Experiment: L-Alanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02698 and MPMX20_02699 are separated by 9 nucleotides MPMX20_02699 and MPMX20_02700 are separated by 321 nucleotides
MPMX20_02698: MPMX20_02698 - Alanine racemase, catabolic, at 2,851,922 to 2,852,992
_02698
MPMX20_02699: MPMX20_02699 - D-amino acid dehydrogenase, at 2,853,002 to 2,854,300
_02699
MPMX20_02700: MPMX20_02700 - hypothetical protein, at 2,854,622 to 2,856,154
_02700
Position (kb)
2853
2854
2855 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2852.046 kb on + strand, within MPMX20_02698 at 2852.232 kb on + strand, within MPMX20_02698 at 2852.247 kb on + strand, within MPMX20_02698 at 2852.335 kb on + strand, within MPMX20_02698 at 2852.343 kb on - strand, within MPMX20_02698 at 2852.449 kb on - strand, within MPMX20_02698 at 2852.566 kb on + strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.568 kb on - strand, within MPMX20_02698 at 2852.597 kb on - strand, within MPMX20_02698 at 2852.671 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.678 kb on - strand, within MPMX20_02698 at 2852.711 kb on + strand, within MPMX20_02698 at 2852.752 kb on - strand, within MPMX20_02698 at 2852.872 kb on + strand, within MPMX20_02698 at 2852.934 kb on + strand at 2852.934 kb on + strand at 2852.942 kb on - strand at 2852.985 kb on - strand at 2852.995 kb on - strand at 2852.995 kb on - strand at 2852.998 kb on + strand at 2853.125 kb on - strand at 2853.127 kb on + strand at 2853.127 kb on + strand at 2853.135 kb on - strand, within MPMX20_02699 at 2853.220 kb on + strand, within MPMX20_02699 at 2853.300 kb on + strand, within MPMX20_02699 at 2853.302 kb on - strand, within MPMX20_02699 at 2853.467 kb on + strand, within MPMX20_02699 at 2853.547 kb on - strand, within MPMX20_02699 at 2853.594 kb on - strand, within MPMX20_02699 at 2853.731 kb on - strand, within MPMX20_02699 at 2853.756 kb on + strand, within MPMX20_02699 at 2853.771 kb on + strand, within MPMX20_02699 at 2853.777 kb on + strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.779 kb on - strand, within MPMX20_02699 at 2853.803 kb on - strand, within MPMX20_02699 at 2853.803 kb on - strand, within MPMX20_02699 at 2853.881 kb on - strand, within MPMX20_02699 at 2853.956 kb on + strand, within MPMX20_02699 at 2853.976 kb on + strand, within MPMX20_02699 at 2854.017 kb on - strand, within MPMX20_02699 at 2854.044 kb on + strand, within MPMX20_02699 at 2854.044 kb on + strand, within MPMX20_02699 at 2854.044 kb on + strand, within MPMX20_02699 at 2854.052 kb on - strand, within MPMX20_02699 at 2854.052 kb on - strand, within MPMX20_02699 at 2854.124 kb on + strand, within MPMX20_02699 at 2854.201 kb on - strand at 2854.205 kb on - strand at 2854.227 kb on - strand at 2854.278 kb on - strand at 2854.278 kb on - strand at 2854.296 kb on + strand at 2854.298 kb on + strand at 2854.344 kb on + strand at 2854.468 kb on + strand at 2854.578 kb on - strand at 2854.606 kb on + strand at 2854.610 kb on - strand at 2854.610 kb on - strand at 2854.634 kb on - strand at 2854.656 kb on - strand at 2854.661 kb on - strand at 2854.661 kb on - strand at 2854.752 kb on + strand at 2854.760 kb on - strand at 2854.776 kb on + strand, within MPMX20_02700 at 2854.776 kb on + strand, within MPMX20_02700 at 2854.776 kb on - strand, within MPMX20_02700 at 2854.777 kb on - strand, within MPMX20_02700 at 2854.784 kb on - strand, within MPMX20_02700 at 2854.884 kb on + strand, within MPMX20_02700 at 2854.917 kb on + strand, within MPMX20_02700 at 2854.917 kb on + strand, within MPMX20_02700 at 2854.924 kb on + strand, within MPMX20_02700 at 2854.925 kb on - strand, within MPMX20_02700 at 2854.925 kb on - strand, within