Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_00987

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_00985 and MPMX20_00986 are separated by 187 nucleotidesMPMX20_00986 and MPMX20_00987 are separated by 21 nucleotidesMPMX20_00987 and MPMX20_00988 are separated by 409 nucleotides MPMX20_00985: MPMX20_00985 - Nuclease SbcCD subunit D, at 1,036,761 to 1,037,966 _00985 MPMX20_00986: MPMX20_00986 - Phosphate regulon transcriptional regulatory protein PhoB, at 1,038,154 to 1,038,843 _00986 MPMX20_00987: MPMX20_00987 - Phosphate regulon sensor protein PhoR, at 1,038,865 to 1,040,160 _00987 MPMX20_00988: MPMX20_00988 - Branched-chain amino acid transport system 2 carrier protein, at 1,040,570 to 1,041,889 _00988 Position (kb) 1038 1039 1040 1041Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1037.895 kb on + strandat 1037.903 kb on - strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.942 kb on + strandat 1037.949 kb on + strandat 1037.949 kb on + strandat 1037.950 kb on + strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.950 kb on - strandat 1037.957 kb on - strandat 1037.962 kb on - strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.966 kb on + strandat 1037.974 kb on - strandat 1037.974 kb on - strandat 1037.991 kb on + strandat 1038.006 kb on - strandat 1038.027 kb on - strandat 1038.052 kb on + strandat 1038.053 kb on + strandat 1038.108 kb on - strandat 1038.135 kb on + strandat 1038.143 kb on - strandat 1038.143 kb on - strandat 1038.153 kb on - strandat 1038.160 kb on - strandat 1038.161 kb on + strandat 1038.169 kb on - strandat 1038.195 kb on - strandat 1038.204 kb on + strandat 1038.212 kb on - strandat 1038.222 kb on - strandat 1038.246 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.253 kb on + strand, within MPMX20_00986at 1038.261 kb on - strand, within MPMX20_00986at 1038.261 kb on - strand, within MPMX20_00986at 1038.293 kb on - strand, within MPMX20_00986at 1038.293 kb on - strand, within MPMX20_00986at 1038.295 kb on + strand, within MPMX20_00986at 1038.298 kb on - strand, within MPMX20_00986at 1038.312 kb on - strand, within MPMX20_00986at 1038.329 kb on + strand, within MPMX20_00986at 1038.329 kb on + strand, within MPMX20_00986at 1038.352 kb on + strand, within MPMX20_00986at 1038.442 kb on - strand, within MPMX20_00986at 1038.476 kb on + strand, within MPMX20_00986at 1038.484 kb on - strand, within MPMX20_00986at 1038.506 kb on - strand, within MPMX20_00986at 1038.506 kb on - strand, within MPMX20_00986at 1038.506 kb on - strand, within MPMX20_00986at 1038.560 kb on - strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.566 kb on + strand, within MPMX20_00986at 1038.567 kb on - strand, within MPMX20_00986at 1038.569 kb on - strand, within MPMX20_00986at 1038.570 kb on + strand, within MPMX20_00986at 1038.574 kb on - strand, within MPMX20_00986at 