Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_02935

Experiment: L-Histidine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_02933 and MPMX20_02934 are separated by 26 nucleotidesMPMX20_02934 and MPMX20_02935 are separated by 228 nucleotidesMPMX20_02935 and MPMX20_02936 overlap by 8 nucleotidesMPMX20_02936 and MPMX20_02937 overlap by 8 nucleotides MPMX20_02933: MPMX20_02933 - Putative defective protein IntQ, at 3,063,075 to 3,064,370 _02933 MPMX20_02934: MPMX20_02934 - Flagellar hook-basal body complex protein FliE, at 3,064,397 to 3,064,708 _02934 MPMX20_02935: MPMX20_02935 - Flagellar M-ring protein, at 3,064,937 to 3,066,616 _02935 MPMX20_02936: MPMX20_02936 - Flagellar motor switch protein FliG, at 3,066,609 to 3,067,607 _02936 MPMX20_02937: MPMX20_02937 - Flagellar assembly protein FliH, at 3,067,600 to 3,068,307 _02937 Position (kb) 3064 3065 3066 3067Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3063.979 kb on - strand, within MPMX20_02933at 3063.979 kb on - strand, within MPMX20_02933at 3063.990 kb on - strand, within MPMX20_02933at 3064.041 kb on + strand, within MPMX20_02933at 3064.064 kb on - strand, within MPMX20_02933at 3064.076 kb on + strand, within MPMX20_02933at 3064.084 kb on - strand, within MPMX20_02933at 3064.093 kb on + strand, within MPMX20_02933at 3064.101 kb on - strand, within MPMX20_02933at 3064.103 kb on + strand, within MPMX20_02933at 3064.147 kb on + strand, within MPMX20_02933at 3064.155 kb on - strand, within MPMX20_02933at 3064.203 kb on - strand, within MPMX20_02933at 3064.240 kb on + strand, within MPMX20_02933at 3064.240 kb on + strand, within MPMX20_02933at 3064.248 kb on - strandat 3064.337 kb on - strandat 3064.395 kb on + strandat 3064.403 kb on - strandat 3064.403 kb on - strandat 3064.428 kb on + strandat 3064.458 kb on - strand, within MPMX20_02934at 3064.555 kb on + strand, within MPMX20_02934at 3064.598 kb on + strand, within MPMX20_02934at 3064.601 kb on - strand, within MPMX20_02934at 3064.601 kb on - strand, within MPMX20_02934at 3064.606 kb on - strand, within MPMX20_02934at 3064.640 kb on - strand, within MPMX20_02934at 3064.673 kb on - strand, within MPMX20_02934at 3064.687 kb on + strandat 3064.687 kb on + strandat 3064.689 kb on + strandat 3064.697 kb on - strandat 3064.699 kb on + strandat 3064.712 kb on - strandat 3064.715 kb on + strandat 3064.744 kb on - strandat 3064.927 kb on - strandat 3064.930 kb on - strandat 3064.939 kb on + strandat 3064.941 kb on + strandat 3064.941 kb on + strandat 3064.949 kb on - strandat 3064.998 kb on - strandat 3065.079 kb on + strandat 3065.103 kb on - strandat 3065.108 kb on - strand, within MPMX20_02935at 3065.119 kb on + strand, within MPMX20_02935at 3065.119 kb on + strand, within MPMX20_02935at 3065.127 kb on - strand, within MPMX20_02935at 3065.141 kb on - strand, within MPMX20_02935at 3065.142 kb on + strand, within MPMX20_02935at 3065.259 kb on - strand, within MPMX20_02935at 3065.314 kb on - strand, within MPMX20_02935at 3065.329 kb on + strand, within MPMX20_02935at 3065.337 kb on - strand, within MPMX20_02935at 3065.383 kb on + strand, within MPMX20_02935at 3065.414 kb on + strand, within MPMX20_02935at 3065.420 kb on - strand, within MPMX20_02935at 3065.421 kb on - strand, within