03200at 3369.723 kb on - strand, within MPMX20_03200at 3369.742 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.768 kb on + strand, within MPMX20_03200at 3369.771 kb on - strand, within MPMX20_03200at 3369.773 kb on + strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.776 kb on - strand, within MPMX20_03200at 3369.853 kb on - strand, within MPMX20_03200at 3369.853 kb on - strand, within MPMX20_03200at 3369.941 kb on + strand, within MPMX20_03200at 3369.944 kb on + strand, within MPMX20_03200at 3369.949 kb on - strand, within MPMX20_03200at 3369.949 kb on - strand, within MPMX20_03200at 3369.949 kb on - strand, within MPMX20_03200at 3370.070 kb on - strand, within MPMX20_03200at 3370.160 kb on + strand, within MPMX20_03200at 3370.207 kb on + strand, within MPMX20_03200at 3370.279 kb on - strand, within MPMX20_03200at 3370.284 kb on - strand, within MPMX20_03200at 3370.310 kb on - strand, within MPMX20_03200at 3370.378 kb on - strand, within MPMX20_03200at 3370.561 kb on + strandat 3370.584 kb on - strandat 3370.628 kb on + strandat 3370.629 kb on + strandat 3370.637 kb on - strandat 3370.663 kb on + strandat 3370.698 kb on + strandat 3370.718 kb on + strandat 3370.725 kb on + strandat 3370.742 kb on + strandat 3370.778 kb on + strandat 3370.778 kb on + strandat 3370.786 kb on - strandat 3370.789 kb on + strandat 3370.932 kb on + strand, within MPMX20_03201at 3371.104 kb on + strand, within MPMX20_03201at 3371.111 kb on - strand, within MPMX20_03201at 3371.116 kb on + strand, within MPMX20_03201at 3371.118 kb on - strand, within MPMX20_03201at 3371.124 kb on - strand, within MPMX20_03201at 3371.156 kb on - strand, within MPMX20_03201at 3371.365 kb on - strand, within MPMX20_03201at 3371.398 kb on + strand, within MPMX20_03201at 3371.398 kb on + strand, within MPMX20_03201at 3371.404 kb on - strand, within MPMX20_03201at 3371.406 kb on - strand, within MPMX20_03201at 3371.422 kb on + strand, within MPMX20_03201at 3371.443 kb on - strand, within MPMX20_03201at 3371.471 kb on + strand, within MPMX20_03201at 3371.471 kb on + strand, within MPMX20_03201at 3371.471 kb on + strand, within MPMX20_03201at 3371.472 kb on - strand, within MPMX20_03201

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Leucine (N)
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3,368,038 - MPMX20_03198 0.82 -0.0
3,368,132 - -1.3
3,368,172 + +1.3
3,368,172 + +0.1
3,368,174 - -0.4
3,368,182 + -0.8
3,368,182 + -1.1
3,368,190 - +0.9
3,368,190 - +0.7
3,368,277 + MPMX20_03199 0.11 -0.7
3,368,308 + MPMX20_03199 0.15 -3.3
3,368,322 + MPMX20_03199 0.17 +0.1
3,368,322 + MPMX20_03199 0.17 -0.1
3,368,456 - MPMX20_03199 0.34 +0.8
3,368,479 - MPMX20_03199 0.37 -1.0
3,368,586 + MPMX20_03199 0.51 -0.2
3,368,586 + MPMX20_03199 0.51 +1.0
3,368,594 - MPMX20_03199 0.52 +0.7
3,368,662 - MPMX20_03199 0.61 +0.1
3,368,794 + MPMX20_03199 0.78 -0.4
3,368,833 + MPMX20_03199 0.83 +1.4
3,368,835 - MPMX20_03199 0.83 -2.0
