Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00081

Experiment: L-Alanine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00080 and MPMX20_00081 are separated by 60 nucleotidesMPMX20_00081 and MPMX20_00082 are separated by 119 nucleotides MPMX20_00080: MPMX20_00080 - Alpha-xylosidase, at 78,933 to 81,251 _00080 MPMX20_00081: MPMX20_00081 - hypothetical protein, at 81,312 to 83,015 _00081 MPMX20_00082: MPMX20_00082 - Xanthine permease XanP, at 83,135 to 84,526 _00082 Position (kb) 81 82 83 84Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 80.352 kb on - strand, within MPMX20_00080at 80.354 kb on - strand, within MPMX20_00080at 80.397 kb on - strand, within MPMX20_00080at 80.458 kb on + strand, within MPMX20_00080at 80.595 kb on - strand, within MPMX20_00080at 80.609 kb on - strand, within MPMX20_00080at 80.624 kb on + strand, within MPMX20_00080at 80.624 kb on + strand, within MPMX20_00080at 80.654 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.664 kb on + strand, within MPMX20_00080at 80.678 kb on + strand, within MPMX20_00080at 80.678 kb on + strand, within MPMX20_00080at 80.696 kb on - strand, within MPMX20_00080at 80.789 kb on - strand, within MPMX20_00080at 80.798 kb on + strand, within MPMX20_00080at 80.844 kb on - strand, within MPMX20_00080at 80.878 kb on + strand, within MPMX20_00080at 80.924 kb on + strand, within MPMX20_00080at 80.957 kb on + strand, within MPMX20_00080at 81.078 kb on + strandat 81.078 kb on + strandat 81.193 kb on + strandat 81.220 kb on - strandat 81.224 kb on + strandat 81.233 kb on - strandat 81.234 kb on - strandat 81.245 kb on + strandat 81.261 kb on + strandat 81.261 kb on + strandat 81.261 kb on + strandat 81.261 kb on + strandat 81.261 kb on + strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.269 kb on - strandat 81.294 kb on - strandat 81.429 kb on - strandat 81.431 kb on - strandat 81.433 kb on + strandat 81.433 kb on + strandat 81.441 kb on - strandat 81.489 kb on + strand, within MPMX20_00081at 81.535 kb on + strand, within MPMX20_00081at 81.553 kb on + strand, within MPMX20_00081at 81.637 kb on - strand, within MPMX20_00081at 81.704 kb on - strand, within MPMX20_00081at 81.711 kb on - strand, within MPMX20_00081at 81.722 kb on + strand, within MPMX20_00081at 81.725 kb on - strand, within MPMX20_00081at 81.738 kb on - strand, within MPMX20_00081at 81.876 kb on + strand, within MPMX20_00081at 81.930 kb on + strand, within MPMX20_00081at 81.930 kb on + strand, within MPMX20_00081at 81.938 kb on - strand, within MPMX20_00081at 81.938 kb on - strand, within MPMX20_00081at 81.943 kb on - strand, within MPMX20_00081at 82.001 kb on - strand, within MPMX20_00081at 82.102 kb on - strand, within MPMX20_00081at 82.134 kb on - strand, within MPMX20_00081at 82.150 kb on - strand, within MPMX20_00081at 82.172 kb on + strand, within MPMX20_00081at 82.172 kb on + strand, within MPMX20_00081at 82.187 kb on + strand, within MPMX20_00081at 82.187 kb on + strand, within MPMX20_00081at 82.215 kb on + strand, within MPMX20_00081at 82.232 kb on - strand, within MPMX20_00081at 82.244 kb on + strand, within MPMX20_00081at 82.278 kb on + strand, within MPMX20_00081at 82.278 kb on + strand, within MPMX20_00081at 82.278 kb on + strand, within MPMX20_00081at 82.286 kb on - strand, within MPMX20_00081at 82.301 kb on + strand, within MPMX20_00081at 82.322 kb on + strand, within MPMX20_00081at 82.369 kb on + strand, within MPMX20_00081at 82.379 kb on + strand, within MPMX20_00081at 82.382 kb on - strand, within MPMX20_00081at 82.387 kb on - strand, within MPMX20_00081at 82.451 kb on + strand, within MPMX20_00081at 82.454 kb on - strand, within MPMX20_00081at 82.456 kb on + strand, within MPMX20_00081at 82.493 kb on + strand, within MPMX20_00081at 82.493 kb on + strand, within MPMX20_00081at 82.493 kb on + strand, within MPMX20_00081at 82.493 kb on + strand, within MPMX20_00081at 82.493 kb on + strand, within MPMX20_00081at 82.501 kb on - strand, within MPMX20_00081at 82.502 kb on + strand, within MPMX20_00081at 82.536 kb on - strand, within MPMX20_00081at 82.546 kb on - strand, within MPMX20_00081at 82.573 kb on - strand, within MPMX20_00081at 82.591 kb on - strand, within MPMX20_00081at 82.617 kb on - strand, within MPMX20_00081at 82.620 kb on + strand, within MPMX20_00081at 82.628 kb on - strand, within MPMX20_00081at 82.628 kb on - strand, within MPMX20_00081at 82.628 kb on - strand, within MPMX20_00081at 82.654 kb on + strand, within MPMX20_00081at 82.662 kb on - strand, within MPMX20_00081at 82.670 kb on + strand, within MPMX20_00081at 82.696 kb on - strand, within MPMX20_00081at 82.699 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.709 kb on + strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.717 kb on - strand, within MPMX20_00081at 82.742 kb on + strand, within MPMX20_00081at 82.750 kb on - strand, within MPMX20_00081at 82.752 kb on + strand, within MPMX20_00081at 82.786 kb on - strand, within MPMX20_00081at 82.841 kb on - strand, within MPMX20_00081at 82.869 kb on + strandat 82.896 kb on - strandat 82.968 kb on + strandat 82.979 kb on + strandat 82.987 kb on - strandat 83.019 kb on + strandat 83.019 kb on + strandat 83.053 kb on - strandat 83.064 kb on - strandat 83.079 kb on - strandat 83.094 kb on - strandat 83.170 kb on - strandat 83.191 kb on + strandat 83.269 kb on + strandat 83.287 kb on + strand, within MPMX20_00082at 83.287 kb on + strand, within MPMX20_00082at 83.320 kb on - strand, within