Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03890

Experiment: L-Glutamine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX20_03889 and MPMX20_03890 are separated by 40 nucleotidesMPMX20_03890 and MPMX20_03891 are separated by 20 nucleotides MPMX20_03889: MPMX20_03889 - Bifunctional protein HldE, at 4,097,637 to 4,099,067 _03889 MPMX20_03890: MPMX20_03890 - Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme, at 4,099,108 to 4,101,963 _03890 MPMX20_03891: MPMX20_03891 - Inorganic triphosphatase, at 4,101,984 to 4,103,285 _03891 Position (kb) 4099 4100 4101 4102Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.157 kb on + strandat 4099.165 kb on - strandat 4099.165 kb on - strandat 4099.165 kb on - strandat 4099.184 kb on + strandat 4099.189 kb on + strandat 4099.202 kb on + strandat 4099.248 kb on + strandat 4099.261 kb on - strandat 4099.261 kb on - strandat 4099.261 kb on - strandat 4099.264 kb on + strandat 4099.322 kb on - strandat 4099.360 kb on + strandat 4099.363 kb on - strandat 4099.380 kb on - strandat 4099.380 kb on - strandat 4099.459 kb on + strand, within MPMX20_03890at 4099.505 kb on - strand, within MPMX20_03890at 4099.516 kb on - strand, within MPMX20_03890at 4099.582 kb on + strand, within MPMX20_03890at 4099.590 kb on - strand, within MPMX20_03890at 4099.598 kb on - strand, within MPMX20_03890at 4099.662 kb on + strand, within MPMX20_03890at 4099.670 kb on - strand, within MPMX20_03890at 4099.670 kb on - strand, within MPMX20_03890at 4099.670 kb on - strand, within MPMX20_03890at 4099.745 kb on + strand, within MPMX20_03890at 4099.745 kb on + strand, within MPMX20_03890at 4099.750 kb on + strand, within MPMX20_03890at 4099.768 kb on - strand, within MPMX20_03890at 4099.779 kb on - strand, within MPMX20_03890at 4099.794 kb on - strand, within MPMX20_03890at 4099.828 kb on - strand, within MPMX20_03890at 4099.896 kb on + strand, within MPMX20_03890at 4099.901 kb on + strand, within MPMX20_03890at 4099.972 kb on + strand, within MPMX20_03890at 4100.091 kb on + strand, within MPMX20_03890at 4100.183 kb on + strand, within MPMX20_03890at 4100.183 kb on - strand, within MPMX20_03890at 4100.250 kb on - strand, within MPMX20_03890at 4100.275 kb on + strand, within MPMX20_03890at 4100.460 kb on + strand, within MPMX20_03890at 4100.468 kb on - strand, within MPMX20_03890at 4100.546 kb on + strand, within MPMX20_03890at 4100.556 kb on - strand, within MPMX20_03890at 4100.581 kb on - strand, within MPMX20_03890at 4100.625 kb on + strand, within MPMX20_03890at 4100.652 kb on - strand, within MPMX20_03890at 4100.718 kb on + strand, within MPMX20_03890at 4100.726 kb on - strand, within MPMX20_03890at 4100.740 kb on + strand, within MPMX20_03890at 4100.744 kb on + strand, within MPMX20_03890at 4100.744 kb on + strand, within MPMX20_03890at 4100.744 kb on + strand, within MPMX20_03890at 4100.752 kb on - strand, within MPMX20_03890at 4100.764 kb on + strand, within MPMX20_03890at 4100.772 kb on - strand, within MPMX20_03890at 4100.772 kb on - strand, within MPMX20_03890at 4100.780 kb on + strand, within MPMX20_03890at 4100.786 kb on + strand, within