MPMX20_02935at 3065.440 kb on + strand, within MPMX20_02935at 3065.473 kb on + strand, within MPMX20_02935at 3065.473 kb on + strand, within MPMX20_02935at 3065.481 kb on - strand, within MPMX20_02935at 3065.602 kb on + strand, within MPMX20_02935at 3065.602 kb on + strand, within MPMX20_02935at 3065.610 kb on - strand, within MPMX20_02935at 3065.610 kb on - strand, within MPMX20_02935at 3065.774 kb on + strand, within MPMX20_02935at 3065.782 kb on - strand, within MPMX20_02935at 3065.782 kb on - strand, within MPMX20_02935at 3065.782 kb on - strand, within MPMX20_02935at 3065.782 kb on - strand, within MPMX20_02935at 3065.822 kb on + strand, within MPMX20_02935at 3065.845 kb on + strand, within MPMX20_02935at 3065.882 kb on + strand, within MPMX20_02935at 3065.882 kb on + strand, within MPMX20_02935at 3065.988 kb on + strand, within MPMX20_02935at 3065.996 kb on - strand, within MPMX20_02935at 3066.068 kb on - strand, within MPMX20_02935at 3066.117 kb on - strand, within MPMX20_02935at 3066.201 kb on - strand, within MPMX20_02935at 3066.220 kb on + strand, within MPMX20_02935at 3066.249 kb on + strand, within MPMX20_02935at 3066.249 kb on - strand, within MPMX20_02935at 3066.259 kb on - strand, within MPMX20_02935at 3066.355 kb on + strand, within MPMX20_02935at 3066.424 kb on + strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.432 kb on - strand, within MPMX20_02935at 3066.498 kb on + strandat 3066.498 kb on + strandat 3066.498 kb on + strandat 3066.498 kb on + strandat 3066.515 kb on - strandat 3066.524 kb on + strandat 3066.570 kb on + strandat 3066.606 kb on + strandat 3066.650 kb on + strandat 3066.686 kb on - strandat 3066.769 kb on + strand, within MPMX20_02936at 3066.772 kb on - strand, within MPMX20_02936at 3066.787 kb on - strand, within MPMX20_02936at 3066.804 kb on - strand, within MPMX20_02936at 3066.854 kb on + strand, within MPMX20_02936at 3066.854 kb on + strand, within MPMX20_02936at 3066.857 kb on - strand, within MPMX20_02936at 3066.868 kb on + strand, within MPMX20_02936at 3066.936 kb on - strand, within MPMX20_02936at 3066.951 kb on - strand, within MPMX20_02936at 3066.964 kb on + strand, within MPMX20_02936at 3067.019 kb on + strand, within MPMX20_02936at 3067.086 kb on - strand, within MPMX20_02936at 3067.108 kb on - strand, within MPMX20_02936at 3067.108 kb on - strand, within MPMX20_02936at 3067.110 kb on + strand, within MPMX20_02936at 3067.156 kb on - strand, within MPMX20_02936at 3067.397 kb on + strand, within MPMX20_02936at 3067.441 kb on + strand, within MPMX20_02936at 3067.590 kb on + strandat 3067.590 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Histidine (N)
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3,063,979 - MPMX20_02933 0.70 +1.8
3,063,979 - MPMX20_02933 0.70 +1.5
3,063,990 - MPMX20_02933 0.71 +0.3
3,064,041 + MPMX20_02933 0.75 -0.9
3,064,064 - MPMX20_02933 0.76 +0.7
3,064,076 + MPMX20_02933 0.77 +0.5
3,064,084 - MPMX20_02933 0.78 +1.5
3,064,093 + MPMX20_02933 0.79 +1.5
3,064,101 - MPMX20_02933 0.79 -1.0
3,064,103 + MPMX20_02933 0.79 +2.2
3,064,147 + MPMX20_02933 0.83 +0.5
3,064,155 - MPMX20_02933 0.83 +0.9
3,064,203 - MPMX20_02933 0.87 -0.6
3,064,240 + MPMX20_02933 0.90 +0.8
3,064,240 + MPMX20_02933 0.90 -1.6
3,064,248 - +1.1
