Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02001 and MPMX20_02002 are separated by 65 nucleotides MPMX20_02002 and MPMX20_02003 are separated by 59 nucleotides MPMX20_02003 and MPMX20_02004 are separated by 105 nucleotides
MPMX20_02001: MPMX20_02001 - Tyrosine--tRNA ligase, at 2,089,995 to 2,091,269
_02001
MPMX20_02002: MPMX20_02002 - Pyridoxal kinase PdxY, at 2,091,335 to 2,092,195
_02002
MPMX20_02003: MPMX20_02003 - Glutathione S-transferase GstA, at 2,092,255 to 2,092,860
_02003
MPMX20_02004: MPMX20_02004 - Dipeptide and tripeptide permease A, at 2,092,966 to 2,094,474
_02004
Position (kb)
2092
2093 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2091.358 kb on + strand at 2091.368 kb on + strand at 2091.376 kb on - strand at 2091.388 kb on - strand at 2091.415 kb on + strand at 2091.427 kb on + strand, within MPMX20_02002 at 2091.436 kb on + strand, within MPMX20_02002 at 2091.436 kb on + strand, within MPMX20_02002 at 2091.444 kb on - strand, within MPMX20_02002 at 2091.444 kb on - strand, within MPMX20_02002 at 2091.467 kb on + strand, within MPMX20_02002 at 2091.516 kb on + strand, within MPMX20_02002 at 2091.521 kb on + strand, within MPMX20_02002 at 2091.521 kb on + strand, within MPMX20_02002 at 2091.528 kb on + strand, within MPMX20_02002 at 2091.569 kb on - strand, within MPMX20_02002 at 2091.574 kb on - strand, within MPMX20_02002 at 2091.583 kb on + strand, within MPMX20_02002 at 2091.616 kb on - strand, within MPMX20_02002 at 2091.671 kb on + strand, within MPMX20_02002 at 2091.720 kb on + strand, within MPMX20_02002 at 2091.724 kb on - strand, within MPMX20_02002 at 2091.808 kb on - strand, within MPMX20_02002 at 2091.810 kb on + strand, within MPMX20_02002 at 2091.818 kb on - strand, within MPMX20_02002 at 2091.818 kb on - strand, within MPMX20_02002 at 2091.818 kb on - strand, within MPMX20_02002 at 2091.848 kb on + strand, within MPMX20_02002 at 2091.888 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.893 kb on + strand, within MPMX20_02002 at 2091.895 kb on + strand, within MPMX20_02002 at 2091.901 kb on - strand, within MPMX20_02002 at 2091.901 kb on - strand, within MPMX20_02002 at 2091.901 kb on - strand, within MPMX20_02002 at 2091.930 kb on - strand, within MPMX20_02002 at 2092.236 kb on + strand at 2092.244 kb on - strand at 2092.246 kb on - strand at 2092.258 kb on + strand at 2092.258 kb on + strand at 2092.258 kb on + strand at 2092.266 kb on - strand at 2092.266 kb on - strand at 2092.271 kb on + strand at 2092.418 kb on + strand, within MPMX20_02003 at 2092.511 kb on + strand, within MPMX20_02003 at 2092.511 kb on - strand, within MPMX20_02003 at 2092.517 kb on + strand, within MPMX20_02003 at 2092.664 kb on + strand, within MPMX20_02003 at 2092.685 kb on - strand, within MPMX20_02003 at 2092.767 kb on + strand, within MPMX20_02003 at 2092.772 kb on + strand, within MPMX20_02003 at 2092.772 kb on + strand, within MPMX20_02003 at 2092.775 kb on - strand, within MPMX20_02003 at 2092.775 kb on - strand, within MPMX20_02003 at 2092.775 kb on - strand, within MPMX20_02003 at 2092.799 kb on + strand, within MPMX20_02003 at 2092.809 kb on + strand at 2092.809 kb on + strand at 2092.809 kb on + strand at 2092.809 kb on + strand at 2092.817 kb on - strand at 2092.829 kb on - strand at 2092.889 kb on - strand at 2092.891 kb on + strand at 2092.899 kb on - strand at 2093.008 kb on + strand at 2093.028 kb on + strand at 2093.047 kb on + strand at 2093.083 kb on - strand at 2093.147 kb on + strand, within MPMX20_02004 at 2093.155 kb on - strand, within MPMX20_02004 at 2093.209 kb on + strand, within MPMX20_02004 at 2093.268 kb on + strand, within MPMX20_02004 at 2093.270 kb on - strand, within MPMX20_02004 at 2093.271 kb on - strand, within MPMX20_02004 at 2093.276 kb on - strand, within MPMX20_02004 at 2093.344 kb on - strand, within