MPMX20_03890at 4100.794 kb on - strand, within MPMX20_03890at 4100.794 kb on - strand, within MPMX20_03890at 4100.818 kb on - strand, within MPMX20_03890at 4100.849 kb on + strand, within MPMX20_03890at 4100.855 kb on + strand, within MPMX20_03890at 4100.867 kb on - strand, within MPMX20_03890at 4100.867 kb on - strand, within MPMX20_03890at 4100.929 kb on + strand, within MPMX20_03890at 4100.929 kb on + strand, within MPMX20_03890at 4100.937 kb on - strand, within MPMX20_03890at 4100.945 kb on - strand, within MPMX20_03890at 4100.954 kb on + strand, within MPMX20_03890at 4100.973 kb on + strand, within MPMX20_03890at 4101.022 kb on - strand, within MPMX20_03890at 4101.048 kb on + strand, within MPMX20_03890at 4101.056 kb on - strand, within MPMX20_03890at 4101.095 kb on - strand, within MPMX20_03890at 4101.115 kb on + strand, within MPMX20_03890at 4101.173 kb on + strand, within MPMX20_03890at 4101.193 kb on - strand, within MPMX20_03890at 4101.246 kb on + strand, within MPMX20_03890at 4101.253 kb on + strand, within MPMX20_03890at 4101.261 kb on - strand, within MPMX20_03890at 4101.292 kb on + strand, within MPMX20_03890at 4101.346 kb on + strand, within MPMX20_03890at 4101.346 kb on + strand, within MPMX20_03890at 4101.365 kb on - strand, within MPMX20_03890at 4101.376 kb on - strand, within MPMX20_03890at 4101.376 kb on - strand, within MPMX20_03890at 4101.408 kb on - strand, within MPMX20_03890at 4101.416 kb on - strand, within MPMX20_03890at 4101.428 kb on - strand, within MPMX20_03890at 4101.473 kb on + strand, within MPMX20_03890at 4101.496 kb on + strand, within MPMX20_03890at 4101.504 kb on - strand, within MPMX20_03890at 4101.515 kb on + strand, within MPMX20_03890at 4101.534 kb on + strand, within MPMX20_03890at 4101.538 kb on + strand, within MPMX20_03890at 4101.540 kb on - strand, within MPMX20_03890at 4101.546 kb on + strand, within MPMX20_03890at 4101.554 kb on - strand, within MPMX20_03890at 4101.554 kb on - strand, within MPMX20_03890at 4101.560 kb on + strand, within MPMX20_03890at 4101.605 kb on + strand, within MPMX20_03890at 4101.655 kb on + strand, within MPMX20_03890at 4101.661 kb on + strand, within MPMX20_03890at 4101.714 kb on - strandat 4101.732 kb on + strandat 4101.738 kb on - strandat 4101.804 kb on + strandat 4101.804 kb on + strandat 4101.812 kb on - strandat 4101.829 kb on + strandat 4101.866 kb on + strandat 4101.866 kb on + strandat 4101.866 kb on + strandat 4101.866 kb on + strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.874 kb on - strandat 4101.886 kb on + strandat 4101.915 kb on - strandat 4101.915 kb on - strandat 4101.968 kb on - strandat 4101.989 kb on - strandat 4102.080 kb on + strandat 4102.102 kb on + strandat 4102.110 kb on - strandat 4102.181 kb on + strand, within MPMX20_03891at 4102.189 kb on + strand, within MPMX20_03891at 4102.197 kb on - strand, within MPMX20_03891at 4102.240 kb on - strand, within MPMX20_03891at 4102.324 kb on - strand, within MPMX20_03891at 4102.403 kb on + strand, within MPMX20_03891at 4102.410 kb on - strand, within MPMX20_03891at 4102.487 kb on + strand, within MPMX20_03891at 