Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_00985 and MPMX20_00986 are separated by 187 nucleotides MPMX20_00986 and MPMX20_00987 are separated by 21 nucleotides MPMX20_00987 and MPMX20_00988 are separated by 409 nucleotides
MPMX20_00985: MPMX20_00985 - Nuclease SbcCD subunit D, at 1,036,761 to 1,037,966
_00985
MPMX20_00986: MPMX20_00986 - Phosphate regulon transcriptional regulatory protein PhoB, at 1,038,154 to 1,038,843
_00986
MPMX20_00987: MPMX20_00987 - Phosphate regulon sensor protein PhoR, at 1,038,865 to 1,040,160
_00987
MPMX20_00988: MPMX20_00988 - Branched-chain amino acid transport system 2 carrier protein, at 1,040,570 to 1,041,889
_00988
Position (kb)
1038
1039
1040
1041 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1037.895 kb on + strand at 1037.903 kb on - strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.942 kb on + strand at 1037.949 kb on + strand at 1037.949 kb on + strand at 1037.950 kb on + strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.950 kb on - strand at 1037.957 kb on - strand at 1037.962 kb on - strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.966 kb on + strand at 1037.974 kb on - strand at 1037.974 kb on - strand at 1037.991 kb on + strand at 1038.006 kb on - strand at 1038.027 kb on - strand at 1038.052 kb on + strand at 1038.053 kb on + strand at 1038.108 kb on - strand at 1038.135 kb on + strand at 1038.143 kb on - strand at 1038.143 kb on - strand at 1038.153 kb on - strand at 1038.160 kb on - strand at 1038.161 kb on + strand at 1038.169 kb on - strand at 1038.195 kb on - strand at 1038.204 kb on + strand at 1038.212 kb on - strand at 1038.222 kb on - strand at 1038.246 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.253 kb on + strand, within MPMX20_00986 at 1038.261 kb on - strand, within MPMX20_00986 at 1038.261 kb on - strand, within MPMX20_00986 at 1038.293 kb on - strand, within MPMX20_00986 at 1038.293 kb on - strand, within MPMX20_00986 at 1038.295 kb on + strand, within MPMX20_00986 at 1038.298 kb on - strand, within MPMX20_00986 at 1038.312 kb on - strand, within MPMX20_00986 at 1038.329 kb on + strand, within MPMX20_00986 at 1038.329 kb on + strand, within MPMX20_00986 at 1038.352 kb on + strand, within MPMX20_00986 at 1038.442 kb on - strand, within MPMX20_00986 at 1038.476 kb on + strand, within MPMX20_00986 at 1038.484 kb on - strand, within MPMX20_00986 at 1038.506 kb on - strand, within MPMX20_00986 at 1038.506 kb on - strand, within MPMX20_00986 at 1038.506 kb on - strand, within MPMX20_00986 at 1038.560 kb on - strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.566 kb on + strand, within MPMX20_00986 at 1038.567 kb on - strand, within MPMX20_00986 at 1038.569 kb on - strand, within MPMX20_00986 at 1038.570 kb on + strand, within MPMX20_00986 at 1038.574 kb on - strand, within MPMX20_00986 at 1038.574 