1038.574 kb on - strand, within MPMX20_00986at 1038.574 kb on - strand, within MPMX20_00986at 1038.574 kb on - strand, within MPMX20_00986at 1038.577 kb on + strand, within MPMX20_00986at 1038.577 kb on + strand, within MPMX20_00986at 1038.577 kb on + strand, within MPMX20_00986at 1038.577 kb on + strand, within MPMX20_00986at 1038.577 kb on + strand, within MPMX20_00986at 1038.585 kb on - strand, within MPMX20_00986at 1038.585 kb on - strand, within MPMX20_00986at 1038.585 kb on - strand, within MPMX20_00986at 1038.648 kb on + strand, within MPMX20_00986at 1038.677 kb on + strand, within MPMX20_00986at 1038.775 kb on - strandat 1038.790 kb on - strandat 1038.848 kb on + strandat 1038.896 kb on + strandat 1038.896 kb on + strandat 1038.896 kb on + strandat 1038.896 kb on + strandat 1038.904 kb on - strandat 1039.011 kb on - strand, within MPMX20_00987at 1039.032 kb on + strand, within MPMX20_00987at 1039.040 kb on - strand, within MPMX20_00987at 1039.097 kb on - strand, within MPMX20_00987at 1039.097 kb on - strand, within MPMX20_00987at 1039.105 kb on - strand, within MPMX20_00987at 1039.263 kb on + strand, within MPMX20_00987at 1039.285 kb on - strand, within MPMX20_00987at 1039.292 kb on + strand, within MPMX20_00987at 1039.305 kb on + strand, within MPMX20_00987at 1039.412 kb on + strand, within MPMX20_00987at 1039.412 kb on - strand, within MPMX20_00987at 1039.422 kb on - strand, within MPMX20_00987at 1039.469 kb on - strand, within MPMX20_00987at 1039.469 kb on - strand, within MPMX20_00987at 1039.494 kb on + strand, within MPMX20_00987at 1039.535 kb on - strand, within MPMX20_00987at 1039.535 kb on - strand, within MPMX20_00987at 1039.536 kb on - strand, within MPMX20_00987at 1039.541 kb on - strand, within MPMX20_00987at 1039.571 kb on - strand, within MPMX20_00987at 1039.625 kb on - strand, within MPMX20_00987at 1039.686 kb on + strand, within MPMX20_00987at 1039.694 kb on - strand, within MPMX20_00987at 1039.694 kb on - strand, within MPMX20_00987at 1039.742 kb on + strand, within MPMX20_00987at 1039.795 kb on - strand, within MPMX20_00987at 1039.818 kb on - strand, within MPMX20_00987at 1039.884 kb on - strand, within MPMX20_00987at 1039.915 kb on + strand, within MPMX20_00987at 1039.915 kb on + strand, within MPMX20_00987at 1039.917 kb on + strand, within MPMX20_00987at 1039.929 kb on + strand, within MPMX20_00987at 1040.027 kb on + strand, within MPMX20_00987at 1040.027 kb on + strand, within MPMX20_00987at 1040.083 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.097 kb on + strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.105 kb on - strandat 1040.110 kb on + strandat 1040.125 kb on - strandat 1040.318 kb on + strandat 1040.372 kb on + strandat 1040.421 kb on - strandat 1040.425 kb on - strandat 1040.454 kb on + strandat 1040.603 kb on + strandat 1040.611 kb on - strandat 