Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04120 and MPMX20_04121 are separated by 123 nucleotides MPMX20_04121 and MPMX20_04122 are separated by 83 nucleotides MPMX20_04122 and MPMX20_04123 are separated by 80 nucleotides
MPMX20_04120: MPMX20_04120 - Valine--tRNA ligase, at 4,312,968 to 4,315,823
_04120
MPMX20_04121: MPMX20_04121 - hypothetical protein, at 4,315,947 to 4,316,450
_04121
MPMX20_04122: MPMX20_04122 - Aldehyde reductase Ahr, at 4,316,534 to 4,317,553
_04122
MPMX20_04123: MPMX20_04123 - Dihydroxyacetone kinase, at 4,317,634 to 4,319,280
_04123
Position (kb)
4316
4317
4318 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4315.910 kb on - strand at 4315.945 kb on - strand at 4315.992 kb on + strand at 4315.992 kb on + strand at 4315.997 kb on + strand at 4316.000 kb on - strand, within MPMX20_04121 at 4316.005 kb on - strand, within MPMX20_04121 at 4316.040 kb on + strand, within MPMX20_04121 at 4316.040 kb on + strand, within MPMX20_04121 at 4316.048 kb on - strand, within MPMX20_04121 at 4316.048 kb on - strand, within MPMX20_04121 at 4316.048 kb on - strand, within MPMX20_04121 at 4316.049 kb on - strand, within MPMX20_04121 at 4316.064 kb on + strand, within MPMX20_04121 at 4316.072 kb on - strand, within MPMX20_04121 at 4316.073 kb on - strand, within MPMX20_04121 at 4316.121 kb on + strand, within MPMX20_04121 at 4316.150 kb on + strand, within MPMX20_04121 at 4316.181 kb on + strand, within MPMX20_04121 at 4316.181 kb on + strand, within MPMX20_04121 at 4316.181 kb on + strand, within MPMX20_04121 at 4316.189 kb on - strand, within MPMX20_04121 at 4316.189 kb on - strand, within MPMX20_04121 at 4316.206 kb on + strand, within MPMX20_04121 at 4316.256 kb on - strand, within MPMX20_04121 at 4316.289 kb on - strand, within MPMX20_04121 at 4316.347 kb on - strand, within MPMX20_04121 at 4316.350 kb on + strand, within MPMX20_04121 at 4316.350 kb on + strand, within MPMX20_04121 at 4316.374 kb on + strand, within MPMX20_04121 at 4316.399 kb on + strand, within MPMX20_04121 at 4316.399 kb on + strand, within MPMX20_04121 at 4316.399 kb on + strand, within MPMX20_04121 at 4316.407 kb on - strand at 4316.412 kb on - strand at 4316.435 kb on + strand at 4316.435 kb on + strand at 4316.465 kb on - strand at 4316.465 kb on - strand at 4316.467 kb on + strand at 4316.494 kb on + strand at 4316.494 kb on + strand at 4316.494 kb on + strand at 4316.502 kb on - strand at 4316.508 kb on + strand at 4316.569 kb on - strand at 4316.569 kb on - strand at 4316.574 kb on - strand at 4316.616 kb on - strand at 4316.666 kb on - strand, within MPMX20_04122 at 4316.684 kb on + strand, within MPMX20_04122 at 4316.749 kb on + strand, within MPMX20_04122 at 4316.764 kb on + strand, within MPMX20_04122 at 4316.764 