Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04505

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04503 and MPMX20_04504 are separated by 27 nucleotidesMPMX20_04504 and MPMX20_04505 are separated by 118 nucleotidesMPMX20_04505 and MPMX20_04506 are separated by 97 nucleotidesMPMX20_04506 and MPMX20_04507 are separated by 53 nucleotidesMPMX20_04507 and MPMX20_04508 are separated by 58 nucleotidesMPMX20_04508 and MPMX20_04509 are separated by 67 nucleotides MPMX20_04503: MPMX20_04503 - Competence protein ComM, at 4,711,560 to 4,713,080 _04503 MPMX20_04504: MPMX20_04504 - hypothetical protein, at 4,713,108 to 4,713,446 _04504 MPMX20_04505: MPMX20_04505 - HTH-type transcriptional regulator HdfR, at 4,713,565 to 4,714,386 _04505 MPMX20_04506: MPMX20_04506 - tRNA-Trp, at 4,714,484 to 4,714,559 _04506 MPMX20_04507: MPMX20_04507 - tRNA-Asp, at 4,714,613 to 4,714,689 _04507 MPMX20_04508: MPMX20_04508 - 5S ribosomal RNA, at 4,714,748 to 4,714,858 _04508 MPMX20_04509: MPMX20_04509 - 23S ribosomal RNA, at 4,714,926 to 4,717,829 _04509 Position (kb) 4713 4714 4715Strain fitness (log2 ratio) -3 -2 -1 0 1at 4712.578 kb on - strand, within MPMX20_04503at 4712.593 kb on + strand, within MPMX20_04503at 4712.593 kb on + strand, within MPMX20_04503at 4712.594 kb on + strand, within MPMX20_04503at 4712.638 kb on + strand, within MPMX20_04503at 4712.638 kb on + strand, within MPMX20_04503at 4712.648 kb on - strand, within MPMX20_04503at 4712.659 kb on + strand, within MPMX20_04503at 4712.659 kb on + strand, within MPMX20_04503at 4712.714 kb on + strand, within MPMX20_04503at 4712.725 kb on + strand, within MPMX20_04503at 4712.733 kb on - strand, within MPMX20_04503at 4712.739 kb on + strand, within MPMX20_04503at 4712.786 kb on + strand, within MPMX20_04503at 4712.794 kb on - strand, within MPMX20_04503at 4712.810 kb on + strand, within MPMX20_04503at 4712.896 kb on + strand, within MPMX20_04503at 4712.925 kb on - strand, within MPMX20_04503at 4712.925 kb on - strand, within MPMX20_04503at 4712.925 kb on - strand, within MPMX20_04503at 4713.131 kb on + strandat 4713.132 kb on - strandat 4713.132 kb on - strandat 4713.139 kb on + strandat 4713.139 kb on + strandat 4713.139 kb on - strandat 4713.195 kb on - strand, within MPMX20_04504at 4713.195 kb on - strand, within MPMX20_04504at 4713.226 kb on + strand, within MPMX20_04504at 4713.226 kb on + strand, within MPMX20_04504at 4713.266 kb on - strand, within MPMX20_04504at 4713.298 kb on + strand, within MPMX20_04504at 4713.298 kb on + strand, within MPMX20_04504at 4713.306 kb on - strand, within MPMX20_04504at 4713.331 kb on + strand, within MPMX20_04504at 4713.428 kb on + strandat 4713.445 kb on + strandat 4713.453 kb on - strandat 4713.453 kb on - strandat 4713.462 kb on - strandat 4713.491 kb on + strandat 4713.497 kb on - strandat 4713.512 kb on + strandat 4713.635 kb on + strandat 4713.643 kb on - strandat 4713.643 kb on - strandat 4713.725 kb on + strand, within MPMX20_04505at 4713.733 kb on - strand, within MPMX20_04505at 4713.733 kb on - strand, within MPMX20_04505at 4713.759 kb on + strand, within MPMX20_04505at 4713.790 kb on - strand, within MPMX20_04505at 4713.800 kb on + strand, within MPMX20_04505at 4713.818 kb on + strand, within MPMX20_04505at 4713.824 kb on - strand, within MPMX20_04505at 4713.826 kb on - strand, within MPMX20_04505at 4713.826 kb on - strand, within MPMX20_04505at 4713.826 kb on - strand, within MPMX20_04505at 4713.847 kb on - strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.894 kb on + strand, within