1040.619 kb on + strandat 1040.678 kb on - strandat 1040.689 kb on + strandat 1040.689 kb on + strandat 1040.689 kb on + strandat 1040.689 kb on + strandat 1040.689 kb on + strandat 1040.689 kb on + strandat 1040.697 kb on - strandat 1040.710 kb on - strand, within MPMX20_00988at 1040.733 kb on + strand, within MPMX20_00988at 1040.738 kb on + strand, within MPMX20_00988at 1040.793 kb on - strand, within MPMX20_00988at 1040.876 kb on - strand, within MPMX20_00988at 1040.887 kb on - strand, within MPMX20_00988at 1041.078 kb on - strand, within MPMX20_00988at 1041.091 kb on - strand, within MPMX20_00988

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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1,037,895 + +0.5
1,037,903 - +1.0
1,037,942 + -0.6
1,037,942 + -0.6
1,037,942 + -0.2
1,037,942 + -0.8
1,037,942 + -1.3
1,037,942 + +0.1
1,037,942 + +0.3
1,037,942 + +0.6
1,037,942 + +0.3
1,037,942 + -0.4
1,037,942 + +0.6
1,037,942 + +0.1
1,037,942 + -0.4
1,037,942 + -0.3
1,037,942 + +0.8
1,037,942 + +0.6
1,037,942 + -1.4
1,037,942 + -3.2
1,037,942 + +0.3
1,037,942 + -0.5
1,037,949 + -0.7
1,037,949 + +0.4
1,037,950 + -0.6
1,037,950 - +0.6
1,037,950 - -0.2
1,037,950 - +0.1
1,037,950 - -1.4
1,037,950 - +1.4
1,037,950 - -0.8
1,037,950 - +0.4
1,037,957 - +0.5
1,037,962 - -2.0
1,037,966 + +0.5
1,037,966 + +0.2
1,037,966 + -0.5
1,037,966 + +0.5
1,037,966 + -1.2
1,037,966 + -0.0
1,037,966 + -0.3
1,037,966 + +0.6
1,037,966 + +3.1
1,037,974 - -0.2
1,037,974 - -1.8
1,037,991 + -1.0
1,038,006 - +0.2
1,038,027 - +0.0
1,038,052 + +0.6
1,038,053 + +0.8
1,038,108 - -0.3
1,038,135 + -1.3
1,038,143 - -1.4
1,038,143 - -0.3
1,038,153 - -1.1
1,038,160 - -1.9
1,038,161 + -0.3
1,038,169 - +2.0
1,038,195 - -0.4
1,038,204 + -1.0
1,038,212 - +1.7
1,038,222 - -0.7
1,038,246 + MPMX20_00986 0.13 -0.2
1,038,253 + MPMX20_00986 0.14 +1.2
1,038,253 + MPMX20_00986 0.14 +0.5
1,038,253 + MPMX20_00986 0.14 +0.4
1,038,253 + MPMX20_00986 0.14 -0.8
1,038,253 + MPMX20_00986 0.14 -0.2
1,038,253 + MPMX20_00986 0.14 +0.0
1,038,253 + MPMX20_00986 0.14 +0.9
1,038,261 - MPMX20_00986 0.16 +0.7
1,038,261 - MPMX20_00986 0.16 -0.6
1,038,293 - MPMX20_00986 0.20 -0.2
1,038,293 - MPMX20_00986 0.20 -2.5
1,038,295 + MPMX20_00986 0.20 -0.4
1,038,298 - MPMX20_00986 0.21 +0.2
1,038,312 - MPMX20_00986 0.23 -0.7
1,038,329 + MPMX20_00986 0.25 -0.7
1,038,329 + MPMX20_00986 0.25 -1.3
1,038,352 + MPMX20_00986 0.29 -0.9
1,038,442 - MPMX20_00986 0.42 -1.0
1,038,476 + MPMX20_00986 0.47 +0.8
1,038,484 - MPMX20_00986 0.48 +0.2
1,038,506 - MPMX20_00986 0.51 +0.6
1,038,506 - MPMX20_00986 0.51 -1.0
1,038,506 - MPMX20_00986 0.51 +0.5
1,038,560 - MPMX20_00986 0.59 +0.3
1,038,566 + MPMX20_00986 0.60 -1.8
1,038,566 + MPMX20_00986 0.60 -0.6
1,038,566 + MPMX20_00986 0.60 +0.7
1,038,566 + MPMX20_00986 0.60 +0.2
1,038,566 + MPMX20_00986 0.60 -0.1
1,038,566 + MPMX20_00986 0.60 +1.0