MPMX20_00082at 83.328 kb on - strand, within MPMX20_00082at 83.358 kb on + strand, within MPMX20_00082at 83.358 kb on + strand, within MPMX20_00082at 83.366 kb on - strand, within MPMX20_00082at 83.374 kb on + strand, within MPMX20_00082at 83.379 kb on + strand, within MPMX20_00082at 83.392 kb on - strand, within MPMX20_00082at 83.392 kb on - strand, within MPMX20_00082at 83.397 kb on - strand, within MPMX20_00082at 83.397 kb on - strand, within MPMX20_00082at 83.400 kb on + strand, within MPMX20_00082at 83.403 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.408 kb on - strand, within MPMX20_00082at 83.427 kb on + strand, within MPMX20_00082at 83.427 kb on + strand, within MPMX20_00082at 83.435 kb on - strand, within MPMX20_00082at 83.511 kb on - strand, within MPMX20_00082at 83.519 kb on - strand, within MPMX20_00082at 83.524 kb on - strand, within MPMX20_00082at 83.544 kb on + strand, within MPMX20_00082at 83.552 kb on - strand, within MPMX20_00082at 83.552 kb on - strand, within MPMX20_00082at 83.552 kb on - strand, within MPMX20_00082at 83.554 kb on + strand, within MPMX20_00082at 83.607 kb on + strand, within MPMX20_00082at 83.652 kb on - strand, within MPMX20_00082at 83.652 kb on - strand, within MPMX20_00082at 83.727 kb on + strand, within MPMX20_00082at 83.732 kb on + strand, within MPMX20_00082at 83.739 kb on + strand, within MPMX20_00082at 83.745 kb on - strand, within MPMX20_00082at 83.775 kb on + strand, within MPMX20_00082at 83.775 kb on + strand, within MPMX20_00082at 83.775 kb on + strand, within MPMX20_00082at 83.783 kb on - strand, within MPMX20_00082at 83.783 kb on - strand, within MPMX20_00082at 83.814 kb on + strand, within MPMX20_00082at 83.814 kb on + strand, within MPMX20_00082at 83.990 kb on + strand, within MPMX20_00082at 83.990 kb on + strand, within MPMX20_00082

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Alanine (N)
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80,352 - MPMX20_00080 0.61 -0.7
80,354 - MPMX20_00080 0.61 -0.9
80,397 - MPMX20_00080 0.63 -0.9
80,458 + MPMX20_00080 0.66 +1.0
80,595 - MPMX20_00080 0.72 +0.7
80,609 - MPMX20_00080 0.72 +0.2
80,624 + MPMX20_00080 0.73 -0.4
80,624 + MPMX20_00080 0.73 +0.3
80,654 + MPMX20_00080 0.74 +0.2
80,664 + MPMX20_00080 0.75 -0.8
80,664 + MPMX20_00080 0.75 +1.3
80,664 + MPMX20_00080 0.75 -0.5
80,664 + MPMX20_00080 0.75 -1.3
80,664 + MPMX20_00080 0.75 -0.5
80,664 + MPMX20_00080 0.75 -1.9
80,678 + MPMX20_00080 0.75 +0.7
80,678 + MPMX20_00080 0.75 -0.2
80,696 - MPMX20_00080 0.76 -1.3
80,789 - MPMX20_00080 0.80 -0.8
80,798 + MPMX20_00080 0.80 +0.8
80,844 - MPMX20_00080 0.82 -2.3
80,878 + MPMX20_00080 0.84 +0.6
80,924 + MPMX20_00080 0.86 -1.0
80,957 + MPMX20_00080 0.87 -0.9
81,078 + +0.1
81,078 + +0.7
