Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04122

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04120 and MPMX20_04121 are separated by 123 nucleotidesMPMX20_04121 and MPMX20_04122 are separated by 83 nucleotidesMPMX20_04122 and MPMX20_04123 are separated by 80 nucleotides MPMX20_04120: MPMX20_04120 - Valine--tRNA ligase, at 4,312,968 to 4,315,823 _04120 MPMX20_04121: MPMX20_04121 - hypothetical protein, at 4,315,947 to 4,316,450 _04121 MPMX20_04122: MPMX20_04122 - Aldehyde reductase Ahr, at 4,316,534 to 4,317,553 _04122 MPMX20_04123: MPMX20_04123 - Dihydroxyacetone kinase, at 4,317,634 to 4,319,280 _04123 Position (kb) 4316 4317 4318Strain fitness (log2 ratio) -2 -1 0 1 2at 4315.910 kb on - strandat 4315.945 kb on - strandat 4315.992 kb on + strandat 4315.992 kb on + strandat 4315.997 kb on + strandat 4316.000 kb on - strand, within MPMX20_04121at 4316.005 kb on - strand, within MPMX20_04121at 4316.040 kb on + strand, within MPMX20_04121at 4316.040 kb on + strand, within MPMX20_04121at 4316.048 kb on - strand, within MPMX20_04121at 4316.048 kb on - strand, within MPMX20_04121at 4316.048 kb on - strand, within MPMX20_04121at 4316.049 kb on - strand, within MPMX20_04121at 4316.064 kb on + strand, within MPMX20_04121at 4316.072 kb on - strand, within MPMX20_04121at 4316.073 kb on - strand, within MPMX20_04121at 4316.121 kb on + strand, within MPMX20_04121at 4316.150 kb on + strand, within MPMX20_04121at 4316.181 kb on + strand, within MPMX20_04121at 4316.181 kb on + strand, within MPMX20_04121at 4316.181 kb on + strand, within MPMX20_04121at 4316.189 kb on - strand, within MPMX20_04121at 4316.189 kb on - strand, within MPMX20_04121at 4316.206 kb on + strand, within MPMX20_04121at 4316.256 kb on - strand, within MPMX20_04121at 4316.289 kb on - strand, within MPMX20_04121at 4316.347 kb on - strand, within MPMX20_04121at 4316.350 kb on + strand, within MPMX20_04121at 4316.350 kb on + strand, within MPMX20_04121at 4316.374 kb on + strand, within MPMX20_04121at 4316.399 kb on + strand, within MPMX20_04121at 4316.399 kb on + strand, within MPMX20_04121at 4316.399 kb on + strand, within MPMX20_04121at 4316.407 kb on - strandat 4316.412 kb on - strandat 4316.435 kb on + strandat 4316.435 kb on + strandat 4316.465 kb on - strandat 4316.465 kb on - strandat 4316.467 kb on + strandat 4316.494 kb on + strandat 4316.494 kb on + strandat 4316.494 kb on + strandat 4316.502 kb on - strandat 4316.508 kb on + strandat 4316.569 kb on - strandat 4316.569 kb on - strandat 4316.574 kb on - strandat 4316.616 kb on - strandat 4316.666 kb on - strand, within MPMX20_04122at 4316.684 kb on + strand, within MPMX20_04122at 4316.749 kb on + strand, within MPMX20_04122at 4316.764 kb on + strand, within MPMX20_04122at 4316.764 kb