1,038,567 - MPMX20_00986 0.60 -0.5
1,038,569 - MPMX20_00986 0.60 -0.9
1,038,570 + MPMX20_00986 0.60 +0.9
1,038,574 - MPMX20_00986 0.61 -0.1
1,038,574 - MPMX20_00986 0.61 -3.3
1,038,574 - MPMX20_00986 0.61 -1.8
1,038,574 - MPMX20_00986 0.61 +0.7
1,038,577 + MPMX20_00986 0.61 -1.4
1,038,577 + MPMX20_00986 0.61 +1.1
1,038,577 + MPMX20_00986 0.61 -0.1
1,038,577 + MPMX20_00986 0.61 -2.1
1,038,577 + MPMX20_00986 0.61 -0.0
1,038,585 - MPMX20_00986 0.62 -0.5
1,038,585 - MPMX20_00986 0.62 +1.1
1,038,585 - MPMX20_00986 0.62 -0.7
1,038,648 + MPMX20_00986 0.72 -0.2
1,038,677 + MPMX20_00986 0.76 -3.5
1,038,775 - -0.9
1,038,790 - -1.0
1,038,848 + +0.0
1,038,896 + +0.6
1,038,896 + -1.2
1,038,896 + +0.1
1,038,896 + -0.7
1,038,904 - -1.6
1,039,011 - MPMX20_00987 0.11 -0.2
1,039,032 + MPMX20_00987 0.13 -0.7
1,039,040 - MPMX20_00987 0.14 -0.2
1,039,097 - MPMX20_00987 0.18 -0.6
1,039,097 - MPMX20_00987 0.18 -0.8
1,039,105 - MPMX20_00987 0.19 -1.2
1,039,263 + MPMX20_00987 0.31 -0.0
1,039,285 - MPMX20_00987 0.32 -0.8
1,039,292 + MPMX20_00987 0.33 -0.0
1,039,305 + MPMX20_00987 0.34 +0.5
1,039,412 + MPMX20_00987 0.42 -1.8
1,039,412 - MPMX20_00987 0.42 +1.6
1,039,422 - MPMX20_00987 0.43 -3.0
1,039,469 - MPMX20_00987 0.47 -2.1
1,039,469 - MPMX20_00987 0.47 -0.2
1,039,494 + MPMX20_00987 0.49 +0.4
1,039,535 - MPMX20_00987 0.52 -0.6
1,039,535 - MPMX20_00987 0.52 -0.1
1,039,536 - MPMX20_00987 0.52 +1.1
1,039,541 - MPMX20_00987 0.52 -2.0
1,039,571 - MPMX20_00987 0.54 +0.3
1,039,625 - MPMX20_00987 0.59 -1.4
1,039,686 + MPMX20_00987 0.63 -0.6
1,039,694 - MPMX20_00987 0.64 -0.9
1,039,694 - MPMX20_00987 0.64 -0.6
1,039,742 + MPMX20_00987 0.68 -0.5
1,039,795 - MPMX20_00987 0.72 +1.5
1,039,818 - MPMX20_00987 0.74 +1.7
1,039,884 - MPMX20_00987 0.79 -0.2
1,039,915 + MPMX20_00987 0.81 +0.3
1,039,915 + MPMX20_00987 0.81 -0.6
1,039,917 + MPMX20_00987 0.81 +1.9
1,039,929 + MPMX20_00987 0.82 -0.0
1,040,027 + MPMX20_00987 0.90 -0.5
1,040,027 + MPMX20_00987 0.90 +0.2
1,040,083 + +1.4
1,040,097 + +0.9
1,040,097 + +0.5
1,040,097 + +1.7
1,040,097 + +0.7
1,040,097 + +0.2
1,040,097 + +0.1
1,040,097 + -0.8
1,040,105 - -0.7
1,040,105 - -0.2
1,040,105 - -0.8
1,040,105 - -0.8
1,040,105 - -0.4
1,040,105 - -0.1
1,040,105 - -0.7
1,040,105 - +1.0
1,040,110 + -0.9
1,040,125 - +0.9
1,040,318 + +2.1
1,040,372 + -0.2
1,040,421 - -1.2
1,040,425 - +0.9
1,040,454 + -1.3
1,040,603 + -0.5
1,040,611 - +2.6
1,040,619 + -0.2
1,040,678 - +0.1
1,040,689 + -0.9
1,040,689 + -1.0
1,040,689 + +0.3
1,040,689 + +0.6
1,040,689 + +0.2
1,040,689 + -1.5
1,040,697 - -0.7
1,040,710 - MPMX20_00988 0.11 -1.8
1,040,733 + MPMX20_00988 0.12 -0.7
1,040,738 + MPMX20_00988 0.13 -1.0
1,040,793 - MPMX20_00988 0.17 -1.3
1,040,876 - MPMX20_00988 0.23 -1.5
1,040,887 - MPMX20_00988 0.24 -3.3
1,041,078 - MPMX20_00988 0.38 -1.3
1,041,091 - MPMX20_00988 0.39 -2.8

Or see this region's nucleotide sequence