Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01394 and MPMX20_01395 are separated by 91 nucleotides MPMX20_01395 and MPMX20_01396 are separated by 224 nucleotides
MPMX20_01394: MPMX20_01394 - 6-phosphogluconolactonase, at 1,455,821 to 1,456,816
_01394
MPMX20_01395: MPMX20_01395 - Putative acyl-CoA thioester hydrolase YbhC, at 1,456,908 to 1,458,191
_01395
MPMX20_01396: MPMX20_01396 - Imidazolonepropionase, at 1,458,416 to 1,459,639
_01396
Position (kb)
1456
1457
1458
1459 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1455.912 kb on - strand at 1455.912 kb on - strand at 1455.912 kb on - strand at 1455.934 kb on - strand, within MPMX20_01394 at 1455.937 kb on + strand, within MPMX20_01394 at 1455.963 kb on - strand, within MPMX20_01394 at 1456.003 kb on + strand, within MPMX20_01394 at 1456.003 kb on + strand, within MPMX20_01394 at 1456.011 kb on - strand, within MPMX20_01394 at 1456.036 kb on + strand, within MPMX20_01394 at 1456.036 kb on + strand, within MPMX20_01394 at 1456.036 kb on + strand, within MPMX20_01394 at 1456.036 kb on + strand, within MPMX20_01394 at 1456.036 kb on + strand, within MPMX20_01394 at 1456.044 kb on - strand, within MPMX20_01394 at 1456.044 kb on - strand, within MPMX20_01394 at 1456.044 kb on - strand, within MPMX20_01394 at 1456.044 kb on - strand, within MPMX20_01394 at 1456.044 kb on - strand, within MPMX20_01394 at 1456.052 kb on - strand, within MPMX20_01394 at 1456.068 kb on + strand, within MPMX20_01394 at 1456.076 kb on - strand, within MPMX20_01394 at 1456.076 kb on - strand, within MPMX20_01394 at 1456.080 kb on + strand, within MPMX20_01394 at 1456.184 kb on - strand, within MPMX20_01394 at 1456.195 kb on + strand, within MPMX20_01394 at 1456.203 kb on - strand, within MPMX20_01394 at 1456.203 kb on - strand, within MPMX20_01394 at 1456.231 kb on + strand, within MPMX20_01394 at 1456.233 kb on + strand, within MPMX20_01394 at 1456.233 kb on + strand, within MPMX20_01394 at 1456.233 kb on + strand, within MPMX20_01394 at 1456.234 kb on + strand, within MPMX20_01394 at 1456.278 kb on + strand, within MPMX20_01394 at 1456.328 kb on - strand, within MPMX20_01394 at 1456.349 kb on + strand, within MPMX20_01394 at 1456.357 kb on - strand, within MPMX20_01394 at 1456.389 kb on + strand, within MPMX20_01394 at 1456.403 kb on + strand, within MPMX20_01394 at 1456.421 kb on - strand, within MPMX20_01394 at 1456.453 kb on + strand, within MPMX20_01394 at 1456.461 kb on - strand, within MPMX20_01394 at 1456.530 kb on + strand, within MPMX20_01394 at 1456.539 kb on + strand, within MPMX20_01394 at 1456.547 kb on + strand, within MPMX20_01394 at 1456.547 kb on - strand, within MPMX20_01394 at 1456.566 kb on + strand, within MPMX20_01394 at 1456.566 kb on + strand, within MPMX20_01394 at 1456.574 kb on - strand, within MPMX20_01394 at 1456.626 kb on + strand, within MPMX20_01394 at 1456.773 kb on - strand at 1456.933 kb on + strand at 1456.933 kb on + strand at 1456.936 kb on - strand at 1456.943 kb on + strand at 1456.969 kb on + strand at 1456.969 kb on + strand at 1456.977 kb on - strand at 1456.977 kb on - strand at 1456.983 kb on - strand at 1457.055 kb on - strand, within MPMX20_01395 at 1457.068 kb on + strand, within MPMX20_01395 at 1457.076 kb on - strand, within MPMX20_01395 at 1457.083 kb on - strand, within MPMX20_01395 at 1457.093 kb on - strand, within MPMX20_01395 at 1457.093 kb on - strand, within MPMX20_01395 at 1457.142 kb on + strand, within MPMX20_01395 at 1457.150 kb on - strand, within MPMX20_01395 at 1457.168 kb on - strand, within MPMX20_01395 at 1457.168 kb on - strand, within MPMX20_01395 at 1457.189 kb on + strand, within MPMX20_01395 at 1457.199 kb on + strand, within MPMX20_01395 at 1457.226 kb on - strand, within MPMX20_01395 at 1457.226 kb on - strand, within MPMX20_01395 at 1457.227 kb on + strand, within MPMX20_01395 at 1457.261 kb on - strand, within MPMX20_01395 at 1457.261 kb on - strand, within MPMX20_01395 at 1457.261 kb on - strand, within MPMX20_01395 at 1457.261 kb on - strand, within MPMX20_01395 at 1457.336 kb on + strand, within MPMX20_01395 at 1457.372 kb on + strand, within MPMX20_01395 at 1457.377 kb on - strand, within MPMX20_01395 at 1457.387 kb on - strand, within MPMX20_01395 at 1457.403 kb on + strand, within MPMX20_01395 at 1457.493 kb on - strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.495 kb on + strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.503 kb on - strand, within MPMX20_01395 at 1457.508 kb on + strand, within MPMX20_01395 at 1457.511 kb on - strand, within MPMX20_01395 at 1457.519 kb on + strand, within MPMX20_01395 at 1457.524 kb on + strand, within MPMX20_01395 at 1457.612 kb on - strand, within MPMX20_01395 at 1457.612 kb on - strand, within MPMX20_01395 at 1457.640 kb on - strand, within MPMX20_01395 at 1457.676 kb on + strand, within MPMX20_01395 at 1457.768 kb on + strand, within MPMX20_01395 at 1457.781 kb on - strand, within MPMX20_01395 at 1457.781 kb on - strand, within MPMX20_01395 at 1457.791 kb on - strand, within MPMX20_01395 at 1457.791 kb on - strand, within MPMX20_01395 at 1457.845 kb on + strand, within MPMX20_01395 at 1457.850 kb on + strand, within MPMX20_01395 at 1457.858 kb on - strand, within MPMX20_01395 at 1457.913 kb on + strand, within MPMX20_01395 at 1457.922 kb on + strand, within MPMX20_01395 at 1457.993 kb on - strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1457.995 kb on + strand, within MPMX20_01395 at 1458.001 kb on + strand, within MPMX20_01395 at 1458.003 kb on - strand, within MPMX20_01395 at 1458.003 kb on - strand, within MPMX20_01395 at 1458.023 kb on - strand, within MPMX20_01395 at 1458.081 kb on - strand at 1458.100 kb on - strand at 1458.116 kb on + strand at 1458.124 kb on - strand at 1458.124 kb on - strand at 1458.143 kb on + strand at 1458.150 kb on + strand at 1458.191 kb on + strand at 1458.192 kb on + strand at 1458.198 kb on + strand at 1458.198 kb on + strand at 1458.198 kb on + strand at 1458.199 kb on + strand at 1458.206 kb on - strand at 1458.206 kb on - strand at 1458.206 kb on - strand at 1458.289 kb on - strand at 1458.348 kb on - strand at 1458.362 kb on + strand at 1458.422 kb on - strand at 1458.446 kb on - strand at 1458.516 kb on + strand at 1458.516 kb on + strand at 1458.524 kb on - strand at 1458.524 kb on - strand at 1458.588 kb on + strand, within MPMX20_01396 at 1458.593 kb on + strand, within MPMX20_01396 