Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03381 and MPMX20_03382 are separated by 67 nucleotides MPMX20_03382 and MPMX20_03383 are separated by 162 nucleotides
MPMX20_03381: MPMX20_03381 - GMP synthase [glutamine-hydrolyzing], at 3,559,575 to 3,561,152
_03381
MPMX20_03382: MPMX20_03382 - Inosine-5'-monophosphate dehydrogenase, at 3,561,220 to 3,562,686
_03382
MPMX20_03383: MPMX20_03383 - Exodeoxyribonuclease 7 large subunit, at 3,562,849 to 3,564,222
_03383
Position (kb)
3561
3562
3563 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3561.505 kb on - strand, within MPMX20_03382 at 3561.597 kb on + strand, within MPMX20_03382 at 3561.708 kb on - strand, within MPMX20_03382 at 3561.741 kb on - strand, within MPMX20_03382 at 3561.818 kb on + strand, within MPMX20_03382 at 3561.826 kb on - strand, within MPMX20_03382 at 3561.876 kb on + strand, within MPMX20_03382 at 3561.920 kb on + strand, within MPMX20_03382 at 3562.037 kb on + strand, within MPMX20_03382 at 3562.256 kb on - strand, within MPMX20_03382 at 3562.280 kb on - strand, within MPMX20_03382 at 3562.379 kb on - strand, within MPMX20_03382 at 3562.703 kb on - strand at 3562.703 kb on - strand at 3562.729 kb on + strand at 3562.729 kb on + strand at 3562.729 kb on + strand at 3562.737 kb on - strand at 3562.789 kb on + strand at 3562.807 kb on - strand at 3562.848 kb on + strand at 3562.856 kb on - strand at 3562.935 kb on + strand at 3562.935 kb on + strand at 3562.936 kb on + strand at 3562.943 kb on - strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.971 kb on + strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3562.979 kb on - strand at 3563.004 kb on + strand, within MPMX20_03383 at 3563.017 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.027 kb on + strand, within MPMX20_03383 at 3563.035 kb on - strand, within MPMX20_03383 at 3563.086 kb on + strand, within MPMX20_03383 at 3563.102 kb on + strand, within MPMX20_03383 at 3563.111 kb on + strand, within MPMX20_03383 at 3563.221 kb on + strand, within MPMX20_03383 at 3563.253 kb on + strand, within MPMX20_03383 at 3563.253 kb on + strand, within MPMX20_03383 at 3563.255 kb on - strand, within MPMX20_03383 at 3563.278 kb on - strand, within MPMX20_03383 at 3563.323 kb on - strand, within MPMX20_03383 at 3563.369 kb on + strand, within MPMX20_03383 at 3563.374 kb on + strand, within MPMX20_03383 at 3563.374 kb on + strand, within MPMX20_03383 at 3563.431 kb on + strand, within MPMX20_03383 at 3563.439 kb on - strand, within MPMX20_03383 at 3563.439 kb on - strand, within MPMX20_03383 at 3563.439 kb on - strand, within MPMX20_03383 at 3563.446 kb on - strand, within MPMX20_03383 at 3563.506 kb on + strand, within MPMX20_03383 at 3563.514 kb on - strand, within MPMX20_03383 at 3563.530 kb on + strand, within MPMX20_03383 at 3563.609 kb on - strand, within MPMX20_03383 at 3563.656 kb on - strand, within MPMX20_03383 at 3563.685 kb on - strand, within MPMX20_03383
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 3,561,505 - MPMX20_03382 0.19 -1.2 3,561,597 + MPMX20_03382 0.26 -0.8 3,561,708 - MPMX20_03382 0.33 -1.4 3,561,741 - MPMX20_03382 0.36 -1.2 3,561,818 + MPMX20_03382 0.41 -0.8 3,561,826 - MPMX20_03382 0.41 +0.2 3,561,876 + MPMX20_03382 0.45 -0.2 3,561,920 + MPMX20_03382 0.48 -2.4 3,562,037 + MPMX20_03382 0.56 -1.0 3,562,256 - MPMX20_03382 0.71 -1.8 3,562,280 - MPMX20_03382 0.72 -0.8 3,562,379 - MPMX20_03382 0.79 -0.2 3,562,703 - +0.2 3,562,703 - -0.6 3,562,729 + -0.9 3,562,729 + -0.3 3,562,729 + +0.9 3,562,737 - -0.3 3,562,789 + +0.0 3,562,807 - +0.6 3,562,848 + -0.5 3,562,856 - -1.4 3,562,935 + -0.2 3,562,935 + +0.4 3,562,936 + -0.5 3,562,943 - -0.6 3,562,971 + -1.0 3,562,971 + +0.0 3,562,971 + +0.3 3,562,971 + +0.1 3,562,971 + +0.6 3,562,971 + -0.9 3,562,971 + -0.5 3,562,971 + -1.0 3,562,971 + -0.6 3,562,971 + -0.5 3,562,971 + -1.2 3,562,979 - -0.8 3,562,979 - +1.8 3,562,979 - -1.5 3,562,979 - +0.2 3,562,979 - -0.4 3,562,979 - -0.8 3,562,979 - -1.0 3,562,979 - -2.9 3,562,979 - -2.4 3,562,979 - +0.0 3,563,004 + MPMX20_03383 0.11 -0.7 3,563,017 + MPMX20_03383 0.12 -1.9 3,563,027 + MPMX20_03383 0.13 +0.2 3,563,027 + MPMX20_03383 0.13 -1.2 3,563,027 + MPMX20_03383 0.13 -1.6 3,563,027 + MPMX20_03383 0.13 -0.4 3,563,027 + MPMX20_03383 0.13 -0.9 3,563,027 + MPMX20_03383 0.13 +0.9 3,563,035 - MPMX20_03383 0.14 -0.7 3,563,086 + MPMX20_03383 0.17 +1.2 3,563,102 + MPMX20_03383 0.18 -2.6 3,563,111 + MPMX20_03383 0.19 -0.6 3,563,221 + MPMX20_03383 0.27 +1.2 3,563,253 + MPMX20_03383 0.29 +0.1 3,563,253 + MPMX20_03383 0.29 -0.2 3,563,255 - MPMX20_03383 0.30 -0.3 3,563,278 - MPMX20_03383 0.31 +1.0 3,563,323 - MPMX20_03383 0.34 -1.8 3,563,369 + MPMX20_03383 0.38 -1.1 3,563,374 + MPMX20_03383 0.38 +0.7 3,563,374 + MPMX20_03383 0.38 -2.1 3,563,431 + MPMX20_03383 0.42 -0.0 3,563,439 - MPMX20_03383 0.43 -0.1 3,563,439 - MPMX20_03383 0.43 +0.1 3,563,439 - MPMX20_03383 0.43 +0.2 3,563,446 - MPMX20_03383 0.43 +0.7 3,563,506 + MPMX20_03383 0.48 -1.8 3,563,514 - MPMX20_03383 0.48 +0.4 3,563,530 + MPMX20_03383 0.50 -0.2 3,563,609 - MPMX20_03383 0.55 -1.2 3,563,656 - MPMX20_03383 0.59 +0.1 3,563,685 - MPMX20_03383 0.61 -0.9
Or see this region's nucleotide sequence