kb on - strand, within MPMX20_00986 at 1038.574 kb on - strand, within MPMX20_00986 at 1038.574 kb on - strand, within MPMX20_00986 at 1038.577 kb on + strand, within MPMX20_00986 at 1038.577 kb on + strand, within MPMX20_00986 at 1038.577 kb on + strand, within MPMX20_00986 at 1038.577 kb on + strand, within MPMX20_00986 at 1038.577 kb on + strand, within MPMX20_00986 at 1038.585 kb on - strand, within MPMX20_00986 at 1038.585 kb on - strand, within MPMX20_00986 at 1038.585 kb on - strand, within MPMX20_00986 at 1038.648 kb on + strand, within MPMX20_00986 at 1038.677 kb on + strand, within MPMX20_00986 at 1038.775 kb on - strand at 1038.790 kb on - strand at 1038.848 kb on + strand at 1038.896 kb on + strand at 1038.896 kb on + strand at 1038.896 kb on + strand at 1038.896 kb on + strand at 1038.904 kb on - strand at 1039.011 kb on - strand, within MPMX20_00987 at 1039.032 kb on + strand, within MPMX20_00987 at 1039.040 kb on - strand, within MPMX20_00987 at 1039.097 kb on - strand, within MPMX20_00987 at 1039.097 kb on - strand, within MPMX20_00987 at 1039.105 kb on - strand, within MPMX20_00987 at 1039.263 kb on + strand, within MPMX20_00987 at 1039.285 kb on - strand, within MPMX20_00987 at 1039.292 kb on + strand, within MPMX20_00987 at 1039.305 kb on + strand, within MPMX20_00987 at 1039.412 kb on + strand, within MPMX20_00987 at 1039.412 kb on - strand, within MPMX20_00987 at 1039.422 kb on - strand, within MPMX20_00987 at 1039.469 kb on - strand, within MPMX20_00987 at 1039.469 kb on - strand, within MPMX20_00987 at 1039.494 kb on + strand, within MPMX20_00987 at 1039.535 kb on - strand, within MPMX20_00987 at 1039.535 kb on - strand, within MPMX20_00987 at 1039.536 kb on - strand, within MPMX20_00987 at 1039.541 kb on - strand, within MPMX20_00987 at 1039.571 kb on - strand, within MPMX20_00987 at 1039.625 kb on - strand, within MPMX20_00987 at 1039.686 kb on + strand, within MPMX20_00987 at 1039.694 kb on - strand, within MPMX20_00987 at 1039.694 kb on - strand, within MPMX20_00987 at 1039.742 kb on + strand, within MPMX20_00987 at 1039.795 kb on - strand, within MPMX20_00987 at 1039.818 kb on - strand, within MPMX20_00987 at 1039.884 kb on - strand, within MPMX20_00987 at 1039.915 kb on + strand, within MPMX20_00987 at 1039.915 kb on + strand, within MPMX20_00987 at 1039.917 kb on + strand, within MPMX20_00987 at 1039.929 kb on + strand, within MPMX20_00987 at 1040.027 kb on + strand, within MPMX20_00987 at 1040.027 kb on + strand, within MPMX20_00987 at 1040.083 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.097 kb on + strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.105 kb on - strand at 1040.110 kb on + strand at 1040.125 kb on - strand at 1040.318 kb on + strand at 1040.372 kb on + strand at 1040.421 kb on - strand at 1040.425 kb on - strand at 1040.454 kb on + strand at 1040.603 