Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03805 and MPMX20_03806 are separated by 86 nucleotides MPMX20_03806 and MPMX20_03807 overlap by 1 nucleotides MPMX20_03807 and MPMX20_03808 overlap by 35 nucleotides
MPMX20_03805: MPMX20_03805 - Glutathione synthetase, at 4,011,481 to 4,012,428
_03805
MPMX20_03806: MPMX20_03806 - hypothetical protein, at 4,012,515 to 4,013,075
_03806
MPMX20_03807: MPMX20_03807 - Putative pre-16S rRNA nuclease, at 4,013,075 to 4,013,491
_03807
MPMX20_03808: MPMX20_03808 - putative protein YggR, at 4,013,457 to 4,014,482
_03808
Position (kb)
4012
4013
4014 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4011.519 kb on + strand at 4011.527 kb on - strand at 4011.527 kb on - strand at 4011.555 kb on + strand at 4011.563 kb on - strand at 4011.563 kb on - strand at 4011.575 kb on + strand at 4011.590 kb on + strand, within MPMX20_03805 at 4011.590 kb on + strand, within MPMX20_03805 at 4011.590 kb on + strand, within MPMX20_03805 at 4011.613 kb on - strand, within MPMX20_03805 at 4011.613 kb on - strand, within MPMX20_03805 at 4011.702 kb on - strand, within MPMX20_03805 at 4011.702 kb on - strand, within MPMX20_03805 at 4011.709 kb on - strand, within MPMX20_03805 at 4011.717 kb on + strand, within MPMX20_03805 at 4011.765 kb on + strand, within MPMX20_03805 at 4011.783 kb on - strand, within MPMX20_03805 at 4011.789 kb on - strand, within MPMX20_03805 at 4011.834 kb on - strand, within MPMX20_03805 at 4011.842 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.855 kb on + strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.863 kb on - strand, within MPMX20_03805 at 4011.872 kb on + strand, within MPMX20_03805 at 4011.872 kb on + strand, within MPMX20_03805 at 4011.873 kb on - strand, within MPMX20_03805 at 4011.926 kb on - strand, within MPMX20_03805 at 4011.926 kb on - strand, within MPMX20_03805 at 4011.932 kb on + strand, within MPMX20_03805 at 4012.058 kb on - strand, within MPMX20_03805 at 4012.065 kb on - strand, within MPMX20_03805 at 4012.069 kb on + strand, within MPMX20_03805 at 4012.069 kb on + strand, within MPMX20_03805 at 4012.069 kb on + strand, within MPMX20_03805 at 4012.069 kb on + strand, within MPMX20_03805 at 4012.300 kb on - strand, within MPMX20_03805 at 4012.300 kb on - strand, within MPMX20_03805 at 4012.307 kb on + strand, within MPMX20_03805 at 4012.312 kb on + strand, within MPMX20_03805 at 4012.322 kb on + strand, within MPMX20_03805 at 4012.322 kb on + strand, within MPMX20_03805 at 4012.346 kb on + strand at 4012.385 kb on + strand at 4012.393 kb on - strand at 4012.395 kb on + strand at 4012.439 kb on - strand at 4012.478 kb on - strand at 4012.584 kb on + strand, within MPMX20_03806 at 4012.890 kb on + strand, within MPMX20_03806 at 4012.895 kb on + strand, within MPMX20_03806 at 4012.945 kb on + strand, within MPMX20_03806 at 4012.976 kb on - strand, within MPMX20_03806 at 4012.978 kb on - strand, within MPMX20_03806 at 4013.032 kb on + strand at 4013.069 kb on + strand at 4013.482 kb on + strand at 4013.482 kb on + strand at 4013.482 kb on + strand at 4013.482 kb on + strand at 4013.482 kb on + strand at 4013.490 kb on - strand at 4013.490 kb on - strand at 4013.490 kb on - strand at 4013.499 kb on + strand at 4013.530 kb on + strand at 4013.538 kb on - strand at 4013.548 kb on - strand at 4013.548 kb on - strand at 4013.553 kb on - strand at 4013.635 kb on + strand, within MPMX20_03808 at 4013.665 kb on + strand, within MPMX20_03808 at 4013.673 kb on - strand, within MPMX20_03808 at 4013.673 kb on - strand, within MPMX20_03808 at 4013.771 kb on - strand, within MPMX20_03808 at 4013.789 kb on + strand, within MPMX20_03808 at 4013.812 kb on + strand, within MPMX20_03808 at 4013.840 kb on - strand, within MPMX20_03808 at 4013.889 kb on - strand, within MPMX20_03808 at 4013.918 kb on - strand, within MPMX20_03808 at 4013.957 kb on - strand, within MPMX20_03808 at 4013.967 kb on + strand, within MPMX20_03808 at 4013.969 kb on + strand, within MPMX20_03808 at 4013.982 kb on - strand, within MPMX20_03808 at 4013.993 kb on + strand, within MPMX20_03808 at 4014.000 kb on - strand, within MPMX20_03808 at 4014.029 kb on - strand, within MPMX20_03808 at 4014.034 kb on - strand, within MPMX20_03808 at 4014.037 kb on + strand, within MPMX20_03808 at 4014.064 kb on + strand, within MPMX20_03808