81,193 + -1.1
81,220 - -2.3
81,224 + +0.8
81,233 - -1.2
81,234 - +0.3
81,245 + -0.6
81,261 + -1.0
81,261 + +0.8
81,261 + +0.7
81,261 + +0.4
81,261 + +0.1
81,269 - -0.1
81,269 - -2.1
81,269 - -0.7
81,269 - -0.5
81,269 - -0.8
81,269 - -0.2
81,269 - +0.7
81,269 - -0.7
81,269 - +0.2
81,269 - -0.3
81,269 - +0.1
81,294 - +0.1
81,429 - +0.1
81,431 - +0.9
81,433 + -0.4
81,433 + +0.4
81,441 - -1.3
81,489 + MPMX20_00081 0.10 +0.4
81,535 + MPMX20_00081 0.13 -0.3
81,553 + MPMX20_00081 0.14 +0.9
81,637 - MPMX20_00081 0.19 -0.5
81,704 - MPMX20_00081 0.23 +0.0
81,711 - MPMX20_00081 0.23 +1.3
81,722 + MPMX20_00081 0.24 -0.7
81,725 - MPMX20_00081 0.24 -0.1
81,738 - MPMX20_00081 0.25 -0.7
81,876 + MPMX20_00081 0.33 -0.5
81,930 + MPMX20_00081 0.36 -0.4
81,930 + MPMX20_00081 0.36 +0.3
81,938 - MPMX20_00081 0.37 +1.2
81,938 - MPMX20_00081 0.37 +1.1
81,943 - MPMX20_00081 0.37 +1.0
82,001 - MPMX20_00081 0.40 -1.9
82,102 - MPMX20_00081 0.46 +1.1
82,134 - MPMX20_00081 0.48 +1.0
82,150 - MPMX20_00081 0.49 -0.3
82,172 + MPMX20_00081 0.50 +1.1
82,172 + MPMX20_00081 0.50 +0.1
82,187 + MPMX20_00081 0.51 -1.1
82,187 + MPMX20_00081 0.51 +1.3
82,215 + MPMX20_00081 0.53 -0.7
82,232 - MPMX20_00081 0.54 -0.4
82,244 + MPMX20_00081 0.55 -0.7
82,278 + MPMX20_00081 0.57 -2.7
82,278 + MPMX20_00081 0.57 -0.2
82,278 + MPMX20_00081 0.57 +0.8
82,286 - MPMX20_00081 0.57 +0.8
82,301 + MPMX20_00081 0.58 +1.1
82,322 + MPMX20_00081 0.59 -1.3
82,369 + MPMX20_00081 0.62 +1.5
82,379 + MPMX20_00081 0.63 +0.7
82,382 - MPMX20_00081 0.63 +2.1
82,387 - MPMX20_00081 0.63 -0.6
82,451 + MPMX20_00081 0.67 -1.0
82,454 - MPMX20_00081 0.67 -0.1
82,456 + MPMX20_00081 0.67 +0.7
82,493 + MPMX20_00081 0.69 -0.9
82,493 + MPMX20_00081 0.69 +0.4
82,493 + MPMX20_00081 0.69 -0.2
82,493 + MPMX20_00081 0.69 +0.7
82,493 + MPMX20_00081 0.69 -0.3
82,501 - MPMX20_00081 0.70 -0.2
82,502 + MPMX20_00081 0.70 +0.1
82,536 - MPMX20_00081 0.72 +0.6
82,546 - MPMX20_00081 0.72 +1.1
82,573 - MPMX20_00081 0.74 -2.1
82,591 - MPMX20_00081 0.75 -0.5
82,617 - MPMX20_00081 0.77 +1.0
82,620 + MPMX20_00081 0.77 -0.3
82,628 - MPMX20_00081 0.77 +1.7
82,628 - MPMX20_00081 0.77 -0.7
82,628 - MPMX20_00081 0.77 +0.2
82,654 + MPMX20_00081 0.79 +0.9
82,662 - MPMX20_00081 0.79 +0.6
82,670 + MPMX20_00081 0.80 +0.6
82,696 - MPMX20_00081 0.81 +0.1
82,699 + MPMX20_00081 0.81 +0.7
82,709 + MPMX20_00081 0.82 +0.2
82,709 + MPMX20_00081 0.82 -1.9
82,709 + MPMX20_00081 0.82 -0.1
82,709 + MPMX20_00081 0.82 -1.0
82,709 + MPMX20_00081 0.82 -0.8
82,709 + MPMX20_00081 0.82 -1.0
82,709 + MPMX20_00081 0.82 -2.0
82,709 + MPMX20_00081 0.82 -1.3
82,709 + MPMX20_00081 0.82 -0.2
82,709 + MPMX20_00081 0.82 +0.0
82,709 + MPMX20_00081 0.82 -0.5
82,709 + MPMX20_00081 0.82 -0.1
82,709 + MPMX20_00081 0.82 -0.9
