Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03806

Experiment: Glycine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03805 and MPMX20_03806 are separated by 86 nucleotidesMPMX20_03806 and MPMX20_03807 overlap by 1 nucleotidesMPMX20_03807 and MPMX20_03808 overlap by 35 nucleotides MPMX20_03805: MPMX20_03805 - Glutathione synthetase, at 4,011,481 to 4,012,428 _03805 MPMX20_03806: MPMX20_03806 - hypothetical protein, at 4,012,515 to 4,013,075 _03806 MPMX20_03807: MPMX20_03807 - Putative pre-16S rRNA nuclease, at 4,013,075 to 4,013,491 _03807 MPMX20_03808: MPMX20_03808 - putative protein YggR, at 4,013,457 to 4,014,482 _03808 Position (kb) 4012 4013 4014Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 4011.519 kb on + strandat 4011.527 kb on - strandat 4011.527 kb on - strandat 4011.555 kb on + strandat 4011.563 kb on - strandat 4011.563 kb on - strandat 4011.575 kb on + strandat 4011.590 kb on + strand, within MPMX20_03805at 4011.590 kb on + strand, within MPMX20_03805at 4011.590 kb on + strand, within MPMX20_03805at 4011.613 kb on - strand, within MPMX20_03805at 4011.613 kb on - strand, within MPMX20_03805at 4011.702 kb on - strand, within MPMX20_03805at 4011.702 kb on - strand, within MPMX20_03805at 4011.709 kb on - strand, within MPMX20_03805at 4011.717 kb on + strand, within MPMX20_03805at 4011.765 kb on + strand, within MPMX20_03805at 4011.783 kb on - strand, within MPMX20_03805at 4011.789 kb on - strand, within MPMX20_03805at 4011.834 kb on - strand, within MPMX20_03805at 4011.842 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.855 kb on + strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.863 kb on - strand, within MPMX20_03805at 4011.872 kb on + strand, within MPMX20_03805at 4011.872 kb on + strand, within MPMX20_03805at 4011.873 kb on - strand, within MPMX20_03805at 4011.926 kb on - strand, within MPMX20_03805at 4011.926 kb on - strand, within MPMX20_03805at 4011.932 kb on + strand, within MPMX20_03805at 4012.058 kb on - strand, within MPMX20_03805at 4012.065 kb on - strand, within MPMX20_03805at 4012.069 kb on + strand, within MPMX20_03805at 4012.069 kb on + strand, within MPMX20_03805at 4012.069 kb on + strand, within MPMX20_03805at 4012.069 kb on + strand, within MPMX20_03805at 4012.300 kb on - strand, within MPMX20_03805at 4012.300 kb on - strand, within MPMX20_03805at 4012.307 kb on + strand, within MPMX20_03805at 4012.312 kb on + strand, within MPMX20_03805at 4012.322 kb on + strand, within MPMX20_03805at 4012.322 kb on + strand, within MPMX20_03805at 4012.346 kb on + strandat 4012.385 kb on + strandat 4012.393 kb on - strandat 4012.395 kb on + strandat 4012.439 kb on - strandat 4012.478 kb on - strandat 4012.584 kb on + strand, within MPMX20_03806at 4012.890 kb on + strand, within MPMX20_03806at 4012.895 kb on + strand, within MPMX20_03806at 4012.945 kb on + strand, within MPMX20_03806at 4012.976 kb on - strand, within MPMX20_03806at 4012.978 kb on - strand, within MPMX20_03806at 4013.032 kb on + strandat 4013.069 kb on + strandat 4013.482 kb on + strandat 4013.482 kb on + strandat 4013.482 kb on + strandat 4013.482 kb on + strandat 4013.482 kb on + strandat 4013.490 kb on - strandat 4013.490 kb on - strandat 4013.490 kb on - strandat 4013.499 kb on + strandat 4013.530 kb on + strandat 4013.538 kb on - strandat 4013.548 kb on - strandat 4013.548 kb on - strandat 4013.553 kb on - strandat 4013.635 kb on + strand, within MPMX20_03808at 4013.665 kb on + strand, within MPMX20_03808at 4013.673 kb on - strand, within MPMX20_03808at 4013.673 kb on - strand, within MPMX20_03808at 4013.771 kb on - strand, within MPMX20_03808at 4013.789 kb on + strand, within MPMX20_03808at 4013.812 kb on + strand, within MPMX20_03808at 4013.840 kb on - strand, within MPMX20_03808at 4013.889 kb on - strand, within MPMX20_03808at 4013.918 kb on - strand, within MPMX20_03808at 4013.957 kb on - strand, within MPMX20_03808at 4013.967 kb on + strand, within MPMX20_03808at 4013.969 kb on + strand, within MPMX20_03808at 4013.982 kb on - strand, within MPMX20_03808at 4013.993 kb on + strand, within MPMX20_03808at 4014.000 kb on - strand, within MPMX20_03808at 4014.029 kb on - strand, within MPMX20_03808at 4014.034 kb on - strand, within MPMX20_03808at 4014.037 kb on + strand, within MPMX20_03808at 4014.064 kb on + strand, within MPMX20_03808