4102.493 kb on + strand, within MPMX20_03891at 4102.556 kb on + strand, within MPMX20_03891at 4102.585 kb on - strand, within MPMX20_03891at 4102.609 kb on + strand, within MPMX20_03891at 4102.619 kb on + strand, within MPMX20_03891at 4102.619 kb on + strand, within MPMX20_03891at 4102.619 kb on + strand, within MPMX20_03891at 4102.627 kb on - strand, within MPMX20_03891at 4102.632 kb on - strand, within MPMX20_03891at 4102.694 kb on + strand, within MPMX20_03891at 4102.694 kb on + strand, within MPMX20_03891at 4102.719 kb on - strand, within MPMX20_03891at 4102.744 kb on - strand, within MPMX20_03891at 4102.776 kb on + strand, within MPMX20_03891at 4102.776 kb on + strand, within MPMX20_03891at 4102.782 kb on + strand, within MPMX20_03891at 4102.784 kb on - strand, within MPMX20_03891at 4102.784 kb on - strand, within MPMX20_03891at 4102.784 kb on - strand, within MPMX20_03891at 4102.789 kb on + strand, within MPMX20_03891at 4102.848 kb on - strand, within MPMX20_03891at 4102.878 kb on + strand, within MPMX20_03891

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
remove
4,099,157 + -0.3
4,099,157 + -0.5
4,099,157 + -2.0
4,099,157 + -2.8
4,099,157 + -1.2
4,099,157 + -1.6
4,099,157 + -1.9
4,099,165 - -1.0
4,099,165 - -0.7
4,099,165 - -1.1
4,099,184 + +0.0
4,099,189 + -1.0
4,099,202 + -2.7
4,099,248 + -0.8
4,099,261 - -1.1
4,099,261 - -1.7
4,099,261 - +0.0
4,099,264 + -1.8
4,099,322 - -1.0
4,099,360 + -1.0
4,099,363 - -0.7
4,099,380 - -3.2
4,099,380 - -2.1
4,099,459 + MPMX20_03890 0.12 -2.2
4,099,505 - MPMX20_03890 0.14 -1.3
4,099,516 - MPMX20_03890 0.14 -0.5
4,099,582 + MPMX20_03890 0.17 -1.2
4,099,590 - MPMX20_03890 0.17 -1.9
4,099,598 - MPMX20_03890 0.17 -3.2
4,099,662 + MPMX20_03890 0.19 -2.6
4,099,670 - MPMX20_03890 0.20 -1.3
4,099,670 - MPMX20_03890 0.20 +1.0
4,099,670 - MPMX20_03890 0.20 -1.0
4,099,745 + MPMX20_03890 0.22 +0.0
4,099,745 + MPMX20_03890 0.22 -3.6
4,099,750 + MPMX20_03890 0.22 +0.0
4,099,768 - MPMX20_03890 0.23 -1.5
4,099,779 - MPMX20_03890 0.23 -1.1
4,099,794 - MPMX20_03890 0.24 -0.5
4,099,828 - MPMX20_03890 0.25 -1.1
4,099,896 + MPMX20_03890 0.28 -1.3
4,099,901 + MPMX20_03890 0.28 -2.7
4,099,972 + MPMX20_03890 0.30 -1.1
4,100,091 + MPMX20_03890 0.34 -1.0
4,100,183 + MPMX20_03890 0.38 -0.3
4,100,183 - MPMX20_03890 0.38 -1.8
4,100,250 - MPMX20_03890 0.40 -1.7
4,100,275 + MPMX20_03890 0.41 -1.8
4,100,460 + MPMX20_03890 0.47 -1.8
4,100,468 - MPMX20_03890 0.48 -0.3
4,100,546 + MPMX20_03890 0.50 -1.6
4,100,556 - MPMX20_03890 0.51 -2.4
4,100,581 - MPMX20_03890 0.52 -0.4
4,100,625 + MPMX20_03890 0.53 -2.3
4,100,652 - MPMX20_03890 0.54 -1.2
4,100,718 + MPMX20_03890 0.56 -2.2
4,100,726 - MPMX20_03890 0.57 -1.5
4,100,740 + MPMX20_03890 0.57 -0.3
4,100,744 + MPMX20_03890 0.57 +0.7
4,100,744 + MPMX20_03890 0.57 -0.8
4,100,744 + MPMX20_03890 0.57 +0.1
4,100,752 - MPMX20_03890 0.58 -0.9
4,100,764 + MPMX20_03890 0.58 -3.2
4,100,772 - MPMX20_03890 0.58 -1.4
4,100,772 - MPMX20_03890 0.58 +0.5
4,100,780 + MPMX20_03890 0.59 -0.9
4,100,786 + MPMX20_03890 0.59 -3.0
4,100,794 - MPMX20_03890 0.59 +0.3
4,100,794 - MPMX20_03890 0.59 -1.0
4,100,818 - MPMX20_03890 0.60 -2.8
