Experiment: L-Asparagine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01942 and MPMX20_01943 are separated by 313 nucleotides MPMX20_01943 and MPMX20_01944 are separated by 8 nucleotides MPMX20_01944 and MPMX20_01945 are separated by 9 nucleotides MPMX20_01945 and MPMX20_01946 overlap by 26 nucleotides
MPMX20_01942: MPMX20_01942 - HTH-type transcriptional repressor BluR, at 2,038,207 to 2,038,935
_01942
MPMX20_01943: MPMX20_01943 - Protein SufA, at 2,039,249 to 2,039,617
_01943
MPMX20_01944: MPMX20_01944 - FeS cluster assembly protein SufB, at 2,039,626 to 2,041,116
_01944
MPMX20_01945: MPMX20_01945 - putative ATP-dependent transporter SufC, at 2,041,126 to 2,041,872
_01945
MPMX20_01946: MPMX20_01946 - FeS cluster assembly protein SufD, at 2,041,847 to 2,043,118
_01946
Position (kb)
2039
2040
2041
2042 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2038.629 kb on + strand, within MPMX20_01942 at 2038.637 kb on - strand, within MPMX20_01942 at 2038.637 kb on - strand, within MPMX20_01942 at 2038.665 kb on - strand, within MPMX20_01942 at 2038.665 kb on - strand, within MPMX20_01942 at 2038.704 kb on + strand, within MPMX20_01942 at 2038.719 kb on - strand, within MPMX20_01942 at 2038.745 kb on - strand, within MPMX20_01942 at 2038.876 kb on - strand at 2038.906 kb on - strand at 2039.077 kb on + strand at 2039.119 kb on + strand at 2039.119 kb on + strand at 2039.127 kb on - strand at 2039.180 kb on + strand at 2039.180 kb on + strand at 2039.220 kb on - strand at 2039.230 kb on + strand at 2039.239 kb on + strand at 2039.247 kb on - strand at 2039.268 kb on + strand at 2039.276 kb on - strand at 2039.287 kb on + strand, within MPMX20_01943 at 2039.306 kb on - strand, within MPMX20_01943 at 2039.313 kb on - strand, within MPMX20_01943 at 2039.361 kb on + strand, within MPMX20_01943 at 2039.379 kb on + strand, within MPMX20_01943 at 2039.402 kb on + strand, within MPMX20_01943 at 2039.519 kb on + strand, within MPMX20_01943 at 2039.519 kb on + strand, within MPMX20_01943 at 2039.527 kb on - strand, within MPMX20_01943 at 2039.548 kb on - strand, within MPMX20_01943 at 2039.584 kb on - strand at 2039.605 kb on - strand at 2039.612 kb on - strand at 2039.621 kb on + strand at 2039.629 kb on - strand at 2039.828 kb on - strand, within MPMX20_01944 at 2039.897 kb on + strand, within MPMX20_01944 at 2039.900 kb on + strand, within MPMX20_01944 at 2039.902 kb on + strand, within MPMX20_01944 at 2039.933 kb on + strand, within MPMX20_01944 at 2039.958 kb on + strand, within MPMX20_01944 at 2040.013 kb on - strand, within MPMX20_01944 at 2040.045 kb on - strand, within MPMX20_01944 at 2040.155 kb on + strand, within MPMX20_01944 at 2040.198 kb on - strand, within MPMX20_01944 at 2040.341 kb on + strand, within MPMX20_01944 at 2040.349 kb on - strand, within MPMX20_01944 