on + strand, within MPMX20_04122at 4316.764 kb on + strand, within MPMX20_04122at 4316.772 kb on - strand, within MPMX20_04122at 4316.817 kb on + strand, within MPMX20_04122at 4316.817 kb on + strand, within MPMX20_04122at 4316.817 kb on + strand, within MPMX20_04122at 4316.817 kb on + strand, within MPMX20_04122at 4316.825 kb on - strand, within MPMX20_04122at 4316.825 kb on - strand, within MPMX20_04122at 4316.888 kb on - strand, within MPMX20_04122at 4316.934 kb on + strand, within MPMX20_04122at 4317.076 kb on - strand, within MPMX20_04122at 4317.366 kb on - strand, within MPMX20_04122at 4317.366 kb on - strand, within MPMX20_04122at 4317.393 kb on + strand, within MPMX20_04122at 4317.393 kb on + strand, within MPMX20_04122at 4317.393 kb on + strand, within MPMX20_04122at 4317.456 kb on + strandat 4317.464 kb on - strandat 4317.591 kb on + strandat 4317.603 kb on + strandat 4317.664 kb on - strandat 4317.694 kb on + strandat 4317.709 kb on - strandat 4317.709 kb on - strandat 4317.709 kb on - strandat 4317.801 kb on + strand, within MPMX20_04123at 4317.878 kb on - strand, within MPMX20_04123at 4317.881 kb on + strand, within MPMX20_04123at 4317.893 kb on + strand, within MPMX20_04123at 4317.928 kb on + strand, within MPMX20_04123at 4317.930 kb on + strand, within MPMX20_04123at 4318.073 kb on + strand, within MPMX20_04123at 4318.111 kb on + strand, within MPMX20_04123at 4318.111 kb on + strand, within MPMX20_04123at 4318.220 kb on - strand, within MPMX20_04123at 4318.220 kb on - strand, within MPMX20_04123at 4318.220 kb on - strand, within MPMX20_04123at 4318.246 kb on + strand, within MPMX20_04123at 4318.246 kb on + strand, within MPMX20_04123at 4318.254 kb on - strand, within MPMX20_04123at 4318.254 kb on - strand, within MPMX20_04123at 4318.296 kb on + strand, within MPMX20_04123at 4318.303 kb on - strand, within MPMX20_04123at 4318.399 kb on + strand, within MPMX20_04123at 4318.405 kb on - strand, within MPMX20_04123at 4318.443 kb on + strand, within MPMX20_04123at 4318.461 kb on - strand, within MPMX20_04123at 4318.461 kb on - strand, within MPMX20_04123at 4318.475 kb on + strand, within MPMX20_04123at 4318.496 kb on + strand, within MPMX20_04123at 4318.496 kb on + strand, within MPMX20_04123

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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4,315,910 - -0.8
4,315,945 - -0.6
4,315,992 + +0.4
4,315,992 + -1.4
4,315,997 + +0.5
4,316,000 - MPMX20_04121 0.11 -1.4
4,316,005 - MPMX20_04121 0.12 +0.1
4,316,040 + MPMX20_04121 0.18 -0.4
4,316,040 + MPMX20_04121 0.18 +0.0
4,316,048 - MPMX20_04121 0.20 -0.4
4,316,048 - MPMX20_04121 0.20 -0.9
4,316,048 - MPMX20_04121 0.20 -0.4
4,316,049 - MPMX20_04121 0.20 -1.1
4,316,064 + MPMX20_04121 0.23 -0.9