4,100,849 + MPMX20_03890 0.61 -0.4
4,100,855 + MPMX20_03890 0.61 +1.6
4,100,867 - MPMX20_03890 0.62 -1.1
4,100,867 - MPMX20_03890 0.62 -1.1
4,100,929 + MPMX20_03890 0.64 -1.1
4,100,929 + MPMX20_03890 0.64 -2.2
4,100,937 - MPMX20_03890 0.64 -1.0
4,100,945 - MPMX20_03890 0.64 -2.5
4,100,954 + MPMX20_03890 0.65 -1.7
4,100,973 + MPMX20_03890 0.65 -1.7
4,101,022 - MPMX20_03890 0.67 +0.2
4,101,048 + MPMX20_03890 0.68 -1.5
4,101,056 - MPMX20_03890 0.68 -2.9
4,101,095 - MPMX20_03890 0.70 -1.2
4,101,115 + MPMX20_03890 0.70 -1.6
4,101,173 + MPMX20_03890 0.72 -1.5
4,101,193 - MPMX20_03890 0.73 -1.1
4,101,246 + MPMX20_03890 0.75 -0.4
4,101,253 + MPMX20_03890 0.75 -0.7
4,101,261 - MPMX20_03890 0.75 -0.2
4,101,292 + MPMX20_03890 0.76 -0.9
4,101,346 + MPMX20_03890 0.78 +0.0
4,101,346 + MPMX20_03890 0.78 -0.9
4,101,365 - MPMX20_03890 0.79 -0.8
4,101,376 - MPMX20_03890 0.79 -0.8
4,101,376 - MPMX20_03890 0.79 +0.4
4,101,408 - MPMX20_03890 0.81 -2.5
4,101,416 - MPMX20_03890 0.81 +0.3
4,101,428 - MPMX20_03890 0.81 +1.1
4,101,473 + MPMX20_03890 0.83 -1.0
4,101,496 + MPMX20_03890 0.84 -2.3
4,101,504 - MPMX20_03890 0.84 -0.9
4,101,515 + MPMX20_03890 0.84 +1.8
4,101,534 + MPMX20_03890 0.85 -3.4
4,101,538 + MPMX20_03890 0.85 -1.1
4,101,540 - MPMX20_03890 0.85 -0.8
4,101,546 + MPMX20_03890 0.85 -1.9
4,101,554 - MPMX20_03890 0.86 -0.7
4,101,554 - MPMX20_03890 0.86 -2.4
4,101,560 + MPMX20_03890 0.86 +0.1
4,101,605 + MPMX20_03890 0.87 +0.1
4,101,655 + MPMX20_03890 0.89 -3.3
4,101,661 + MPMX20_03890 0.89 +0.3
4,101,714 - -2.4
4,101,732 + -1.3
4,101,738 - -1.8
4,101,804 + -2.8
4,101,804 + -0.8
4,101,812 - -2.8
4,101,829 + +1.7
4,101,866 + +0.7
4,101,866 + -1.2
4,101,866 + -1.7
4,101,866 + -1.1
4,101,874 - -0.8
4,101,874 - +1.9
4,101,874 - -1.8
4,101,874 - -1.1
4,101,874 - -0.7
4,101,874 - -0.2
4,101,874 - -0.3
4,101,874 - -0.4
4,101,874 - +1.1
4,101,874 - -0.3
4,101,874 - -0.8
4,101,886 + -0.3
4,101,915 - -0.3
4,101,915 - +1.2
4,101,968 - -0.6
4,101,989 - -1.3
4,102,080 + +0.0
4,102,102 + +2.3
4,102,110 - -1.0
4,102,181 + MPMX20_03891 0.15 -1.1
4,102,189 + MPMX20_03891 0.16 -0.5
4,102,197 - MPMX20_03891 0.16 +0.7
4,102,240 - MPMX20_03891 0.20 +0.0
4,102,324 - MPMX20_03891 0.26 -0.5
4,102,403 + MPMX20_03891 0.32 +0.2
4,102,410 - MPMX20_03891 0.33 +0.7
4,102,487 + MPMX20_03891 0.39 -0.3
4,102,493 + MPMX20_03891 0.39 -0.9
4,102,556 + MPMX20_03891 0.44 -0.1
4,102,585 - MPMX20_03891 0.46 +0.2
4,102,609 + MPMX20_03891 0.48 -0.7
4,102,619 + MPMX20_03891 0.49 +0.4
4,102,619 + MPMX20_03891 0.49 -1.8
4,102,619 + MPMX20_03891 0.49 +0.7
4,102,627 - MPMX20_03891 0.49 -0.5
4,102,632 - MPMX20_03891 0.50 +0.0
4,102,694 + MPMX20_03891 0.55 -0.3
4,102,694 + MPMX20_03891 0.55 -1.0
4,102,719 - MPMX20_03891 0.56 -1.2
4,102,744 - MPMX20_03891 0.58 +0.2
4,102,776 + MPMX20_03891 0.61 -0.6
4,102,776 + MPMX20_03891 0.61 -0.3
4,102,782 + MPMX20_03891 0.61 -0.1
4,102,784 - MPMX20_03891 0.61 +1.0
4,102,784 - MPMX20_03891 0.61 -0.2
4,102,784 - MPMX20_03891 0.61 +1.0
4,102,789 + MPMX20_03891 0.62 +0.3
4,102,848 - MPMX20_03891 0.66 +0.1
4,102,878 + MPMX20_03891 0.69 -0.4

Or see this region's nucleotide sequence