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 4,011,519 + -0.5 4,011,527 - +0.3 4,011,527 - -0.7 4,011,555 + +1.2 4,011,563 - +1.3 4,011,563 - -1.6 4,011,575 + -0.8 4,011,590 + MPMX20_03805 0.11 -0.8 4,011,590 + MPMX20_03805 0.11 -1.3 4,011,590 + MPMX20_03805 0.11 -1.9 4,011,613 - MPMX20_03805 0.14 -1.0 4,011,613 - MPMX20_03805 0.14 -1.0 4,011,702 - MPMX20_03805 0.23 -2.0 4,011,702 - MPMX20_03805 0.23 -1.6 4,011,709 - MPMX20_03805 0.24 +0.1 4,011,717 + MPMX20_03805 0.25 -1.9 4,011,765 + MPMX20_03805 0.30 -0.1 4,011,783 - MPMX20_03805 0.32 +0.2 4,011,789 - MPMX20_03805 0.32 -2.6 4,011,834 - MPMX20_03805 0.37 -0.3 4,011,842 + MPMX20_03805 0.38 -1.7 4,011,855 + MPMX20_03805 0.39 -1.1 4,011,855 + MPMX20_03805 0.39 -1.5 4,011,855 + MPMX20_03805 0.39 -0.1 4,011,855 + MPMX20_03805 0.39 +1.0 4,011,855 + MPMX20_03805 0.39 -1.1 4,011,855 + MPMX20_03805 0.39 -0.2 4,011,855 + MPMX20_03805 0.39 -1.8 4,011,855 + MPMX20_03805 0.39 +0.3 4,011,855 + MPMX20_03805 0.39 -2.7 4,011,855 + MPMX20_03805 0.39 -1.3 4,011,863 - MPMX20_03805 0.40 -0.7 4,011,863 - MPMX20_03805 0.40 -1.3 4,011,863 - MPMX20_03805 0.40 -0.6 4,011,863 - MPMX20_03805 0.40 -0.3 4,011,863 - MPMX20_03805 0.40 -1.3 4,011,863 - MPMX20_03805 0.40 -0.5 4,011,863 - MPMX20_03805 0.40 +0.3 4,011,863 - MPMX20_03805 0.40 -0.7 4,011,863 - MPMX20_03805 0.40 -1.2 4,011,863 - MPMX20_03805 0.40 -1.1 4,011,863 - MPMX20_03805 0.40 -1.6 4,011,863 - MPMX20_03805 0.40 -1.2 4,011,863 - MPMX20_03805 0.40 -0.1 4,011,863 - MPMX20_03805 0.40 -0.8 4,011,872 + MPMX20_03805 0.41 +0.3 4,011,872 + MPMX20_03805 0.41 -1.7 4,011,873 - MPMX20_03805 0.41 -0.5 4,011,926 - MPMX20_03805 0.47 -0.5 4,011,926 - MPMX20_03805 0.47 +0.1 4,011,932 + MPMX20_03805 0.48 -1.0 4,012,058 - MPMX20_03805 0.61 -1.6 4,012,065 - MPMX20_03805 0.62 -2.2 4,012,069 + MPMX20_03805 0.62 -0.3 4,012,069 + MPMX20_03805 0.62 -1.1 4,012,069 + MPMX20_03805 0.62 -1.1 4,012,069 + MPMX20_03805 0.62 +0.6 4,012,300 - MPMX20_03805 0.86 +0.7 4,012,300 - MPMX20_03805 0.86 -1.1 4,012,307 + MPMX20_03805 0.87 +0.3 4,012,312 + MPMX20_03805 0.88 -0.4 4,012,322 + MPMX20_03805 0.89 +0.3 4,012,322 + MPMX20_03805 0.89 -2.7 4,012,346 + -1.4 4,012,385 + -0.5 4,012,393 - -0.8 4,012,395 + +0.3 4,012,439 - -0.1 4,012,478 - -1.5 4,012,584 + MPMX20_03806 0.12 -0.7 4,012,890 + MPMX20_03806 0.67 -1.9 4,012,895 + MPMX20_03806 0.68 -1.1 4,012,945 + MPMX20_03806 0.77 -0.7 4,012,976 - MPMX20_03806 0.82 -2.6 4,012,978 - MPMX20_03806 0.83 +0.3 4,013,032 + -0.9 4,013,069 + +0.2 4,013,482 + +0.5 4,013,482 + +0.1 4,013,482 + +1.3 4,013,482 + +0.5 4,013,482 + -1.8 4,013,490 - -0.6 4,013,490 - -1.4 4,013,490 - -0.7 4,013,499 + +0.3 4,013,530 + -1.2 4,013,538 - +0.7 4,013,548 - +0.9 4,013,548 - +0.1 4,013,553 - +0.3 4,013,635 + MPMX20_03808 0.17 -0.5 4,013,665 + MPMX20_03808 0.20 -1.8 4,013,673 - MPMX20_03808 0.21 +0.7 4,013,673 - MPMX20_03808 0.21 +1.1 4,013,771 - MPMX20_03808 0.31 +0.1 4,013,789 + MPMX20_03808 0.32 -0.3 4,013,812 + MPMX20_03808 0.35 -0.3 4,013,840 - MPMX20_03808 0.37 -4.2 4,013,889 - MPMX20_03808 0.42 +0.2 4,013,918 - MPMX20_03808 0.45 -2.1 4,013,957 - MPMX20_03808 0.49 -0.6 4,013,967 + MPMX20_03808 0.50 -0.5 4,013,969 + MPMX20_03808 0.50 -0.1 4,013,982 - MPMX20_03808 0.51 +0.7 4,013,993 + MPMX20_03808 0.52 +1.1 4,014,000 - MPMX20_03808 0.53 -1.5 4,014,029 - MPMX20_03808 0.56 +0.2 4,014,034 - MPMX20_03808 0.56 +0.2 4,014,037 + MPMX20_03808 0.57 +0.6 4,014,064 + MPMX20_03808 0.59 +0.1
Or see this region's nucleotide sequence