at 2040.399 kb on + strand, within MPMX20_01944 at 2040.418 kb on - strand, within MPMX20_01944 at 2040.425 kb on - strand, within MPMX20_01944 at 2040.432 kb on + strand, within MPMX20_01944 at 2040.463 kb on + strand, within MPMX20_01944 at 2040.473 kb on - strand, within MPMX20_01944 at 2040.478 kb on + strand, within MPMX20_01944 at 2040.478 kb on + strand, within MPMX20_01944 at 2040.486 kb on - strand, within MPMX20_01944 at 2040.486 kb on - strand, within MPMX20_01944 at 2040.486 kb on - strand, within MPMX20_01944 at 2040.504 kb on - strand, within MPMX20_01944 at 2040.517 kb on + strand, within MPMX20_01944 at 2040.525 kb on - strand, within MPMX20_01944 at 2040.525 kb on - strand, within MPMX20_01944 at 2040.536 kb on + strand, within MPMX20_01944 at 2040.536 kb on + strand, within MPMX20_01944 at 2040.544 kb on - strand, within MPMX20_01944 at 2040.544 kb on - strand, within MPMX20_01944 at 2040.544 kb on - strand, within MPMX20_01944 at 2040.546 kb on + strand, within MPMX20_01944 at 2040.553 kb on + strand, within MPMX20_01944 at 2040.561 kb on - strand, within MPMX20_01944 at 2040.578 kb on - strand, within MPMX20_01944 at 2040.620 kb on + strand, within MPMX20_01944 at 2040.628 kb on - strand, within MPMX20_01944 at 2040.628 kb on - strand, within MPMX20_01944 at 2040.644 kb on - strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.654 kb on + strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.662 kb on - strand, within MPMX20_01944 at 2040.670 kb on - strand, within MPMX20_01944 at 2040.729 kb on + strand, within MPMX20_01944 at 2040.771 kb on - strand, within MPMX20_01944 at 2040.772 kb on + strand, within MPMX20_01944 at 2040.790 kb on - strand, within MPMX20_01944 at 2040.793 kb on - strand, within MPMX20_01944 at 2040.795 kb on + strand, within MPMX20_01944 at 2040.795 kb on + strand, within MPMX20_01944 at 2040.830 kb on + strand, within MPMX20_01944 at 2040.838 kb on - strand, within MPMX20_01944 at 2040.838 kb on - strand, within MPMX20_01944 at 2040.838 kb on - strand, within MPMX20_01944 at 2040.838 kb on - strand, within MPMX20_01944 at 2040.874 kb on + strand, within MPMX20_01944 at 2040.918 kb on + strand, within MPMX20_01944 at 2040.926 kb on - strand, within MPMX20_01944 at 2040.935 kb on - strand, within MPMX20_01944 at 2040.963 kb on + strand, within MPMX20_01944 at 2040.973 kb on - strand at 2041.001 kb on - strand at 2041.036 kb on - strand at 2041.036 kb on - strand at 2041.088 kb on + strand at 2041.089 kb on + strand at 2041.094 kb on + strand at 2041.094 kb on + strand at 2041.183 kb on - strand at 2041.212 kb on - strand, within MPMX20_01945 at 2041.354 kb on + strand, within MPMX20_01945 at 2041.362 kb on - strand, within MPMX20_01945 at 2041.394 kb on + strand, within MPMX20_01945 at 2041.457 kb on + strand, within