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycine (N)
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4,011,519 + -0.5
4,011,527 - +0.3
4,011,527 - -0.7
4,011,555 + +1.2
4,011,563 - +1.3
4,011,563 - -1.6
4,011,575 + -0.8
4,011,590 + MPMX20_03805 0.11 -0.8
4,011,590 + MPMX20_03805 0.11 -1.3
4,011,590 + MPMX20_03805 0.11 -1.9
4,011,613 - MPMX20_03805 0.14 -1.0
4,011,613 - MPMX20_03805 0.14 -1.0
4,011,702 - MPMX20_03805 0.23 -2.0
4,011,702 - MPMX20_03805 0.23 -1.6
4,011,709 - MPMX20_03805 0.24 +0.1
4,011,717 + MPMX20_03805 0.25 -1.9
4,011,765 + MPMX20_03805 0.30 -0.1
4,011,783 - MPMX20_03805 0.32 +0.2
4,011,789 - MPMX20_03805 0.32 -2.6
4,011,834 - MPMX20_03805 0.37 -0.3
4,011,842 + MPMX20_03805 0.38 -1.7
4,011,855 + MPMX20_03805 0.39 -1.1
4,011,855 + MPMX20_03805 0.39 -1.5
4,011,855 + MPMX20_03805 0.39 -0.1
4,011,855 + MPMX20_03805 0.39 +1.0
4,011,855 + MPMX20_03805 0.39 -1.1
4,011,855 + MPMX20_03805 0.39 -0.2
4,011,855 + MPMX20_03805 0.39 -1.8
4,011,855 + MPMX20_03805 0.39 +0.3
4,011,855 + MPMX20_03805 0.39 -2.7
4,011,855 + MPMX20_03805 0.39 -1.3
4,011,863 - MPMX20_03805 0.40 -0.7
4,011,863 - MPMX20_03805 0.40 -1.3
4,011,863 - MPMX20_03805 0.40 -0.6
4,011,863 - MPMX20_03805 0.40 -0.3
4,011,863 - MPMX20_03805 0.40 -1.3
4,011,863 - MPMX20_03805 0.40 -0.5
4,011,863 - MPMX20_03805 0.40 +0.3
4,011,863 - MPMX20_03805 0.40 -0.7
4,011,863 - MPMX20_03805 0.40 -1.2
4,011,863 - MPMX20_03805 0.40 -1.1
4,011,863 - MPMX20_03805 0.40 -1.6
4,011,863 - MPMX20_03805 0.40 -1.2
4,011,863 - MPMX20_03805 0.40 -0.1
4,011,863 - MPMX20_03805 0.40 -0.8
4,011,872 + MPMX20_03805 0.41 +0.3
4,011,872 + MPMX20_03805 0.41 -1.7
4,011,873 - MPMX20_03805 0.41 -0.5
4,011,926 - MPMX20_03805 0.47 -0.5
4,011,926 - MPMX20_03805 0.47 +0.1
4,011,932 + MPMX20_03805 0.48 -1.0
4,012,058 - MPMX20_03805 0.61 -1.6
4,012,065 - MPMX20_03805 0.62 -2.2
4,012,069 + MPMX20_03805 0.62 -0.3
4,012,069 + MPMX20_03805 0.62 -1.1
4,012,069 + MPMX20_03805 0.62 -1.1
4,012,069 + MPMX20_03805 0.62 +0.6
4,012,300 - MPMX20_03805 0.86 +0.7
4,012,300 - MPMX20_03805 0.86 -1.1
4,012,307 + MPMX20_03805 0.87 +0.3
4,012,312 + MPMX20_03805 0.88 -0.4
4,012,322 + MPMX20_03805 0.89 +0.3
4,012,322 + MPMX20_03805 0.89 -2.7
4,012,346 + -1.4
4,012,385 + -0.5
4,012,393 - -0.8
4,012,395 + +0.3
4,012,439 - -0.1
4,012,478 - -1.5
4,012,584 + MPMX20_03806 0.12 -0.7
4,012,890 + MPMX20_03806 0.67 -1.9
4,012,895 + MPMX20_03806 0.68 -1.1
4,012,945 + MPMX20_03806 0.77 -0.7
4,012,976 - MPMX20_03806 0.82 -2.6
4,012,978 - MPMX20_03806 0.83 +0.3
4,013,032 + -0.9
4,013,069 + +0.2
4,013,482 + +0.5
4,013,482 + +0.1
4,013,482 + +1.3
4,013,482 + +0.5
4,013,482 + -1.8
4,013,490 - -0.6
4,013,490 - -1.4
4,013,490 - -0.7
4,013,499 + +0.3
4,013,530 + -1.2
4,013,538 - +0.7
4,013,548 - +0.9
4,013,548 - +0.1
4,013,553 - +0.3
4,013,635 + MPMX20_03808 0.17 -0.5
4,013,665 + MPMX20_03808 0.20 -1.8
4,013,673 - MPMX20_03808 0.21 +0.7
4,013,673 - MPMX20_03808 0.21 +1.1
4,013,771 - MPMX20_03808 0.31 +0.1
4,013,789 + MPMX20_03808 0.32 -0.3
4,013,812 + MPMX20_03808 0.35 -0.3
4,013,840 - MPMX20_03808 0.37 -4.2
4,013,889 - MPMX20_03808 0.42 +0.2
4,013,918 - MPMX20_03808 0.45 -2.1
4,013,957 - MPMX20_03808 0.49 -0.6
4,013,967 + MPMX20_03808 0.50 -0.5
4,013,969 + MPMX20_03808 0.50 -0.1
4,013,982 - MPMX20_03808 0.51 +0.7
4,013,993 + MPMX20_03808 0.52 +1.1
4,014,000 - MPMX20_03808 0.53 -1.5
4,014,029 - MPMX20_03808 0.56 +0.2
4,014,034 - MPMX20_03808 0.56 +0.2
4,014,037 + MPMX20_03808 0.57 +0.6
4,014,064 + MPMX20_03808 0.59 +0.1

Or see this region's nucleotide sequence