3,064,337 - -1.0
3,064,395 + +0.6
3,064,403 - -1.1
3,064,403 - +0.2
3,064,428 + -0.1
3,064,458 - MPMX20_02934 0.20 -0.2
3,064,555 + MPMX20_02934 0.51 -1.4
3,064,598 + MPMX20_02934 0.64 -0.3
3,064,601 - MPMX20_02934 0.65 +0.8
3,064,601 - MPMX20_02934 0.65 -1.1
3,064,606 - MPMX20_02934 0.67 -0.1
3,064,640 - MPMX20_02934 0.78 -2.2
3,064,673 - MPMX20_02934 0.88 -0.1
3,064,687 + -0.8
3,064,687 + +0.7
3,064,689 + +0.5
3,064,697 - -2.1
3,064,699 + -1.6
3,064,712 - +0.3
3,064,715 + +0.1
3,064,744 - -1.3
3,064,927 - +0.3
3,064,930 - -1.0
3,064,939 + -1.0
3,064,941 + -0.7
3,064,941 + +0.9
3,064,949 - -0.7
3,064,998 - +1.0
3,065,079 + +0.5
3,065,103 - -0.7
3,065,108 - MPMX20_02935 0.10 -0.1
3,065,119 + MPMX20_02935 0.11 +0.2
3,065,119 + MPMX20_02935 0.11 +0.1
3,065,127 - MPMX20_02935 0.11 -0.1
3,065,141 - MPMX20_02935 0.12 -0.2
3,065,142 + MPMX20_02935 0.12 +0.0
3,065,259 - MPMX20_02935 0.19 -0.7
3,065,314 - MPMX20_02935 0.22 -0.0
3,065,329 + MPMX20_02935 0.23 -1.1
3,065,337 - MPMX20_02935 0.24 -0.6
3,065,383 + MPMX20_02935 0.27 -0.6
3,065,414 + MPMX20_02935 0.28 +0.2
3,065,420 - MPMX20_02935 0.29 +1.2
3,065,421 - MPMX20_02935 0.29 -0.3
3,065,440 + MPMX20_02935 0.30 -0.8
3,065,473 + MPMX20_02935 0.32 +0.3
3,065,473 + MPMX20_02935 0.32 -2.6
3,065,481 - MPMX20_02935 0.32 -0.5
3,065,602 + MPMX20_02935 0.40 +1.4
3,065,602 + MPMX20_02935 0.40 +0.6
3,065,610 - MPMX20_02935 0.40 -0.7
3,065,610 - MPMX20_02935 0.40 -0.9
3,065,774 + MPMX20_02935 0.50 -1.3
3,065,782 - MPMX20_02935 0.50 +0.4
3,065,782 - MPMX20_02935 0.50 -0.7
3,065,782 - MPMX20_02935 0.50 +0.2
3,065,782 - MPMX20_02935 0.50 +0.6
3,065,822 + MPMX20_02935 0.53 -1.0
3,065,845 + MPMX20_02935 0.54 +1.1
3,065,882 + MPMX20_02935 0.56 -1.5
3,065,882 + MPMX20_02935 0.56 -0.8
3,065,988 + MPMX20_02935 0.63 -1.1
3,065,996 - MPMX20_02935 0.63 +0.6
3,066,068 - MPMX20_02935 0.67 -1.6
3,066,117 - MPMX20_02935 0.70 -1.3
3,066,201 - MPMX20_02935 0.75 +0.3
3,066,220 + MPMX20_02935 0.76 -1.1
3,066,249 + MPMX20_02935 0.78 -2.7
3,066,249 - MPMX20_02935 0.78 -0.4
3,066,259 - MPMX20_02935 0.79 -1.0
3,066,355 + MPMX20_02935 0.84 -0.2
3,066,424 + MPMX20_02935 0.89 +2.2
3,066,432 - MPMX20_02935 0.89 -0.7
3,066,432 - MPMX20_02935 0.89 -0.3
3,066,432 - MPMX20_02935 0.89 +0.4
3,066,432 - MPMX20_02935 0.89 -0.7
3,066,432 - MPMX20_02935 0.89 -2.7
3,066,432 - MPMX20_02935 0.89 -1.6
3,066,498 + -2.0
3,066,498 + +1.2
3,066,498 + -0.5
3,066,498 + -0.2
3,066,515 - -0.3
3,066,524 + +0.4
3,066,570 + -0.0
3,066,606 + +0.9
3,066,650 + -1.8
3,066,686 - -0.2
3,066,769 + MPMX20_02936 0.16 -0.5
3,066,772 - MPMX20_02936 0.16 -3.1
3,066,787 - MPMX20_02936 0.18 -0.4
3,066,804 - MPMX20_02936 0.20 -0.6
3,066,854 + MPMX20_02936 0.25 -0.9
3,066,854 + MPMX20_02936 0.25 +1.9
3,066,857 - MPMX20_02936 0.25 -2.4
3,066,868 + MPMX20_02936 0.26 -0.1
3,066,936 - MPMX20_02936 0.33 -1.0
3,066,951 - MPMX20_02936 0.34 -0.3
3,066,964 + MPMX20_02936 0.36 -0.2
3,067,019 + MPMX20_02936 0.41 -0.4
3,067,086 - MPMX20_02936 0.48 -1.1
3,067,108 - MPMX20_02936 0.50 +0.5
3,067,108 - MPMX20_02936 0.50 +0.5
3,067,110 + MPMX20_02936 0.50 +0.1
3,067,156 - MPMX20_02936 0.55 -1.4
3,067,397 + MPMX20_02936 0.79 -0.6
3,067,441 + MPMX20_02936 0.83 -1.0
3,067,590 + -1.6
3,067,590 + +0.1

Or see this region's nucleotide sequence