MPMX20_01945 at 2041.473 kb on - strand, within MPMX20_01945 at 2041.534 kb on + strand, within MPMX20_01945 at 2041.534 kb on + strand, within MPMX20_01945 at 2041.534 kb on + strand, within MPMX20_01945 at 2041.613 kb on + strand, within MPMX20_01945 at 2041.613 kb on + strand, within MPMX20_01945 at 2041.613 kb on + strand, within MPMX20_01945 at 2041.616 kb on - strand, within MPMX20_01945 at 2041.663 kb on + strand, within MPMX20_01945 at 2041.734 kb on + strand, within MPMX20_01945 at 2041.757 kb on - strand, within MPMX20_01945 at 2041.821 kb on + strand at 2041.821 kb on + strand at 2041.821 kb on + strand at 2041.829 kb on - strand at 2041.842 kb on + strand at 2041.842 kb on + strand at 2041.842 kb on + strand at 2041.844 kb on + strand at 2041.850 kb on - strand at 2041.866 kb on + strand at 2041.866 kb on + strand at 2041.874 kb on - strand at 2041.909 kb on + strand at 2042.025 kb on - strand, within MPMX20_01946 at 2042.050 kb on + strand, within MPMX20_01946 at 2042.077 kb on + strand, within MPMX20_01946
Per-strain Table
Position Strand Gene LocusTag Fraction L-Asparagine (N) remove 2,038,629 + MPMX20_01942 0.58 -0.6 2,038,637 - MPMX20_01942 0.59 -2.2 2,038,637 - MPMX20_01942 0.59 -1.5 2,038,665 - MPMX20_01942 0.63 -0.5 2,038,665 - MPMX20_01942 0.63 +0.1 2,038,704 + MPMX20_01942 0.68 -0.5 2,038,719 - MPMX20_01942 0.70 +1.1 2,038,745 - MPMX20_01942 0.74 -2.9 2,038,876 - -1.1 2,038,906 - -3.9 2,039,077 + -0.6 2,039,119 + -0.2 2,039,119 + +0.4 2,039,127 - +0.5 2,039,180 + -1.0 2,039,180 + -2.9 2,039,220 - -0.5 2,039,230 + -1.0 2,039,239 + +0.9 2,039,247 - -1.6 2,039,268 + -0.6 2,039,276 - -2.5 2,039,287 + MPMX20_01943 0.10 -0.3 2,039,306 - MPMX20_01943 0.15 -2.4 2,039,313 - MPMX20_01943 0.17 -0.3 2,039,361 + MPMX20_01943 0.30 -0.6 2,039,379 + MPMX20_01943 0.35 -0.5 2,039,402 + MPMX20_01943 0.41 -1.3 2,039,519 + MPMX20_01943 0.73 -3.2 2,039,519 + MPMX20_01943 0.73 -1.6 2,039,527 - MPMX20_01943 0.75 +0.4 2,039,548 - MPMX20_01943 0.81 -0.3 2,039,584 - +0.9 2,039,605 - -3.3 2,039,612 - -1.1 2,039,621 + +2.9 2,039,629 - -1.4 2,039,828 - MPMX20_01944 0.14 +0.6 2,039,897 + MPMX20_01944 0.18 +0.6 2,039,900 + MPMX20_01944 0.18 -0.9 2,039,902 + MPMX20_01944 0.19 +0.8 2,039,933 + MPMX20_01944 0.21 -0.6 2,039,958 + MPMX20_01944 0.22 +0.3 2,040,013 - MPMX20_01944 0.26 -0.1 2,040,045 - MPMX20_01944 0.28 -1.4 2,040,155 + MPMX20_01944 0.35 -1.6 2,040,198 - MPMX20_01944 0.38 -1.3 2,040,341 + MPMX20_01944 0.48 -0.2 2,040,349 - MPMX20_01944 0.48 -1.0 2,040,399 + MPMX20_01944 0.52 -0.1 2,040,418 - MPMX20_01944 0.53 -2.3 2,040,425 - MPMX20_01944 0.54 -1.4 2,040,432 + MPMX20_01944 0.54 -1.2 2,040,463 + MPMX20_01944 0.56 -2.0 2,040,473 - MPMX20_01944 0.57 +0.9 2,040,478 + MPMX20_01944 0.57 -0.8 2,040,478 + MPMX20_01944 0.57 -0.2 2,040,486 - MPMX20_01944 0.58 -1.3 2,040,486 - MPMX20_01944 0.58 +0.1 2,040,486 - MPMX20_01944 0.58 +0.3 2,040,504 - MPMX20_01944 0.59 -2.4 2,040,517 + MPMX20_01944 0.60 +0.2 2,040,525 - MPMX20_01944 0.60 +0.1 2,040,525 - MPMX20_01944 0.60 -0.0 2,040,536 + MPMX20_01944 0.61 -0.2 2,040,536 + MPMX20_01944 0.61 -3.0 2,040,544 - MPMX20_01944 0.62 -0.1 2,040,544 - MPMX20_01944 0.62 -0.3 2,040,544 - MPMX20_01944 0.62 -0.2 2,040,546 + MPMX20_01944 0.62 -0.2 2,040,553 + MPMX20_01944 0.62 +0.8 2,040,561 - MPMX20_01944 0.63 -0.5 2,040,578 - MPMX20_01944 0.64 +1.0 2,040,620 + MPMX20_01944 0.67 -0.2 2,040,628 - MPMX20_01944 0.67 -1.0 2,040,628 - MPMX20_01944 0.67 +0.4 2,040,644 - MPMX20_01944 0.68 -2.0 2,040,654 + MPMX20_01944 0.69 -0.3 2,040,654 + MPMX20_01944 0.69 -0.6 2,040,654 + MPMX20_01944 0.69 -0.5 2,040,654 + MPMX20_01944 0.69 -2.7 2,040,654 + MPMX20_01944 0.69 -0.3 2,040,654 + MPMX20_01944 0.69 -1.3 2,040,654 + MPMX20_01944 0.69 -1.6 2,040,662 - MPMX20_01944 0.69 +1.0 2,040,662 - MPMX20_01944 0.69 -1.3 2,040,662 - MPMX20_01944 0.69 -2.2 2,040,662 - MPMX20_01944 0.69 -0.9 2,040,662 - MPMX20_01944 0.69 -1.3 2,040,662 - MPMX20_01944 0.69 +0.0 2,040,670 - MPMX20_01944 0.70 -0.2 2,040,729 + MPMX20_01944 0.74 -0.1 2,040,771 - MPMX20_01944 0.77 -0.4 2,040,772 + MPMX20_01944 0.77 -1.3 2,040,790 - MPMX20_01944 0.78 -2.6 2,040,793 - MPMX20_01944 0.78 -1.4 2,040,795 + MPMX20_01944 0.78 -0.8 2,040,795 + MPMX20_01944 0.78 -1.2 2,040,830 + MPMX20_01944 0.81 -1.1 2,040,838 - MPMX20_01944 0.81 -0.3 2,040,838 - MPMX20_01944 0.81 -0.6 2,040,838 - MPMX20_01944 0.81 -0.8 2,040,838 - MPMX20_01944 0.81 -0.6 2,040,874 + MPMX20_01944 0.84 -1.6 2,040,918 + MPMX20_01944 0.87 -0.7 2,040,926 - MPMX20_01944 0.87 -0.6 2,040,935 - MPMX20_01944 0.88 -3.0 2,040,963 + MPMX20_01944 0.90 +0.1 2,040,973 - -2.7 2,041,001 - -1.0 2,041,036 - +0.7 2,041,036 - -1.2 2,041,088 + -2.1 2,041,089 + +0.7 2,041,094 + -2.0 2,041,094 + +0.7 2,041,183 - -0.8 2,041,212 - MPMX20_01945 0.12 -1.4 2,041,354 + MPMX20_01945 0.31 -1.5 2,041,362 - MPMX20_01945 0.32 -1.0 2,041,394 + MPMX20_01945 0.36 -1.3 2,041,457 + MPMX20_01945 0.44 -1.6 2,041,473 - MPMX20_01945 0.46 -0.2 2,041,534 + MPMX20_01945 0.55 -1.2 2,041,534 + MPMX20_01945 0.55 -0.3 2,041,534 + MPMX20_01945 0.55 -0.6 2,041,613 + MPMX20_01945 0.65 +0.6 2,041,613 + MPMX20_01945 0.65 -0.2 2,041,613 + MPMX20_01945 0.65 -0.8 2,041,616 - MPMX20_01945 0.66 -0.2 2,041,663 + MPMX20_01945 0.72 +1.4 2,041,734 + MPMX20_01945 0.81 +0.2 2,041,757 - MPMX20_01945 0.84 +0.3 2,041,821 + +0.6 2,041,821 + -0.6 2,041,821 + +2.0 2,041,829 - +0.0 2,041,842 + +0.7 2,041,842 + -1.3 2,041,842 + +0.7 2,041,844 + +1.4 2,041,850 - +0.5 2,041,866 + -1.1 2,041,866 + -1.2 2,041,874 - +0.7 2,041,909 + +0.3 2,042,025 - MPMX20_01946 0.14 -1.3 2,042,050 + MPMX20_01946 0.16 -1.0 2,042,077 + MPMX20_01946 0.18 -1.8
Or see this region's nucleotide sequence