Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03382

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03381 and MPMX20_03382 are separated by 67 nucleotidesMPMX20_03382 and MPMX20_03383 are separated by 162 nucleotides MPMX20_03381: MPMX20_03381 - GMP synthase [glutamine-hydrolyzing], at 3,559,575 to 3,561,152 _03381 MPMX20_03382: MPMX20_03382 - Inosine-5'-monophosphate dehydrogenase, at 3,561,220 to 3,562,686 _03382 MPMX20_03383: MPMX20_03383 - Exodeoxyribonuclease 7 large subunit, at 3,562,849 to 3,564,222 _03383 Position (kb) 3561 3562 3563Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3561.505 kb on - strand, within MPMX20_03382at 3561.597 kb on + strand, within MPMX20_03382at 3561.708 kb on - strand, within MPMX20_03382at 3561.741 kb on - strand, within MPMX20_03382at 3561.818 kb on + strand, within MPMX20_03382at 3561.826 kb on - strand, within MPMX20_03382at 3561.876 kb on + strand, within MPMX20_03382at 3561.920 kb on + strand, within MPMX20_03382at 3562.037 kb on + strand, within MPMX20_03382at 3562.256 kb on - strand, within MPMX20_03382at 3562.280 kb on - strand, within MPMX20_03382at 3562.379 kb on - strand, within MPMX20_03382at 3562.703 kb on - strandat 3562.703 kb on - strandat 3562.729 kb on + strandat 3562.729 kb on + strandat 3562.729 kb on + strandat 3562.737 kb on - strandat 3562.789 kb on + strandat 3562.807 kb on - strandat 3562.848 kb on + strandat 3562.856 kb on - strandat 3562.935 kb on + strandat 3562.935 kb on + strandat 3562.936 kb on + strandat 3562.943 kb on - strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.971 kb on + strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3562.979 kb on - strandat 3563.004 kb on + strand, within MPMX20_03383at 3563.017 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.027 kb on + strand, within MPMX20_03383at 3563.035 kb on - strand, within MPMX20_03383at 3563.086 kb on + strand, within MPMX20_03383at 3563.102 kb on + strand, within MPMX20_03383at 3563.111 kb on + strand, within MPMX20_03383at 3563.221 kb on + strand, within MPMX20_03383at 3563.253 kb on + strand, within MPMX20_03383at 3563.253 kb on + strand, within MPMX20_03383at 3563.255 kb on - strand, within MPMX20_03383at 3563.278 kb on - strand, within MPMX20_03383at 3563.323 kb on - strand, within MPMX20_03383at 3563.369 kb on + strand, within MPMX20_03383at 3563.374 kb on + strand, within MPMX20_03383at 3563.374 kb on + strand, within MPMX20_03383at 3563.431 kb on + strand, within MPMX20_03383at 3563.439 kb on - strand, within MPMX20_03383at 3563.439 kb on - strand, within MPMX20_03383at 3563.439 kb on - strand, within MPMX20_03383at 3563.446 kb on - strand, within MPMX20_03383at 3563.506 kb on + strand, within MPMX20_03383at 3563.514 kb on - strand, within MPMX20_03383at 3563.530 kb on + strand, within MPMX20_03383at 3563.609 kb on - strand, within MPMX20_03383at 3563.656 kb on - strand, within MPMX20_03383at 3563.685 kb on - strand, within MPMX20_03383

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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3,561,505 - MPMX20_03382 0.19 -1.2
3,561,597 + MPMX20_03382 0.26 -0.8
3,561,708 - MPMX20_03382 0.33 -1.4
3,561,741 - MPMX20_03382 0.36 -1.2
3,561,818 + MPMX20_03382 0.41 -0.8
3,561,826 - MPMX20_03382 0.41 +0.2
3,561,876 + MPMX20_03382 0.45 -0.2
3,561,920 + MPMX20_03382 0.48 -2.4
3,562,037 + MPMX20_03382 0.56 -1.0
3,562,256 - MPMX20_03382 0.71 -1.8
3,562,280 - MPMX20_03382 0.72 -0.8
3,562,379 - MPMX20_03382 0.79 -0.2
3,562,703 - +0.2
3,562,703 - -0.6
3,562,729 + -0.9
3,562,729 + -0.3
3,562,729 + +0.9
3,562,737 - -0.3
3,562,789 + +0.0
3,562,807 - +0.6
3,562,848 + -0.5
3,562,856 - -1.4
3,562,935 + -0.2
3,562,935 + +0.4
3,562,936 + -0.5
3,562,943 - -0.6
3,562,971 + -1.0
3,562,971 + +0.0
3,562,971 + +0.3
3,562,971 + +0.1
3,562,971 + +0.6
3,562,971 + -0.9
3,562,971 + -0.5
3,562,971 + -1.0
3,562,971 + -0.6
3,562,971 + -0.5
3,562,971 + -1.2
3,562,979 - -0.8
3,562,979 - +1.8
3,562,979 - -1.5
3,562,979 - +0.2
3,562,979 - -0.4
3,562,979 - -0.8
3,562,979 - -1.0
3,562,979 - -2.9
3,562,979 - -2.4
3,562,979 - +0.0
3,563,004 + MPMX20_03383 0.11 -0.7
3,563,017 + MPMX20_03383 0.12 -1.9
3,563,027 + MPMX20_03383 0.13 +0.2
3,563,027 + MPMX20_03383 0.13 -1.2
3,563,027 + MPMX20_03383 0.13 -1.6
3,563,027 + MPMX20_03383 0.13 -0.4
3,563,027 + MPMX20_03383 0.13 -0.9
3,563,027 + MPMX20_03383 0.13 +0.9
3,563,035 - MPMX20_03383 0.14 -0.7
3,563,086 + MPMX20_03383 0.17 +1.2
3,563,102 + MPMX20_03383 0.18 -2.6
3,563,111 + MPMX20_03383 0.19 -0.6
3,563,221 + MPMX20_03383 0.27 +1.2
3,563,253 + MPMX20_03383 0.29 +0.1
3,563,253 + MPMX20_03383 0.29 -0.2
3,563,255 - MPMX20_03383 0.30 -0.3
3,563,278 - MPMX20_03383 0.31 +1.0
3,563,323 - MPMX20_03383 0.34 -1.8
3,563,369 + MPMX20_03383 0.38 -1.1
3,563,374 + MPMX20_03383 0.38 +0.7
3,563,374 + MPMX20_03383 0.38 -2.1
3,563,431 + MPMX20_03383 0.42 -0.0
3,563,439 - MPMX20_03383 0.43 -0.1
3,563,439 - MPMX20_03383 0.43 +0.1
3,563,439 - MPMX20_03383 0.43 +0.2
3,563,446 - MPMX20_03383 0.43 +0.7
3,563,506 + MPMX20_03383 0.48 -1.8
3,563,514 - MPMX20_03383 0.48 +0.4
3,563,530 + MPMX20_03383 0.50 -0.2
3,563,609 - MPMX20_03383 0.55 -1.2
3,563,656 - MPMX20_03383 0.59 +0.1
3,563,685 - MPMX20_03383 0.61 -0.9

Or see this region's nucleotide sequence