4,316,072 - MPMX20_04121 0.25 -0.2
4,316,073 - MPMX20_04121 0.25 +0.1
4,316,121 + MPMX20_04121 0.35 -0.1
4,316,150 + MPMX20_04121 0.40 -0.6
4,316,181 + MPMX20_04121 0.46 +0.6
4,316,181 + MPMX20_04121 0.46 -0.1
4,316,181 + MPMX20_04121 0.46 -0.1
4,316,189 - MPMX20_04121 0.48 -0.2
4,316,189 - MPMX20_04121 0.48 +0.1
4,316,206 + MPMX20_04121 0.51 -1.4
4,316,256 - MPMX20_04121 0.61 -0.6
4,316,289 - MPMX20_04121 0.68 -0.1
4,316,347 - MPMX20_04121 0.79 -0.3
4,316,350 + MPMX20_04121 0.80 -1.4
4,316,350 + MPMX20_04121 0.80 +1.6
4,316,374 + MPMX20_04121 0.85 +2.2
4,316,399 + MPMX20_04121 0.90 +0.2
4,316,399 + MPMX20_04121 0.90 -0.5
4,316,399 + MPMX20_04121 0.90 -0.2
4,316,407 - +0.6
4,316,412 - -0.2
4,316,435 + +0.7
4,316,435 + +0.3
4,316,465 - +0.3
4,316,465 - -0.7
4,316,467 + -0.5
4,316,494 + -1.3
4,316,494 + +0.6
4,316,494 + -1.4
4,316,502 - -0.2
4,316,508 + -0.8
4,316,569 - -0.7
4,316,569 - -1.2
4,316,574 - -0.0
4,316,616 - +0.9
4,316,666 - MPMX20_04122 0.13 +1.3
4,316,684 + MPMX20_04122 0.15 +0.1
4,316,749 + MPMX20_04122 0.21 -0.3
4,316,764 + MPMX20_04122 0.23 +1.7
4,316,764 + MPMX20_04122 0.23 +2.2
4,316,764 + MPMX20_04122 0.23 -0.7
4,316,772 - MPMX20_04122 0.23 -0.6
4,316,817 + MPMX20_04122 0.28 +0.9
4,316,817 + MPMX20_04122 0.28 -2.4
4,316,817 + MPMX20_04122 0.28 +0.1
4,316,817 + MPMX20_04122 0.28 -0.3
4,316,825 - MPMX20_04122 0.29 -0.1
4,316,825 - MPMX20_04122 0.29 -2.1
4,316,888 - MPMX20_04122 0.35 -0.9
4,316,934 + MPMX20_04122 0.39 -1.7
4,317,076 - MPMX20_04122 0.53 -0.3
4,317,366 - MPMX20_04122 0.82 +0.2
4,317,366 - MPMX20_04122 0.82 -0.6
4,317,393 + MPMX20_04122 0.84 +0.1
4,317,393 + MPMX20_04122 0.84 +1.2
4,317,393 + MPMX20_04122 0.84 -1.8
4,317,456 + +1.1
4,317,464 - +1.3
4,317,591 + -1.6
4,317,603 + +1.1
4,317,664 - +0.2
4,317,694 + -0.2
4,317,709 - +0.1
4,317,709 - +1.3
4,317,709 - +0.5
4,317,801 + MPMX20_04123 0.10 +0.2
4,317,878 - MPMX20_04123 0.15 -0.1
4,317,881 + MPMX20_04123 0.15 -2.5
4,317,893 + MPMX20_04123 0.16 -0.3
4,317,928 + MPMX20_04123 0.18 -0.4
4,317,930 + MPMX20_04123 0.18 +0.7
4,318,073 + MPMX20_04123 0.27 +0.8
4,318,111 + MPMX20_04123 0.29 +1.1
4,318,111 + MPMX20_04123 0.29 +0.8
4,318,220 - MPMX20_04123 0.36 -1.1
4,318,220 - MPMX20_04123 0.36 -1.6
4,318,220 - MPMX20_04123 0.36 +0.8
4,318,246 + MPMX20_04123 0.37 +0.0
4,318,246 + MPMX20_04123 0.37 -0.1
4,318,254 - MPMX20_04123 0.38 +0.2
4,318,254 - MPMX20_04123 0.38 -0.1
4,318,296 + MPMX20_04123 0.40 -0.0
4,318,303 - MPMX20_04123 0.41 +0.6
4,318,399 + MPMX20_04123 0.46 -0.0
4,318,405 - MPMX20_04123 0.47 -0.5
4,318,443 + MPMX20_04123 0.49 +1.7
4,318,461 - MPMX20_04123 0.50 -0.3
4,318,461 - MPMX20_04123 0.50 -0.2
4,318,475 + MPMX20_04123 0.51 -2.2
4,318,496 + MPMX20_04123 0.52 -1.0
4,318,496 + MPMX20_04123 0.52 -0.2

Or see this region's nucleotide sequence