at 1458.603 kb on + strand, within MPMX20_01396 at 1458.615 kb on + strand, within MPMX20_01396 at 1458.647 kb on - strand, within MPMX20_01396 at 1458.680 kb on - strand, within MPMX20_01396 at 1458.680 kb on - strand, within MPMX20_01396 at 1458.760 kb on - strand, within MPMX20_01396 at 1458.788 kb on + strand, within MPMX20_01396 at 1458.796 kb on - strand, within MPMX20_01396 at 1458.824 kb on - strand, within MPMX20_01396 at 1458.920 kb on + strand, within MPMX20_01396 at 1458.928 kb on - strand, within MPMX20_01396 at 1458.930 kb on + strand, within MPMX20_01396 at 1458.938 kb on - strand, within MPMX20_01396 at 1458.999 kb on + strand, within MPMX20_01396 at 1459.002 kb on - strand, within MPMX20_01396 at 1459.002 kb on - strand, within MPMX20_01396 at 1459.012 kb on + strand, within MPMX20_01396 at 1459.012 kb on + strand, within MPMX20_01396 at 1459.063 kb on - strand, within MPMX20_01396 at 1459.078 kb on - strand, within MPMX20_01396 at 1459.121 kb on + strand, within MPMX20_01396 at 1459.129 kb on - strand, within MPMX20_01396 at 1459.186 kb on - strand, within MPMX20_01396
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 1,455,912 - -1.2 1,455,912 - +1.3 1,455,912 - -0.9 1,455,934 - MPMX20_01394 0.11 -1.3 1,455,937 + MPMX20_01394 0.12 +1.7 1,455,963 - MPMX20_01394 0.14 -0.9 1,456,003 + MPMX20_01394 0.18 -0.0 1,456,003 + MPMX20_01394 0.18 +0.4 1,456,011 - MPMX20_01394 0.19 +1.9 1,456,036 + MPMX20_01394 0.22 -0.8 1,456,036 + MPMX20_01394 0.22 -1.6 1,456,036 + MPMX20_01394 0.22 +1.7 1,456,036 + MPMX20_01394 0.22 +0.0 1,456,036 + MPMX20_01394 0.22 +0.7 1,456,044 - MPMX20_01394 0.22 +1.2 1,456,044 - MPMX20_01394 0.22 +0.2 1,456,044 - MPMX20_01394 0.22 +2.7 1,456,044 - MPMX20_01394 0.22 -0.1 1,456,044 - MPMX20_01394 0.22 +0.5 1,456,052 - MPMX20_01394 0.23 -0.3 1,456,068 + MPMX20_01394 0.25 -0.3 1,456,076 - MPMX20_01394 0.26 -0.8 1,456,076 - MPMX20_01394 0.26 +1.1 1,456,080 + MPMX20_01394 0.26 +0.9 1,456,184 - MPMX20_01394 0.36 -1.1 1,456,195 + MPMX20_01394 0.38 -0.3 1,456,203 - MPMX20_01394 0.38 -0.5 1,456,203 - MPMX20_01394 0.38 -0.5 1,456,231 + MPMX20_01394 0.41 -0.7 1,456,233 + MPMX20_01394 0.41 -0.8 1,456,233 + MPMX20_01394 0.41 -0.1 1,456,233 + MPMX20_01394 0.41 +0.4 1,456,234 + MPMX20_01394 0.41 -0.1 1,456,278 + MPMX20_01394 0.46 +0.2 1,456,328 - MPMX20_01394 0.51 -1.5 1,456,349 + MPMX20_01394 0.53 -1.7 1,456,357 - MPMX20_01394 0.54 -0.4 1,456,389 + MPMX20_01394 0.57 +0.5 1,456,403 + MPMX20_01394 0.58 +1.5 1,456,421 - MPMX20_01394 0.60 -0.6 1,456,453 + MPMX20_01394 0.63 +2.4 1,456,461 - MPMX20_01394 0.64 -0.1 1,456,530 + MPMX20_01394 0.71 -1.6 1,456,539 + MPMX20_01394 0.72 -1.1 1,456,547 + MPMX20_01394 0.73 +0.2 1,456,547 - MPMX20_01394 0.73 -1.1 1,456,566 + MPMX20_01394 0.75 -1.9 1,456,566 + MPMX20_01394 0.75 -1.9 1,456,574 - MPMX20_01394 0.76 -0.8 1,456,626 + MPMX20_01394 0.81 +0.1 1,456,773 - -0.3 1,456,933 + -0.8 1,456,933 + +0.4 1,456,936 - -0.7 1,456,943 + -0.6 1,456,969 + -2.4 1,456,969 + -1.4 1,456,977 - +0.9 1,456,977 - -0.5 1,456,983 - -0.5 1,457,055 - MPMX20_01395 0.11 -0.7 1,457,068 + MPMX20_01395 0.12 +0.7 1,457,076 - MPMX20_01395 0.13 -0.5 1,457,083 - MPMX20_01395 0.14 +0.1 1,457,093 - MPMX20_01395 0.14 +1.1 1,457,093 - MPMX20_01395 0.14 -1.7 1,457,142 + MPMX20_01395 0.18 +1.0 1,457,150 - MPMX20_01395 0.19 +0.4 1,457,168 - MPMX20_01395 0.20 +1.8 1,457,168 - MPMX20_01395 0.20 -0.8 1,457,189 + MPMX20_01395 0.22 -0.1 1,457,199 + MPMX20_01395 0.23 -0.5 1,457,226 - MPMX20_01395 0.25 -1.0 1,457,226 - MPMX20_01395 0.25 -2.2 1,457,227 + MPMX20_01395 0.25 -1.1 1,457,261 - MPMX20_01395 0.27 -0.7 1,457,261 - MPMX20_01395 0.27 +0.1 1,457,261 - MPMX20_01395 0.27 -0.0 1,457,261 - MPMX20_01395 0.27 +0.7 1,457,336 + MPMX20_01395 0.33 +0.2 1,457,372 + MPMX20_01395 0.36 -0.5 1,457,377 - MPMX20_01395 0.37 -1.3 1,457,387 - MPMX20_01395 0.37 -1.1 1,457,403 + MPMX20_01395 0.39 -1.2 1,457,493 - MPMX20_01395 0.46 -0.1 1,457,495 + MPMX20_01395 0.46 +0.4 1,457,495 + MPMX20_01395 0.46 -1.7 1,457,495 + MPMX20_01395 0.46 -0.2 1,457,495 + MPMX20_01395 0.46 -0.6 1,457,503 - MPMX20_01395 0.46 +1.9 1,457,503 - MPMX20_01395 0.46 -1.3 1,457,503 - MPMX20_01395 0.46 -0.6 1,457,503 - MPMX20_01395 0.46 +0.2 1,457,508 + MPMX20_01395 0.47 -0.3 1,457,511 - MPMX20_01395 0.47 -0.3 1,457,519 + MPMX20_01395 0.48 -1.9 1,457,524 + MPMX20_01395 0.48 -1.0 1,457,612 - MPMX20_01395 0.55 +0.3 1,457,612 - MPMX20_01395 0.55 +0.8 1,457,640 - MPMX20_01395 0.57 -0.1 1,457,676 + MPMX20_01395 0.60 -1.8 1,457,768 + MPMX20_01395 0.67 -2.9 1,457,781 - MPMX20_01395 0.68 +0.0 1,457,781 - MPMX20_01395 0.68 -2.1 1,457,791 - MPMX20_01395 0.69 -1.6 1,457,791 - MPMX20_01395 0.69 -1.6 1,457,845 + MPMX20_01395 0.73 -0.8 1,457,850 + MPMX20_01395 0.73 -2.3 1,457,858 - MPMX20_01395 0.74 -1.2 1,457,913 + MPMX20_01395 0.78 +1.0 1,457,922 + MPMX20_01395 0.79 -0.2 1,457,993 - MPMX20_01395 0.85 -0.3 1,457,995 + MPMX20_01395 0.85 -2.9 1,457,995 + MPMX20_01395 0.85 -3.1 1,457,995 + MPMX20_01395 0.85 -2.1 1,458,001 + MPMX20_01395 0.85 -2.3 1,458,003 - MPMX20_01395 0.85 -1.8 1,458,003 - MPMX20_01395 0.85 -0.1 1,458,023 - MPMX20_01395 0.87 -0.0 1,458,081 - +1.7 1,458,100 - +0.0 1,458,116 + -0.5 1,458,124 - -0.0 1,458,124 - -0.1 1,458,143 + -0.2 1,458,150 + -2.1 1,458,191 + -0.6 1,458,192 + -0.1 1,458,198 + -1.7 1,458,198 + -1.9 1,458,198 + -2.2 1,458,199 + -0.7 1,458,206 - -2.4 1,458,206 - +0.4 1,458,206 - +0.8 1,458,289 - -0.9 1,458,348 - +1.0 1,458,362 + -0.5 1,458,422 - -1.9 1,458,446 - -2.7 1,458,516 + -3.5 1,458,516 + -1.6 1,458,524 - -2.6 1,458,524 - -3.0 1,458,588 + MPMX20_01396 0.14 -0.3 1,458,593 + MPMX20_01396 0.14 -1.2 1,458,603 + MPMX20_01396 0.15 -0.3 1,458,615 + MPMX20_01396 0.16 -1.6 1,458,647 - MPMX20_01396 0.19 -2.6 1,458,680 - MPMX20_01396 0.22 -1.9 1,458,680 - MPMX20_01396 0.22 -0.5 1,458,760 - MPMX20_01396 0.28 -1.2 1,458,788 + MPMX20_01396 0.30 -2.0 1,458,796 - MPMX20_01396 0.31 -0.3 1,458,824 - MPMX20_01396 0.33 -1.4 1,458,920 + MPMX20_01396 0.41 -2.5 1,458,928 - MPMX20_01396 0.42 -0.3 1,458,930 + MPMX20_01396 0.42 -2.5 1,458,938 - MPMX20_01396 0.43 -0.9 1,458,999 + MPMX20_01396 0.48 -0.3 1,459,002 - MPMX20_01396 0.48 -4.0 1,459,002 - MPMX20_01396 0.48 -1.0 1,459,012 + MPMX20_01396 0.49 -1.6 1,459,012 + MPMX20_01396 0.49 -1.5 1,459,063 - MPMX20_01396 0.53 -1.1 1,459,078 - MPMX20_01396 0.54 -2.2 1,459,121 + MPMX20_01396 0.58 -1.9 1,459,129 - MPMX20_01396 0.58 -1.2 1,459,186 - MPMX20_01396 0.63 -3.3
Or see this region's nucleotide sequence