MPMX20_02700 at 2854.925 kb on - strand, within MPMX20_02700 at 2854.935 kb on - strand, within MPMX20_02700 at 2854.940 kb on - strand, within MPMX20_02700 at 2854.964 kb on - strand, within MPMX20_02700 at 2854.964 kb on - strand, within MPMX20_02700 at 2854.982 kb on + strand, within MPMX20_02700 at 2854.995 kb on - strand, within MPMX20_02700 at 2855.012 kb on - strand, within MPMX20_02700 at 2855.017 kb on + strand, within MPMX20_02700 at 2855.037 kb on + strand, within MPMX20_02700 at 2855.037 kb on + strand, within MPMX20_02700 at 2855.169 kb on - strand, within MPMX20_02700 at 2855.176 kb on - strand, within MPMX20_02700 at 2855.240 kb on - strand, within MPMX20_02700 at 2855.246 kb on + strand, within MPMX20_02700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Alanine (N) remove 2,852,046 + MPMX20_02698 0.12 -2.3 2,852,232 + MPMX20_02698 0.29 -4.9 2,852,247 + MPMX20_02698 0.30 +0.2 2,852,335 + MPMX20_02698 0.39 -3.1 2,852,343 - MPMX20_02698 0.39 +0.2 2,852,449 - MPMX20_02698 0.49 -3.8 2,852,566 + MPMX20_02698 0.60 -1.9 2,852,568 - MPMX20_02698 0.60 -4.2 2,852,568 - MPMX20_02698 0.60 -1.1 2,852,597 - MPMX20_02698 0.63 -4.9 2,852,671 - MPMX20_02698 0.70 -2.8 2,852,678 - MPMX20_02698 0.71 +0.2 2,852,678 - MPMX20_02698 0.71 -3.7 2,852,711 + MPMX20_02698 0.74 -0.3 2,852,752 - MPMX20_02698 0.77 -2.9 2,852,872 + MPMX20_02698 0.89 -4.8 2,852,934 + -2.6 2,852,934 + -3.1 2,852,942 - -4.5 2,852,985 - -3.1 2,852,995 - -4.0 2,852,995 - -4.4 2,852,998 + -2.8 2,853,125 - -3.2 2,853,127 + -4.4 2,853,127 + -2.1 2,853,135 - MPMX20_02699 0.10 -2.2 2,853,220 + MPMX20_02699 0.17 -4.9 2,853,300 + MPMX20_02699 0.23 -2.8 2,853,302 - MPMX20_02699 0.23 -2.8 2,853,467 + MPMX20_02699 0.36 -1.6 2,853,547 - MPMX20_02699 0.42 -0.7 2,853,594 - MPMX20_02699 0.46 -2.1 2,853,731 - MPMX20_02699 0.56 -3.6 2,853,756 + MPMX20_02699 0.58 -2.8 2,853,771 + MPMX20_02699 0.59 -4.4 2,853,777 + MPMX20_02699 0.60 -3.1 2,853,779 - MPMX20_02699 0.60 -3.1 2,853,779 - MPMX20_02699 0.60 -3.7 2,853,779 - MPMX20_02699 0.60 -1.7 2,853,803 - MPMX20_02699 0.62 -3.8 2,853,803 - MPMX20_02699 0.62 -5.0 2,853,881 - MPMX20_02699 0.68 -3.8 2,853,956 + MPMX20_02699 0.73 -2.2 2,853,976 + MPMX20_02699 0.75 -3.0 2,854,017 - MPMX20_02699 0.78 -4.9 2,854,044 + MPMX20_02699 0.80 -1.7 2,854,044 + MPMX20_02699 0.80 -2.4 2,854,044 + MPMX20_02699 0.80 -2.9 2,854,052 - MPMX20_02699 0.81 -4.3 2,854,052 - MPMX20_02699 0.81 -1.4 2,854,124 + MPMX20_02699 0.86 -1.1 2,854,201 - -4.0 2,854,205 - -3.7 2,854,227 - +1.3 2,854,278 - -1.6 2,854,278 - -4.1 2,854,296 + -0.3 2,854,298 + -2.6 2,854,344 + -2.3 2,854,468 + -2.2 2,854,578 - -0.2 2,854,606 + -0.4 2,854,610 - -1.9 2,854,610 - -0.5 2,854,634 - -0.7 2,854,656 - -0.9 2,854,661 - +0.2 2,854,661 - -0.5 2,854,752 + -1.3 2,854,760 - +0.5 2,854,776 + MPMX20_02700 0.10 +0.1 2,854,776 + MPMX20_02700 0.10 +0.1 2,854,776 - MPMX20_02700 0.10 +0.3 2,854,777 - MPMX20_02700 0.10 +0.0 2,854,784 - MPMX20_02700 0.11 -0.9 2,854,884 + MPMX20_02700 0.17 +1.3 2,854,917 + MPMX20_02700 0.19 -0.3 2,854,917 + MPMX20_02700 0.19 -1.3 2,854,924 + MPMX20_02700 0.20 -1.5 2,854,925 - MPMX20_02700 0.20 -0.6 2,854,925 - MPMX20_02700 0.20 -0.7 2,854,925 - MPMX20_02700 0.20 -1.4 2,854,935 - MPMX20_02700 0.20 -0.4 2,854,940 - MPMX20_02700 0.21 -1.1 2,854,964 - MPMX20_02700 0.22 +0.3 2,854,964 - MPMX20_02700 0.22 -0.1 2,854,982 + MPMX20_02700 0.23 -2.1 2,854,995 - MPMX20_02700 0.24 -1.1 2,855,012 - MPMX20_02700 0.25 +0.6 2,855,017 + MPMX20_02700 0.26 +1.5 2,855,037 + MPMX20_02700 0.27 -1.1 2,855,037 + MPMX20_02700 0.27 +0.1 2,855,169 - MPMX20_02700 0.36 +0.2 2,855,176 - MPMX20_02700 0.36 -3.1 2,855,240 - MPMX20_02700 0.40 +0.4 2,855,246 + MPMX20_02700 0.41 -1.1
Or see this region's nucleotide sequence