82,709 + MPMX20_00081 0.82 -0.4
82,709 + MPMX20_00081 0.82 -2.7
82,709 + MPMX20_00081 0.82 -0.1
82,709 + MPMX20_00081 0.82 -1.2
82,709 + MPMX20_00081 0.82 +0.1
82,709 + MPMX20_00081 0.82 -0.3
82,709 + MPMX20_00081 0.82 -1.0
82,709 + MPMX20_00081 0.82 +1.7
82,709 + MPMX20_00081 0.82 +0.0
82,717 - MPMX20_00081 0.82 +1.4
82,717 - MPMX20_00081 0.82 +0.8
82,717 - MPMX20_00081 0.82 -0.4
82,717 - MPMX20_00081 0.82 +0.9
82,717 - MPMX20_00081 0.82 +0.7
82,717 - MPMX20_00081 0.82 -1.3
82,717 - MPMX20_00081 0.82 +0.8
82,717 - MPMX20_00081 0.82 -0.2
82,717 - MPMX20_00081 0.82 -3.0
82,717 - MPMX20_00081 0.82 +0.1
82,717 - MPMX20_00081 0.82 +2.7
82,717 - MPMX20_00081 0.82 -0.1
82,717 - MPMX20_00081 0.82 +0.3
82,717 - MPMX20_00081 0.82 -2.3
82,717 - MPMX20_00081 0.82 -1.0
82,717 - MPMX20_00081 0.82 -0.7
82,742 + MPMX20_00081 0.84 +0.1
82,750 - MPMX20_00081 0.84 +1.5
82,752 + MPMX20_00081 0.85 -0.6
82,786 - MPMX20_00081 0.87 +0.6
82,841 - MPMX20_00081 0.90 +2.2
82,869 + +0.0
82,896 - -0.9
82,968 + -0.3
82,979 + -1.9
82,987 - -0.4
83,019 + +0.7
83,019 + +0.5
83,053 - -0.1
83,064 - +0.1
83,079 - -1.1
83,094 - -0.3
83,170 - +1.3
83,191 + +0.2
83,269 + -0.2
83,287 + MPMX20_00082 0.11 +0.2
83,287 + MPMX20_00082 0.11 +0.1
83,320 - MPMX20_00082 0.13 -0.2
83,328 - MPMX20_00082 0.14 -0.3
83,358 + MPMX20_00082 0.16 -0.7
83,358 + MPMX20_00082 0.16 -0.7
83,366 - MPMX20_00082 0.17 +0.6
83,374 + MPMX20_00082 0.17 -0.4
83,379 + MPMX20_00082 0.18 +0.9
83,392 - MPMX20_00082 0.18 +0.9
83,392 - MPMX20_00082 0.18 -0.1
83,397 - MPMX20_00082 0.19 +0.1
83,397 - MPMX20_00082 0.19 +0.7
83,400 + MPMX20_00082 0.19 -0.2
83,403 - MPMX20_00082 0.19 +1.9
83,408 - MPMX20_00082 0.20 +0.6
83,408 - MPMX20_00082 0.20 -0.1
83,408 - MPMX20_00082 0.20 -0.3
83,408 - MPMX20_00082 0.20 -1.2
83,408 - MPMX20_00082 0.20 +0.0
83,408 - MPMX20_00082 0.20 -0.2
83,427 + MPMX20_00082 0.21 +0.5
83,427 + MPMX20_00082 0.21 -1.1
83,435 - MPMX20_00082 0.22 +1.0
83,511 - MPMX20_00082 0.27 +0.5
83,519 - MPMX20_00082 0.28 +0.1
83,524 - MPMX20_00082 0.28 +0.5
83,544 + MPMX20_00082 0.29 -0.6
83,552 - MPMX20_00082 0.30 +0.3
83,552 - MPMX20_00082 0.30 +0.6
83,552 - MPMX20_00082 0.30 -0.4
83,554 + MPMX20_00082 0.30 -0.5
83,607 + MPMX20_00082 0.34 +0.2
83,652 - MPMX20_00082 0.37 +0.6
83,652 - MPMX20_00082 0.37 +3.1
83,727 + MPMX20_00082 0.43 -0.2
83,732 + MPMX20_00082 0.43 +0.1
83,739 + MPMX20_00082 0.43 -0.8
83,745 - MPMX20_00082 0.44 -1.9
83,775 + MPMX20_00082 0.46 +0.6
83,775 + MPMX20_00082 0.46 -0.8
83,775 + MPMX20_00082 0.46 -0.7
83,783 - MPMX20_00082 0.47 -0.3
83,783 - MPMX20_00082 0.47 +1.7
83,814 + MPMX20_00082 0.49 +0.1
83,814 + MPMX20_00082 0.49 +0.0
83,990 + MPMX20_00082 0.61 +0.5
83,990 + MPMX20_00082 0.61 -0.9

Or see this region's nucleotide sequence