kb on + strand at 1040.611 kb on - strand at 1040.619 kb on + strand at 1040.678 kb on - strand at 1040.689 kb on + strand at 1040.689 kb on + strand at 1040.689 kb on + strand at 1040.689 kb on + strand at 1040.689 kb on + strand at 1040.689 kb on + strand at 1040.697 kb on - strand at 1040.710 kb on - strand, within MPMX20_00988 at 1040.733 kb on + strand, within MPMX20_00988 at 1040.738 kb on + strand, within MPMX20_00988 at 1040.793 kb on - strand, within MPMX20_00988 at 1040.876 kb on - strand, within MPMX20_00988 at 1040.887 kb on - strand, within MPMX20_00988 at 1041.078 kb on - strand, within MPMX20_00988 at 1041.091 kb on - strand, within MPMX20_00988
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,037,895 + +0.5 1,037,903 - +1.0 1,037,942 + -0.6 1,037,942 + -0.6 1,037,942 + -0.2 1,037,942 + -0.8 1,037,942 + -1.3 1,037,942 + +0.1 1,037,942 + +0.3 1,037,942 + +0.6 1,037,942 + +0.3 1,037,942 + -0.4 1,037,942 + +0.6 1,037,942 + +0.1 1,037,942 + -0.4 1,037,942 + -0.3 1,037,942 + +0.8 1,037,942 + +0.6 1,037,942 + -1.4 1,037,942 + -3.2 1,037,942 + +0.3 1,037,942 + -0.5 1,037,949 + -0.7 1,037,949 + +0.4 1,037,950 + -0.6 1,037,950 - +0.6 1,037,950 - -0.2 1,037,950 - +0.1 1,037,950 - -1.4 1,037,950 - +1.4 1,037,950 - -0.8 1,037,950 - +0.4 1,037,957 - +0.5 1,037,962 - -2.0 1,037,966 + +0.5 1,037,966 + +0.2 1,037,966 + -0.5 1,037,966 + +0.5 1,037,966 + -1.2 1,037,966 + -0.0 1,037,966 + -0.3 1,037,966 + +0.6 1,037,966 + +3.1 1,037,974 - -0.2 1,037,974 - -1.8 1,037,991 + -1.0 1,038,006 - +0.2 1,038,027 - +0.0 1,038,052 + +0.6 1,038,053 + +0.8 1,038,108 - -0.3 1,038,135 + -1.3 1,038,143 - -1.4 1,038,143 - -0.3 1,038,153 - -1.1 1,038,160 - -1.9 1,038,161 + -0.3 1,038,169 - +2.0 1,038,195 - -0.4 1,038,204 + -1.0 1,038,212 - +1.7 1,038,222 - -0.7 1,038,246 + MPMX20_00986 0.13 -0.2 1,038,253 + MPMX20_00986 0.14 +1.2 1,038,253 + MPMX20_00986 0.14 +0.5 1,038,253 + MPMX20_00986 0.14 +0.4 1,038,253 + MPMX20_00986 0.14 -0.8 1,038,253 + MPMX20_00986 0.14 -0.2 1,038,253 + MPMX20_00986 0.14 +0.0 1,038,253 + MPMX20_00986 0.14 +0.9 1,038,261 - MPMX20_00986 0.16 +0.7 1,038,261 - MPMX20_00986 0.16 -0.6 1,038,293 - MPMX20_00986 0.20 -0.2 1,038,293 - MPMX20_00986 0.20 -2.5 1,038,295 + MPMX20_00986 0.20 -0.4 1,038,298 - MPMX20_00986 0.21 +0.2 1,038,312 - MPMX20_00986 0.23 -0.7 1,038,329 + MPMX20_00986 0.25 -0.7 1,038,329 + MPMX20_00986 0.25 -1.3 1,038,352 + MPMX20_00986 0.29 -0.9 1,038,442 - MPMX20_00986 0.42 -1.0 1,038,476 + MPMX20_00986 0.47 +0.8 1,038,484 - MPMX20_00986 0.48 +0.2 1,038,506 - MPMX20_00986 0.51 +0.6 1,038,506 - MPMX20_00986 0.51 -1.0 1,038,506 - MPMX20_00986 0.51 +0.5 1,038,560 - MPMX20_00986 0.59 +0.3 1,038,566 + MPMX20_00986 0.60 -1.8 1,038,566 + MPMX20_00986 0.60 -0.6 1,038,566 + MPMX20_00986 0.60 +0.7 1,038,566 + MPMX20_00986 0.60 +0.2 1,038,566 + MPMX20_00986 0.60 -0.1 1,038,566 + MPMX20_00986 0.60 +1.0 1,038,567 - MPMX20_00986 0.60 -0.5 1,038,569 - MPMX20_00986 0.60 -0.9 1,038,570 + MPMX20_00986 0.60 +0.9 1,038,574 - MPMX20_00986 0.61 -0.1 1,038,574 - MPMX20_00986 0.61 -3.3 1,038,574 - MPMX20_00986 0.61 -1.8 1,038,574 - MPMX20_00986 0.61 +0.7 1,038,577 + MPMX20_00986 0.61 -1.4 1,038,577 + MPMX20_00986 0.61 +1.1 1,038,577 + MPMX20_00986 0.61 -0.1 1,038,577 + MPMX20_00986 0.61 -2.1 1,038,577 + MPMX20_00986 0.61 -0.0 1,038,585 - MPMX20_00986 0.62 -0.5 1,038,585 - MPMX20_00986 0.62 +1.1 1,038,585 - MPMX20_00986 0.62 -0.7 1,038,648 + MPMX20_00986 0.72 -0.2 1,038,677 + MPMX20_00986 0.76 -3.5 1,038,775 - -0.9 1,038,790 - -1.0 1,038,848 + +0.0 1,038,896 + +0.6 1,038,896 + -1.2 1,038,896 + +0.1 1,038,896 + -0.7 1,038,904 - -1.6 1,039,011 - MPMX20_00987 0.11 -0.2 1,039,032 + MPMX20_00987 0.13 -0.7 1,039,040 - MPMX20_00987 0.14 -0.2 1,039,097 - MPMX20_00987 0.18 -0.6 1,039,097 - MPMX20_00987 0.18 -0.8 1,039,105 - MPMX20_00987 0.19 -1.2 1,039,263 + MPMX20_00987 0.31 -0.0 1,039,285 - MPMX20_00987 0.32 -0.8 1,039,292 + MPMX20_00987 0.33 -0.0 1,039,305 + MPMX20_00987 0.34 +0.5 1,039,412 + MPMX20_00987 0.42 -1.8 1,039,412 - MPMX20_00987 0.42 +1.6 1,039,422 - MPMX20_00987 0.43 -3.0 1,039,469 - MPMX20_00987 0.47 -2.1 1,039,469 - MPMX20_00987 0.47 -0.2 1,039,494 + MPMX20_00987 0.49 +0.4 1,039,535 - MPMX20_00987 0.52 -0.6 1,039,535 - MPMX20_00987 0.52 -0.1 1,039,536 - MPMX20_00987 0.52 +1.1 1,039,541 - MPMX20_00987 0.52 -2.0 1,039,571 - MPMX20_00987 0.54 +0.3 1,039,625 - MPMX20_00987 0.59 -1.4 1,039,686 + MPMX20_00987 0.63 -0.6 1,039,694 - MPMX20_00987 0.64 -0.9 1,039,694 - MPMX20_00987 0.64 -0.6 1,039,742 + MPMX20_00987 0.68 -0.5 1,039,795 - MPMX20_00987 0.72 +1.5 1,039,818 - MPMX20_00987 0.74 +1.7 1,039,884 - MPMX20_00987 0.79 -0.2 1,039,915 + MPMX20_00987 0.81 +0.3 1,039,915 + MPMX20_00987 0.81 -0.6 1,039,917 + MPMX20_00987 0.81 +1.9 1,039,929 + MPMX20_00987 0.82 -0.0 1,040,027 + MPMX20_00987 0.90 -0.5 1,040,027 + MPMX20_00987 0.90 +0.2 1,040,083 + +1.4 1,040,097 + +0.9 1,040,097 + +0.5 1,040,097 + +1.7 1,040,097 + +0.7 1,040,097 + +0.2 1,040,097 + +0.1 1,040,097 + -0.8 1,040,105 - -0.7 1,040,105 - -0.2 1,040,105 - -0.8 1,040,105 - -0.8 1,040,105 - -0.4 1,040,105 - -0.1 1,040,105 - -0.7 1,040,105 - +1.0 1,040,110 + -0.9 1,040,125 - +0.9 1,040,318 + +2.1 1,040,372 + -0.2 1,040,421 - -1.2 1,040,425 - +0.9 1,040,454 + -1.3 1,040,603 + -0.5 1,040,611 - +2.6 1,040,619 + -0.2 1,040,678 - +0.1 1,040,689 + -0.9 1,040,689 + -1.0 1,040,689 + +0.3 1,040,689 + +0.6 1,040,689 + +0.2 1,040,689 + -1.5 1,040,697 - -0.7 1,040,710 - MPMX20_00988 0.11 -1.8 1,040,733 + MPMX20_00988 0.12 -0.7 1,040,738 + MPMX20_00988 0.13 -1.0 1,040,793 - MPMX20_00988 0.17 -1.3 1,040,876 - MPMX20_00988 0.23 -1.5 1,040,887 - MPMX20_00988 0.24 -3.3 1,041,078 - MPMX20_00988 0.38 -1.3 1,041,091 - MPMX20_00988 0.39 -2.8
Or see this region's nucleotide sequence