Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_03887

Experiment: L-Arginine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_03886 and MPMX20_03887 are separated by 67 nucleotidesMPMX20_03887 and MPMX20_03888 are separated by 373 nucleotidesMPMX20_03888 and MPMX20_03889 are separated by 96 nucleotides MPMX20_03886: MPMX20_03886 - Zinc transporter ZupT, at 4,095,376 to 4,096,149 _03886 MPMX20_03887: MPMX20_03887 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 4,096,217 to 4,096,870 _03887 MPMX20_03888: MPMX20_03888 - Ubiquinone biosynthesis accessory factor UbiK, at 4,097,244 to 4,097,540 _03888 MPMX20_03889: MPMX20_03889 - Bifunctional protein HldE, at 4,097,637 to 4,099,067 _03889 Position (kb) 4096 4097Strain fitness (log2 ratio) -3 -2 -1 0 1at 4095.221 kb on - strandat 4095.221 kb on - strandat 4095.233 kb on - strandat 4095.257 kb on - strandat 4095.294 kb on + strandat 4095.377 kb on + strandat 4095.380 kb on - strandat 4095.386 kb on + strandat 4095.394 kb on - strandat 4095.430 kb on + strandat 4095.544 kb on - strand, within MPMX20_03886at 4095.544 kb on - strand, within MPMX20_03886at 4095.576 kb on - strand, within MPMX20_03886at 4095.590 kb on + strand, within MPMX20_03886at 4095.671 kb on + strand, within MPMX20_03886at 4095.679 kb on - strand, within MPMX20_03886at 4095.679 kb on - strand, within MPMX20_03886at 4095.693 kb on + strand, within MPMX20_03886at 4095.706 kb on - strand, within MPMX20_03886at 4095.708 kb on - strand, within MPMX20_03886at 4095.708 kb on - strand, within MPMX20_03886at 4095.708 kb on - strand, within MPMX20_03886at 4095.708 kb on - strand, within MPMX20_03886at 4095.717 kb on + strand, within MPMX20_03886at 4095.719 kb on + strand, within MPMX20_03886at 4095.719 kb on + strand, within MPMX20_03886at 4095.719 kb on + strand, within MPMX20_03886at 4095.719 kb on + strand, within MPMX20_03886at 4095.727 kb on - strand, within MPMX20_03886at 4095.727 kb on - strand, within MPMX20_03886at 4095.727 kb on - strand, within MPMX20_03886at 4095.727 kb on - strand, within MPMX20_03886at 4095.727 kb on - strand, within MPMX20_03886at 4095.737 kb on - strand, within MPMX20_03886at 4095.896 kb on - strand, within MPMX20_03886at 4095.939 kb on - strand, within MPMX20_03886at 4095.946 kb on + strand, within MPMX20_03886at 4095.956 kb on + strand, within MPMX20_03886at 4095.964 kb on - strand, within MPMX20_03886at 4095.978 kb on - strand, within MPMX20_03886at 4095.993 kb on - strand, within MPMX20_03886at 4096.004 kb on + strand, within MPMX20_03886at 4096.020 kb on + strand, within MPMX20_03886at 4096.032 kb on + strand, within MPMX20_03886at 4096.074 kb on + strandat 4096.108 kb on + strandat 4096.122 kb on - strandat 4096.141 kb on - strandat 4097.154 kb on - strandat 4097.170 kb on + strandat 4097.185 kb on + strandat 4097.193 kb on - strandat 4097.213 kb on + strandat 4097.291 kb on + strand, within MPMX20_03888at 4097.560 kb on - strandat 4097.573 kb on + strandat 4097.581 kb on - strandat 4097.581 kb on - strandat 4097.588 kb on - strandat 4097.656 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Arginine (N)
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4,095,221 - +0.6
4,095,221 - +0.4
4,095,233 - +0.1
4,095,257 - +0.7
4,095,294 + -0.4
4,095,377 + +1.0
4,095,380 - +1.0
4,095,386 + -1.5
4,095,394 - -0.3
4,095,430 + -1.8
4,095,544 - MPMX20_03886 0.22 -0.7
4,095,544 - MPMX20_03886 0.22 -0.2
4,095,576 - MPMX20_03886 0.26 +0.3
4,095,590 + MPMX20_03886 0.28 -0.4
4,095,671 + MPMX20_03886 0.38 -1.6
4,095,679 - MPMX20_03886 0.39 -0.8
4,095,679 - MPMX20_03886 0.39 +0.3
4,095,693 + MPMX20_03886 0.41 -0.7
4,095,706 - MPMX20_03886 0.43 -0.4
4,095,708 - MPMX20_03886 0.43 -2.1
4,095,708 - MPMX20_03886 0.43 -2.8
4,095,708 - MPMX20_03886 0.43 -2.8
4,095,708 - MPMX20_03886 0.43 -0.3
4,095,717 + MPMX20_03886 0.44 -1.0
4,095,719 + MPMX20_03886 0.44 -0.5
4,095,719 + MPMX20_03886 0.44 -0.1
4,095,719 + MPMX20_03886 0.44 -1.4
4,095,719 + MPMX20_03886 0.44 +0.0
4,095,727 - MPMX20_03886 0.45 -1.6
4,095,727 - MPMX20_03886 0.45 -0.6
4,095,727 - MPMX20_03886 0.45 -0.2
4,095,727 - MPMX20_03886 0.45 +0.8
4,095,727 - MPMX20_03886 0.45 +0.8
4,095,737 - MPMX20_03886 0.47 +0.4
4,095,896 - MPMX20_03886 0.67 +1.1
4,095,939 - MPMX20_03886 0.73 +0.5
4,095,946 + MPMX20_03886 0.74 -0.6
4,095,956 + MPMX20_03886 0.75 +0.4
4,095,964 - MPMX20_03886 0.76 -0.6
4,095,978 - MPMX20_03886 0.78 -0.3
4,095,993 - MPMX20_03886 0.80 -0.8
4,096,004 + MPMX20_03886 0.81 +1.4
4,096,020 + MPMX20_03886 0.83 +0.1
4,096,032 + MPMX20_03886 0.85 +0.3
4,096,074 + -1.7
4,096,108 + +0.7
4,096,122 - +0.5
4,096,141 - -0.1
4,097,154 - +0.3
4,097,170 + +0.9
4,097,185 + -0.1
4,097,193 - -1.4
4,097,213 + -0.7
4,097,291 + MPMX20_03888 0.16 -0.6
4,097,560 - -0.1
4,097,573 + +0.2
4,097,581 - -0.7
4,097,581 - -0.3
4,097,588 - +0.7
4,097,656 - -1.0

Or see this region's nucleotide sequence