3,368,857 + MPMX20_03199 0.86 -0.4
3,368,929 - -1.0
3,368,960 + -1.5
3,369,073 - +1.0
3,369,129 - MPMX20_03200 0.10 +0.0
3,369,179 + MPMX20_03200 0.13 +0.3
3,369,297 + MPMX20_03200 0.20 +0.3
3,369,323 + MPMX20_03200 0.22 +1.1
3,369,418 - MPMX20_03200 0.27 +0.1
3,369,419 + MPMX20_03200 0.27 +0.5
3,369,560 + MPMX20_03200 0.36 +0.6
3,369,560 + MPMX20_03200 0.36 -0.3
3,369,560 + MPMX20_03200 0.36 -0.0
3,369,560 + MPMX20_03200 0.36 +1.8
3,369,560 + MPMX20_03200 0.36 -0.9
3,369,596 + MPMX20_03200 0.38 +0.2
3,369,601 + MPMX20_03200 0.38 +1.7
3,369,603 - MPMX20_03200 0.38 +0.7
3,369,604 - MPMX20_03200 0.38 +0.0
3,369,604 - MPMX20_03200 0.38 +0.3
3,369,604 - MPMX20_03200 0.38 +0.7
3,369,627 + MPMX20_03200 0.40 +0.1
3,369,703 - MPMX20_03200 0.44 +0.3
3,369,710 + MPMX20_03200 0.45 +0.1
3,369,710 + MPMX20_03200 0.45 +1.2
3,369,723 - MPMX20_03200 0.46 +0.6
3,369,742 + MPMX20_03200 0.47 -0.2
3,369,768 + MPMX20_03200 0.48 -0.1
3,369,768 + MPMX20_03200 0.48 +0.2
3,369,768 + MPMX20_03200 0.48 +0.3
3,369,768 + MPMX20_03200 0.48 +0.2
3,369,768 + MPMX20_03200 0.48 +1.4
3,369,768 + MPMX20_03200 0.48 +0.6
3,369,768 + MPMX20_03200 0.48 +0.6
3,369,768 + MPMX20_03200 0.48 +0.5
3,369,771 - MPMX20_03200 0.48 +0.0
3,369,773 + MPMX20_03200 0.49 +1.4
3,369,776 - MPMX20_03200 0.49 -0.1
3,369,776 - MPMX20_03200 0.49 -0.1
3,369,776 - MPMX20_03200 0.49 +0.2
3,369,776 - MPMX20_03200 0.49 +0.1
3,369,776 - MPMX20_03200 0.49 -3.3
3,369,776 - MPMX20_03200 0.49 -1.1
3,369,776 - MPMX20_03200 0.49 +0.4
3,369,776 - MPMX20_03200 0.49 -0.3
3,369,776 - MPMX20_03200 0.49 +0.4
3,369,853 - MPMX20_03200 0.53 +0.3
3,369,853 - MPMX20_03200 0.53 +4.7
3,369,941 + MPMX20_03200 0.59 -1.3
3,369,944 + MPMX20_03200 0.59 +0.5
3,369,949 - MPMX20_03200 0.59 -0.7
3,369,949 - MPMX20_03200 0.59 +0.4
3,369,949 - MPMX20_03200 0.59 -0.2
3,370,070 - MPMX20_03200 0.66 -0.8
3,370,160 + MPMX20_03200 0.72 +0.2
3,370,207 + MPMX20_03200 0.75 +0.1
3,370,279 - MPMX20_03200 0.79 +0.2
3,370,284 - MPMX20_03200 0.79 +1.3
3,370,310 - MPMX20_03200 0.81 +0.4
3,370,378 - MPMX20_03200 0.85 -0.4
3,370,561 + -0.1
3,370,584 - +0.7
3,370,628 + -2.0
3,370,629 + +1.2
3,370,637 - +0.9
3,370,663 + -2.0
3,370,698 + +2.5
3,370,718 + +1.1
3,370,725 + -0.1
3,370,742 + +0.8
3,370,778 + +1.5
3,370,778 + -0.6
3,370,786 - -0.2
3,370,789 + +0.3
3,370,932 + MPMX20_03201 0.16 +0.3
3,371,104 + MPMX20_03201 0.30 +0.1
3,371,111 - MPMX20_03201 0.30 +1.2
3,371,116 + MPMX20_03201 0.30 +0.3
3,371,118 - MPMX20_03201 0.31 +0.6
3,371,124 - MPMX20_03201 0.31 -0.0
3,371,156 - MPMX20_03201 0.34 +0.7
3,371,365 - MPMX20_03201 0.50 +1.3
3,371,398 + MPMX20_03201 0.52 +0.5
3,371,398 + MPMX20_03201 0.52 +0.7
3,371,404 - MPMX20_03201 0.53 -0.8
3,371,406 - MPMX20_03201 0.53 -0.5
3,371,422 + MPMX20_03201 0.54 +0.1
3,371,443 - MPMX20_03201 0.56 +0.2
3,371,471 + MPMX20_03201 0.58 +0.4
3,371,471 + MPMX20_03201 0.58 +1.3
3,371,471 + MPMX20_03201 0.58 -0.8
3,371,472 - MPMX20_03201 0.58 -1.7

Or see this region's nucleotide sequence