MPMX20_04505at 4713.902 kb on - strand, within MPMX20_04505at 4713.902 kb on - strand, within MPMX20_04505at 4713.902 kb on - strand, within MPMX20_04505at 4713.902 kb on - strand, within MPMX20_04505at 4713.902 kb on - strand, within MPMX20_04505at 4713.998 kb on - strand, within MPMX20_04505at 4714.044 kb on + strand, within MPMX20_04505at 4714.044 kb on + strand, within MPMX20_04505at 4714.105 kb on + strand, within MPMX20_04505at 4714.184 kb on + strand, within MPMX20_04505at 4714.207 kb on - strand, within MPMX20_04505at 4714.207 kb on - strand, within MPMX20_04505at 4714.248 kb on - strand, within MPMX20_04505at 4714.279 kb on - strand, within MPMX20_04505at 4714.297 kb on - strand, within MPMX20_04505at 4714.308 kb on + strandat 4714.316 kb on - strandat 4714.417 kb on + strandat 4714.425 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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4,712,578 - MPMX20_04503 0.67 +1.0
4,712,593 + MPMX20_04503 0.68 -2.7
4,712,593 + MPMX20_04503 0.68 +0.4
4,712,594 + MPMX20_04503 0.68 -0.5
4,712,638 + MPMX20_04503 0.71 +0.3
4,712,638 + MPMX20_04503 0.71 +0.1
4,712,648 - MPMX20_04503 0.72 +0.2
4,712,659 + MPMX20_04503 0.72 -0.2
4,712,659 + MPMX20_04503 0.72 +0.7
4,712,714 + MPMX20_04503 0.76 -0.1
4,712,725 + MPMX20_04503 0.77 +0.1
4,712,733 - MPMX20_04503 0.77 +1.1
4,712,739 + MPMX20_04503 0.78 -0.7
4,712,786 + MPMX20_04503 0.81 +1.6
4,712,794 - MPMX20_04503 0.81 -0.5
4,712,810 + MPMX20_04503 0.82 -0.3
4,712,896 + MPMX20_04503 0.88 -0.5
4,712,925 - MPMX20_04503 0.90 -0.5
4,712,925 - MPMX20_04503 0.90 -0.7
4,712,925 - MPMX20_04503 0.90 +0.3
4,713,131 + -1.9
4,713,132 - -0.9
4,713,132 - +1.3
4,713,139 + -0.2
4,713,139 + -0.9
4,713,139 - +1.6
4,713,195 - MPMX20_04504 0.26 -0.7
4,713,195 - MPMX20_04504 0.26 -2.9
4,713,226 + MPMX20_04504 0.35 -0.2
4,713,226 + MPMX20_04504 0.35 -3.3
4,713,266 - MPMX20_04504 0.47 -3.0
4,713,298 + MPMX20_04504 0.56 -1.8
4,713,298 + MPMX20_04504 0.56 -1.0
4,713,306 - MPMX20_04504 0.58 -0.8
4,713,331 + MPMX20_04504 0.66 -0.7
4,713,428 + -0.2
4,713,445 + -2.4
4,713,453 - -2.0
4,713,453 - -0.8
4,713,462 - -0.7
4,713,491 + -2.2
4,713,497 - +0.6
4,713,512 + -2.0
4,713,635 + +0.3
4,713,643 - -0.8
4,713,643 - -0.1
4,713,725 + MPMX20_04505 0.19 -2.3
4,713,733 - MPMX20_04505 0.20 -0.3
4,713,733 - MPMX20_04505 0.20 -2.7
4,713,759 + MPMX20_04505 0.24 -1.2
4,713,790 - MPMX20_04505 0.27 -1.2
4,713,800 + MPMX20_04505 0.29 -2.2
4,713,818 + MPMX20_04505 0.31 +0.0
4,713,824 - MPMX20_04505 0.32 -0.7
4,713,826 - MPMX20_04505 0.32 -1.2
4,713,826 - MPMX20_04505 0.32 -1.1
4,713,826 - MPMX20_04505 0.32 -1.8
4,713,847 - MPMX20_04505 0.34 -1.5
4,713,894 + MPMX20_04505 0.40 -0.7
4,713,894 + MPMX20_04505 0.40 -1.0
4,713,894 + MPMX20_04505 0.40 -2.4
4,713,894 + MPMX20_04505 0.40 -1.7
4,713,894 + MPMX20_04505 0.40 -1.3
4,713,894 + MPMX20_04505 0.40 -1.6
4,713,894 + MPMX20_04505 0.40 -0.5
4,713,894 + MPMX20_04505 0.40 -2.0
4,713,902 - MPMX20_04505 0.41 -1.4
4,713,902 - MPMX20_04505 0.41 -0.1
4,713,902 - MPMX20_04505 0.41 -1.1
4,713,902 - MPMX20_04505 0.41 +0.0
4,713,902 - MPMX20_04505 0.41 -2.9
4,713,998 - MPMX20_04505 0.53 -3.5
4,714,044 + MPMX20_04505 0.58 -1.0
4,714,044 + MPMX20_04505 0.58 -1.2
4,714,105 + MPMX20_04505 0.66 -0.3
4,714,184 + MPMX20_04505 0.75 -1.8
4,714,207 - MPMX20_04505 0.78 +0.2
4,714,207 - MPMX20_04505 0.78 -0.5
4,714,248 - MPMX20_04505 0.83 -2.2
4,714,279 - MPMX20_04505 0.87 -2.5
4,714,297 - MPMX20_04505 0.89 -1.5
4,714,308 + -3.2
4,714,316 - -1.6
4,714,417 + +0.1
4,714,425 - -0.2

Or see this region's nucleotide sequence