kb on + strand, within MPMX20_04122 at 4316.764 kb on + strand, within MPMX20_04122 at 4316.772 kb on - strand, within MPMX20_04122 at 4316.817 kb on + strand, within MPMX20_04122 at 4316.817 kb on + strand, within MPMX20_04122 at 4316.817 kb on + strand, within MPMX20_04122 at 4316.817 kb on + strand, within MPMX20_04122 at 4316.825 kb on - strand, within MPMX20_04122 at 4316.825 kb on - strand, within MPMX20_04122 at 4316.888 kb on - strand, within MPMX20_04122 at 4316.934 kb on + strand, within MPMX20_04122 at 4317.076 kb on - strand, within MPMX20_04122 at 4317.366 kb on - strand, within MPMX20_04122 at 4317.366 kb on - strand, within MPMX20_04122 at 4317.393 kb on + strand, within MPMX20_04122 at 4317.393 kb on + strand, within MPMX20_04122 at 4317.393 kb on + strand, within MPMX20_04122 at 4317.456 kb on + strand at 4317.464 kb on - strand at 4317.591 kb on + strand at 4317.603 kb on + strand at 4317.664 kb on - strand at 4317.694 kb on + strand at 4317.709 kb on - strand at 4317.709 kb on - strand at 4317.709 kb on - strand at 4317.801 kb on + strand, within MPMX20_04123 at 4317.878 kb on - strand, within MPMX20_04123 at 4317.881 kb on + strand, within MPMX20_04123 at 4317.893 kb on + strand, within MPMX20_04123 at 4317.928 kb on + strand, within MPMX20_04123 at 4317.930 kb on + strand, within MPMX20_04123 at 4318.073 kb on + strand, within MPMX20_04123 at 4318.111 kb on + strand, within MPMX20_04123 at 4318.111 kb on + strand, within MPMX20_04123 at 4318.220 kb on - strand, within MPMX20_04123 at 4318.220 kb on - strand, within MPMX20_04123 at 4318.220 kb on - strand, within MPMX20_04123 at 4318.246 kb on + strand, within MPMX20_04123 at 4318.246 kb on + strand, within MPMX20_04123 at 4318.254 kb on - strand, within MPMX20_04123 at 4318.254 kb on - strand, within MPMX20_04123 at 4318.296 kb on + strand, within MPMX20_04123 at 4318.303 kb on - strand, within MPMX20_04123 at 4318.399 kb on + strand, within MPMX20_04123 at 4318.405 kb on - strand, within MPMX20_04123 at 4318.443 kb on + strand, within MPMX20_04123 at 4318.461 kb on - strand, within MPMX20_04123 at 4318.461 kb on - strand, within MPMX20_04123 at 4318.475 kb on + strand, within MPMX20_04123 at 4318.496 kb on + strand, within MPMX20_04123 at 4318.496 kb on + strand, within MPMX20_04123
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,315,910 - -0.8 4,315,945 - -0.6 4,315,992 + +0.4 4,315,992 + -1.4 4,315,997 + +0.5 4,316,000 - MPMX20_04121 0.11 -1.4 4,316,005 - MPMX20_04121 0.12 +0.1 4,316,040 + MPMX20_04121 0.18 -0.4 4,316,040 + MPMX20_04121 0.18 +0.0 4,316,048 - MPMX20_04121 0.20 -0.4 4,316,048 - MPMX20_04121 0.20 -0.9 4,316,048 - MPMX20_04121 0.20 -0.4 4,316,049 - MPMX20_04121 0.20 -1.1 4,316,064 + MPMX20_04121 0.23 -0.9 4,316,072 - MPMX20_04121 0.25 -0.2 4,316,073 - MPMX20_04121 0.25 +0.1 4,316,121 + MPMX20_04121 0.35 -0.1 4,316,150 + MPMX20_04121 0.40 -0.6 4,316,181 + MPMX20_04121 0.46 +0.6 4,316,181 + MPMX20_04121 0.46 -0.1 4,316,181 + MPMX20_04121 0.46 -0.1 4,316,189 - MPMX20_04121 0.48 -0.2 4,316,189 - MPMX20_04121 0.48 +0.1 4,316,206 + MPMX20_04121 0.51 -1.4 4,316,256 - MPMX20_04121 0.61 -0.6 4,316,289 - MPMX20_04121 0.68 -0.1 4,316,347 - MPMX20_04121 0.79 -0.3 4,316,350 + MPMX20_04121 0.80 -1.4 4,316,350 + MPMX20_04121 0.80 +1.6 4,316,374 + MPMX20_04121 0.85 +2.2 4,316,399 + MPMX20_04121 0.90 +0.2 4,316,399 + MPMX20_04121 0.90 -0.5 4,316,399 + MPMX20_04121 0.90 -0.2 4,316,407 - +0.6 4,316,412 - -0.2 4,316,435 + +0.7 4,316,435 + +0.3 4,316,465 - +0.3 4,316,465 - -0.7 4,316,467 + -0.5 4,316,494 + -1.3 4,316,494 + +0.6 4,316,494 + -1.4 4,316,502 - -0.2 4,316,508 + -0.8 4,316,569 - -0.7 4,316,569 - -1.2 4,316,574 - -0.0 4,316,616 - +0.9 4,316,666 - MPMX20_04122 0.13 +1.3 4,316,684 + MPMX20_04122 0.15 +0.1 4,316,749 + MPMX20_04122 0.21 -0.3 4,316,764 + MPMX20_04122 0.23 +1.7 4,316,764 + MPMX20_04122 0.23 +2.2 4,316,764 + MPMX20_04122 0.23 -0.7 4,316,772 - MPMX20_04122 0.23 -0.6 4,316,817 + MPMX20_04122 0.28 +0.9 4,316,817 + MPMX20_04122 0.28 -2.4 4,316,817 + MPMX20_04122 0.28 +0.1 4,316,817 + MPMX20_04122 0.28 -0.3 4,316,825 - MPMX20_04122 0.29 -0.1 4,316,825 - MPMX20_04122 0.29 -2.1 4,316,888 - MPMX20_04122 0.35 -0.9 4,316,934 + MPMX20_04122 0.39 -1.7 4,317,076 - MPMX20_04122 0.53 -0.3 4,317,366 - MPMX20_04122 0.82 +0.2 4,317,366 - MPMX20_04122 0.82 -0.6 4,317,393 + MPMX20_04122 0.84 +0.1 4,317,393 + MPMX20_04122 0.84 +1.2 4,317,393 + MPMX20_04122 0.84 -1.8 4,317,456 + +1.1 4,317,464 - +1.3 4,317,591 + -1.6 4,317,603 + +1.1 4,317,664 - +0.2 4,317,694 + -0.2 4,317,709 - +0.1 4,317,709 - +1.3 4,317,709 - +0.5 4,317,801 + MPMX20_04123 0.10 +0.2 4,317,878 - MPMX20_04123 0.15 -0.1 4,317,881 + MPMX20_04123 0.15 -2.5 4,317,893 + MPMX20_04123 0.16 -0.3 4,317,928 + MPMX20_04123 0.18 -0.4 4,317,930 + MPMX20_04123 0.18 +0.7 4,318,073 + MPMX20_04123 0.27 +0.8 4,318,111 + MPMX20_04123 0.29 +1.1 4,318,111 + MPMX20_04123 0.29 +0.8 4,318,220 - MPMX20_04123 0.36 -1.1 4,318,220 - MPMX20_04123 0.36 -1.6 4,318,220 - MPMX20_04123 0.36 +0.8 4,318,246 + MPMX20_04123 0.37 +0.0 4,318,246 + MPMX20_04123 0.37 -0.1 4,318,254 - MPMX20_04123 0.38 +0.2 4,318,254 - MPMX20_04123 0.38 -0.1 4,318,296 + MPMX20_04123 0.40 -0.0 4,318,303 - MPMX20_04123 0.41 +0.6 4,318,399 + MPMX20_04123 0.46 -0.0 4,318,405 - MPMX20_04123 0.47 -0.5 4,318,443 + MPMX20_04123 0.49 +1.7 4,318,461 - MPMX20_04123 0.50 -0.3 4,318,461 - MPMX20_04123 0.50 -0.2 4,318,475 + MPMX20_04123 0.51 -2.2 4,318,496 + MPMX20_04123 0.52 -1.0 4,318,496 + MPMX20_04123 0.52 -0.2
Or see this region's nucleotide sequence