MPMX20_02004 at 2093.393 kb on - strand, within MPMX20_02004 at 2093.504 kb on + strand, within MPMX20_02004 at 2093.533 kb on + strand, within MPMX20_02004 at 2093.533 kb on + strand, within MPMX20_02004 at 2093.560 kb on - strand, within MPMX20_02004 at 2093.596 kb on + strand, within MPMX20_02004 at 2093.604 kb on - strand, within MPMX20_02004 at 2093.618 kb on - strand, within MPMX20_02004 at 2093.629 kb on - strand, within MPMX20_02004 at 2093.666 kb on - strand, within MPMX20_02004 at 2093.717 kb on + strand, within MPMX20_02004 at 2093.722 kb on + strand, within MPMX20_02004 at 2093.730 kb on - strand, within MPMX20_02004 at 2093.730 kb on - strand, within MPMX20_02004 at 2093.751 kb on - strand, within MPMX20_02004 at 2093.752 kb on - strand, within MPMX20_02004
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 2,091,358 + -2.8 2,091,368 + +0.4 2,091,376 - -0.9 2,091,388 - -1.1 2,091,415 + -1.3 2,091,427 + MPMX20_02002 0.11 -3.3 2,091,436 + MPMX20_02002 0.12 -1.9 2,091,436 + MPMX20_02002 0.12 -0.3 2,091,444 - MPMX20_02002 0.13 -0.5 2,091,444 - MPMX20_02002 0.13 -1.2 2,091,467 + MPMX20_02002 0.15 -1.1 2,091,516 + MPMX20_02002 0.21 -0.8 2,091,521 + MPMX20_02002 0.22 +0.1 2,091,521 + MPMX20_02002 0.22 -1.2 2,091,528 + MPMX20_02002 0.22 +1.1 2,091,569 - MPMX20_02002 0.27 -0.5 2,091,574 - MPMX20_02002 0.28 -0.6 2,091,583 + MPMX20_02002 0.29 -1.4 2,091,616 - MPMX20_02002 0.33 -0.6 2,091,671 + MPMX20_02002 0.39 -1.1 2,091,720 + MPMX20_02002 0.45 -0.5 2,091,724 - MPMX20_02002 0.45 -0.3 2,091,808 - MPMX20_02002 0.55 -2.6 2,091,810 + MPMX20_02002 0.55 +0.7 2,091,818 - MPMX20_02002 0.56 -1.7 2,091,818 - MPMX20_02002 0.56 +0.3 2,091,818 - MPMX20_02002 0.56 +0.8 2,091,848 + MPMX20_02002 0.60 +2.4 2,091,888 + MPMX20_02002 0.64 -1.5 2,091,893 + MPMX20_02002 0.65 +0.1 2,091,893 + MPMX20_02002 0.65 -2.1 2,091,893 + MPMX20_02002 0.65 +1.1 2,091,893 + MPMX20_02002 0.65 +0.2 2,091,893 + MPMX20_02002 0.65 -0.9 2,091,893 + MPMX20_02002 0.65 +0.7 2,091,895 + MPMX20_02002 0.65 +1.4 2,091,901 - MPMX20_02002 0.66 +0.2 2,091,901 - MPMX20_02002 0.66 +1.6 2,091,901 - MPMX20_02002 0.66 -1.1 2,091,930 - MPMX20_02002 0.69 +1.0 2,092,236 + +0.5 2,092,244 - +0.2 2,092,246 - -2.9 2,092,258 + -0.8 2,092,258 + +0.4 2,092,258 + -0.4 2,092,266 - +0.5 2,092,266 - -0.2 2,092,271 + -0.3 2,092,418 + MPMX20_02003 0.27 +1.1 2,092,511 + MPMX20_02003 0.42 +1.0 2,092,511 - MPMX20_02003 0.42 -0.1 2,092,517 + MPMX20_02003 0.43 +1.0 2,092,664 + MPMX20_02003 0.67 +0.1 2,092,685 - MPMX20_02003 0.71 +0.3 2,092,767 + MPMX20_02003 0.84 +0.8 2,092,772 + MPMX20_02003 0.85 +2.1 2,092,772 + MPMX20_02003 0.85 -2.2 2,092,775 - MPMX20_02003 0.86 -0.1 2,092,775 - MPMX20_02003 0.86 +0.1 2,092,775 - MPMX20_02003 0.86 +0.3 2,092,799 + MPMX20_02003 0.90 +0.9 2,092,809 + -0.3 2,092,809 + -1.8 2,092,809 + -0.2 2,092,809 + +0.7 2,092,817 - +0.1 2,092,829 - +0.3 2,092,889 - +1.9 2,092,891 + -1.5 2,092,899 - +1.4 2,093,008 + +0.1 2,093,028 + -0.1 2,093,047 + -1.4 2,093,083 - +0.1 2,093,147 + MPMX20_02004 0.12 +0.6 2,093,155 - MPMX20_02004 0.13 +0.0 2,093,209 + MPMX20_02004 0.16 -2.1 2,093,268 + MPMX20_02004 0.20 -0.8 2,093,270 - MPMX20_02004 0.20 +0.0 2,093,271 - MPMX20_02004 0.20 +0.5 2,093,276 - MPMX20_02004 0.21 +0.1 2,093,344 - MPMX20_02004 0.25 +0.3 2,093,393 - MPMX20_02004 0.28 +0.6 2,093,504 + MPMX20_02004 0.36 -0.6 2,093,533 + MPMX20_02004 0.38 +1.5 2,093,533 + MPMX20_02004 0.38 -0.3 2,093,560 - MPMX20_02004 0.39 +3.4 2,093,596 + MPMX20_02004 0.42 +0.9 2,093,604 - MPMX20_02004 0.42 +0.3 2,093,618 - MPMX20_02004 0.43 +0.5 2,093,629 - MPMX20_02004 0.44 -0.7 2,093,666 - MPMX20_02004 0.46 +0.4 2,093,717 + MPMX20_02004 0.50 +0.1 2,093,722 + MPMX20_02004 0.50 +0.9 2,093,730 - MPMX20_02004 0.51 +1.1 2,093,730 - MPMX20_02004 0.51 +1.7 2,093,751 - MPMX20_02004 0.52 -0.2 2,093,752 - MPMX20_02004 0.52 +0.1
Or see this region's nucleotide sequence